Publications by authors named "Xianghe Zeng"
[Advances in bioinformatics-based protein function prediction].
Sheng Wu Gong Cheng Xue Bao
July 2024
Article Synopsis
- The rise in computer power and biological data has made bioinformatics essential for solving biological issues, particularly in drug discovery and biomedical research.
- This paper classifies protein function prediction methods into three main types: sequence-based, structure-based, and interaction networks-based.
- It analyzes recent advancements in these algorithms, offering insights and references for applying bioinformatics in protein function prediction.
Background: Activated sludge (AS) systems in wastewater treatment plants (WWTPs) harbor enormous viruses that regulate microbial metabolism and nutrient cycling, significantly influencing the stability of AS systems. However, our knowledge about the diversity of viral taxonomic groups and functional traits in global AS systems is still limited. To address this gap, we investigated the global diversity and biogeography of DNA viral communities in AS systems using 85,114 viral operational taxonomic units (vOTUs) recovered from 144 AS samples collected across 54 WWTPs from 13 different countries.
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