Publications by authors named "Xiangyi Yu"

Article Synopsis
  • Extreme myopia (EM) is a serious cause of vision loss, defined as having a spherical equivalent of -10.00 diopters or worse, and current genetic knowledge about it is limited.
  • Researchers conducted whole-exome sequencing on 449 individuals with EM compared to 9,606 controls, finding an excess of rare protein-truncating variants linked to a specific cellular transport pathway.
  • Using advanced sequencing techniques, they identified specific fibroblasts (PI16+/SFRP4+) as crucial in understanding EM, and the study revealed that the gene KDELR3 plays a significant role in eye structure, influencing the development of elongated eyes in a zebrafish model.
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Importance: High myopia (HM) is one of the leading causes of visual impairment worldwide. Genetic factors are known to play an important role in the development of HM.

Objective: To identify risk variants in a large HM cohort and to examine the implications of genetic testing of schoolchildren with HM.

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High myopia (HM) is one of the leading causes of visual impairment and blindness worldwide. Here, we report a whole-exome sequencing (WES) study in 9,613 HM cases and 9,606 controls of Han Chinese ancestry to pinpoint HM-associated risk variants. Single-variant association analysis identified three newly identified -genetic loci associated with HM, including an East Asian ancestry-specific low-frequency variant (rs533280354) in FKBP5.

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Exposure to antibiotics can result in not only ecotoxicity on aquatic organisms but also the development of antibiotic resistance. In the study, the ecotoxicity data and minimum inhibitory concentrations of the antibiotics were screened to derive predicted no-effect concentrations of ecological (PNEC) and resistance development risks (PNEC) for 36 antibiotics in fresh surface waters of China. The derived PNEC and PNEC values were ranged from 0.

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Background: Ocular diseases may exhibit common clinical symptoms and epidemiological comorbidity. However, the extent of pleiotropic mechanisms across ocular diseases remains unclear. We aim to examine shared genetic etiology in age-related macular degeneration (AMD), diabetic retinopathy (DR), glaucoma, retinal detachment (RD), and myopia.

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The ecological risks of nonylphenol (NP) and tetrabromobisphenol A (TBBPA) have received continued attention owing to their large consumption, frequently detection, adverse effects on the reproductive fitness, and lack of risk assessment technical systems. The geometric mean of the median concentrations of NP in the 22 surface waters was 0.278 μg/L, and TBBPA in the seven surface waters was 0.

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Effluents of sewage treatment plants (STPs) are an important source of estrogenic substances to the receiving water bodies affecting their ecological safety. In this study, steroids, bisphenol A (BPA) and phthalates were assessed in the secondary (SE) and tertiary effluent (TE) of three typical urban STPs in Beijing (China). In addition, the overall estrogenic activity in these effluents was assessed by an in-vitro bioassay (ERE-CALUX).

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A sedimentary record of the 16 polycyclic aromatic hydrocarbon (PAH) pollutants from Dongping Lake, north China, is presented in this study. The influence of regional energy structure changes for 2-6-ring PAHs was investigated, in order to assess their sources and the impact of socioeconomic developments on the observed changes in concentration over time. The concentration of the ΣPAH ranged from 77.

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Eye diseases are remarkably common and encompass a large and diverse range of morbidities that affect different components of the visual system and visual function. With advances in omics technology of eye disorders, genome-scale datasets have been rapidly accumulated in genetics and epigenetics field. However, the efficient collection and comprehensive analysis of different kinds of omics data are lacking.

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Background: Major depressive disorder (MDD) is a common mental illness characterized by persistent sadness and a loss of interest in activities. Using smartphones and wearable devices to monitor the mental condition of patients with MDD has been examined in several studies. However, few studies have used passively collected data to monitor mood changes over time.

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A city's in-use stock comprises the built environment and manufactured products, which shape a city's weight and play vital roles in human activities. However, researchers have not accurately quantified urban weight and its composition, or how stock types change during urbanization. We quantified Beijing's in-use stock from 1978 to 2015 by bottom-up material-flow analysis for building, infrastructure, and manufactured product stocks, with 11 sub-types (e.

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Massive resource and energy consumption greatly increase a city's domestic material consumption (its "weight"), resulting in proportionally large pressure on the environment. Understanding the causes and driving forces behind urban weight can therefore promote more sustainable urban development. To improve our understanding, we analyzed the composition of Beijing's urban weight from 2000 to 2015.

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During the 50 years since the concept of urban metabolism was proposed, this field of research has evolved slowly. On the basis of an analogy with an organism's metabolism, the concept of urban metabolism has become an effective method to evaluate the flows of energy and materials within an urban system, thereby providing insights into the system's sustainability and the severity of urban problems such as excessive social, community, and household metabolism at scales ranging from global to local. Researchers have improved this approach, evolving from models of linear to cyclic processes and then to network models.

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