Publications by authors named "Xiang-dong Li"

Article Synopsis
  • - Inhalable microorganisms, including bacteria and phages found in fine particulate matter (PM), are significant carriers of antibiotic resistance genes (ARGs) that can affect urban health, particularly in relation to the lung microbiome.
  • - A metagenomic study conducted in various Chinese cities shows seasonal changes in phage communities in PM, revealing that these phages can impact important ARGs, with a notable connection to potential bacterial pathogens.
  • - Phage profiles carrying ARGs vary among urban locations, showing increased abundance and diversity in winter and spring, while environmental factors like wind speed and UV levels contribute significantly to these seasonal variations.
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Article Synopsis
  • The study explores how plant resistance affects viral fitness and leads to the emergence of resistance-breaking strains, particularly in potyviruses like the papaya ringspot virus (PRSV).
  • The research identifies specific mutations in the VPg protein of PRSV that allow it to evade interaction with the primary resistance factor, eIF4E, while instead engaging with a different version called eIF(iso)4E.
  • The findings highlight potential targets for breeding watermelon plants that can resist these newly adapted viral strains, enhancing crop protection.
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Stress granules (SGs) are non-membranous organelles composed of mRNA and proteins that assemble in the cytosol when the cell is under stress. Although the composition of mammalian SGs is both cell-type and stress-dependent, they consistently contain core components, such as Ras GTPase activating protein SH3 domain binding protein 1 (G3BP1). Upon stress, living cells rapidly assemble micrometric SGs, sometimes within a few minutes, suggesting that SG components may be actively transported by the microtubule and/or actin cytoskeleton.

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Article Synopsis
  • Transporting melanosomes in melanocytes relies on myosin-5a (Myo5a), which connects to melanosome through an adaptor protein called melanophilin (Mlph).
  • Mlph has four distinct regions that facilitate its interaction with Myo5a, specifically involving Rab27a, Myo5a's GTD, exon F, and actin-binding domains.
  • A newly identified interaction between the exon-G region of Myo5a and Mlph's actin-binding domain is critical for melanosome transport, adding a new layer to our understanding of how Myo5a and Mlph work together in this process.
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Viruses employ a series of diverse translational strategies to expand their coding capacity, which produces viral proteins with common domains and entangles virus-host interactions. P3N-PIPO, which is a transcriptional slippage product from the cistron, is a potyviral protein dedicated to intercellular movement. Here, we show that P3N-PIPO from watermelon mosaic virus (WMV) triggers cell death when transiently expressed in accession PI 414723 carrying the resistance gene.

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Tobacco (Nicotiana tabacum) is one of the major cash crops in China. Potato virus Y (PVY), a representative member of the genus Potyvirus, greatly reduces the quality and yield of tobacco leaves by inducing veinal necrosis. Mild strain-mediated cross-protection is an attractive method of controlling diseases caused by PVY.

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Myosin light chain kinase (MLCK) is a dedicated kinase of myosin regulatory light chain (RLC), playing an essential role in the regulation of muscle contraction and cell motility. Much of the knowledge about MLCK comes from the study of vertebrate MLCK, and little is known about insect MLCK. Here, we identified the single MLCK gene in the locust Locusta migratoria, which spans over 1400 kb, includes 62 exons and accounts for at least five transcripts.

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Cellular vesicle long-distance transport along the cytoplasmic actin network has recently been uncovered in several cell systems. In metaphase mouse oocytes, the motor protein myosin-5b (Myo5b) and the actin nucleation factor Spire are recruited to the Rab11a-positive vesicle membrane, forming a ternary complex of Myo5b/Spire/Rab11a that drives the vesicle long-distance transport to the oocyte cortex. However, the mechanism underlying the intermolecular regulation of the Myo5b/Spire/Rab11a complex remains unknown.

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Eukaryotic translation initiation factor 4E (eIF4E), which plays a pivotal role in initiating translation in eukaryotic organisms, is often hijacked by the viral genome-linked protein to facilitate the infection of potyviruses. In this study, we found that the naturally occurring amino acid substitution D71G in eIF4E is widely present in potyvirus-resistant watermelon accessions and disrupts the interaction between watermelon eIF4E and viral genome-linked protein of papaya ringspot virus-watermelon strain, zucchini yellow mosaic virus or watermelon mosaic virus. Multiple sequence alignment and protein modelling showed that the amino acid residue D located in the cap-binding pocket of eIF4E is strictly conserved in many plant species.

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Background: The common carp (Cyprinus carpio) might best represent the domesticated allopolyploid animals. Although subgenome divergence which is well-known to be a key to allopolyploid domestication has been comprehensively characterized in common carps, the link between genetic architecture underlying agronomic traits and subgenome divergence is unknown in the selective breeding of common carps globally.

Results: We utilized a comprehensive SNP dataset in 13 representative common carp strains worldwide to detect genome-wide genetic variations associated with scale reduction, vibrant skin color, and high growth rate in common carp domestication.

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14-3-3 proteins play vital roles in plant defense against various pathogen invasions. To date, how 14-3-3 affects virus infections in plants remains largely unclear. In this study, we found that Nicotiana benthamiana 14-3-3h interacts with TRANSLATIONALLY CONTROLLED TUMOR PROTEIN (TCTP), a susceptibility factor of potato virus Y (PVY).

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Locust (Locusta migratoria) has a single striated muscle myosin heavy chain (Mhc) gene, which contains 5 clusters of alternative exclusive exons and 1 differently included penultimate exon. The alternative exons of Mhc gene encode 4 distinct regions in the myosin motor domain, that is, the N-terminal SH3-like domain, one lip of the nucleotide-binding pocket, the relay, and the converter. Here, we investigated the role of the alternative regions on the motor function of locust muscle myosin.

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The significance of 5-methylcytosine (mC) methylation in human malignancies has become an increasing focus of investigation. Here, we show that mC regulators including writers, readers and erasers, are predominantly upregulated in urothelial carcinoma of the bladder (UCB) derived from Sun Yat-sen University Cancer Center and The Cancer Genome Atlas cohort. In addition, NOP2/Sun RNA methyltransferase family member 2 (NSUN2) as a methyltransferase and Aly/REF export factor (ALYREF) as a nuclear mC reader, are frequently coexpressed in UCB.

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Crop residue retention and fertilizer application are the main sources of soil nutrient input in fields. Crop residue retention combined with appropriate fertilizer application rates could provide necessary nutrients for crop production under the premise of environmentally friendly conditions. The aim of this study was to clarify the influence of different topdressing nitrogen rates on the soil fungal community in a wheat field under crop residue retention and to evaluate the rationality of nitrogen fertilizer management in winter wheat from the perspective of soil ecological function.

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Objective: The pandemic of COVID-19 continues to challenge people's health worldwide. In the second year of the pandemic, adherence to COVID-19 preventive behavior is key to continuing efforts to overcome the epidemic. This study aims to assess the COVID-19-related knowledge, attitude, and prevention behavior (KAP) and electronic health literacy (eHealth literacy) among Anhui residents in China.

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Article Synopsis
  • Evaluating various crop rotation patterns can enhance ecological sustainability and crop productivity.
  • Different crops like summer peanut and soybean were tested, showing diverse effects on soil nutrients and bacterial communities.
  • Summer soybean rotations notably improved the yield and weight of succeeding winter wheat compared to summer maize rotations.
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Insect Sf9 cells are widely used for producing recombinant proteins, including myosin. It is expected that the protein folding machinery in Sf9 cells can meet the requirement for the proper folding of exogenous myosin. Of interest is that not all class II myosins are expressed functionally in Sf9 cells.

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Airborne bacteria are an influential component of the Earth's microbiomes, but their community structure and biogeographic distribution patterns have yet to be understood. We analyzed the bacterial communities of 370 air particulate samples collected from 63 sites around the world and constructed an airborne bacterial reference catalog with more than 27 million nonredundant 16S ribosomal RNA (rRNA) gene sequences. We present their biogeographic pattern and decipher the interlacing of the microbiome co-occurrence network with surface environments of the Earth.

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Using peanut cultivar Huayu 25 and cotton cultivar Liaomian 19 as experimental material, we examined the effects of different intercropping patterns on physiological characteristics of peanut in later growth stage, yield and economic benefit, based on an experiment with five treatments, including intercropping modes of 4 rows peanut and 4 rows cotton (HM), 6 rows peanut and 4 rows cotton (HM), 4 rows peanut and 4 rows cotton (HM), sole peanut (DH) and sole cotton (DM). The results showed that intercropping mode increased the length of main stem and branches of peanut, but decreased green leaves number of main steam, leaf area index, and total dry matter accumulation. Among the intercropping modes, chlorophyll content, chlorophyll fluorescence parameters, root vigor, nitrate reductase activity under HM and HM were significantly higher than that under HM, as well as higher superoxide dismutase, peroxidase, catalase activity and decreased malondialdehyde content.

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Article Synopsis
  • The text indicates that there is a correction to a previously published article.
  • The DOI (Digital Object Identifier) for the original article is 10.3389/fpls.2021.788963.
  • The correction likely aims to address errors or clarify information in the original publication.
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In order to examine the effects of temperature on the growth, survival, and reproduction of (Lepidoptera: Crambidae) feeding on corn kernels, the life table parameters of at 21, 24, 27, 30 ℃ were calculated based on the age-stage two-sex life table theory, and then population dynamics of was projected based on these parameters. The results showed that the life cycles of the pest could be finished at all the four temperature treatments. The developmental duration of each stage shortened with increasing temperature, and there were significant differences among treatments.

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