Fine sediment-associated contaminants in gravel bed rivers: Evaluating storage times and turnover using fallout radionuclides (FRNs).

Excess fine sediment supply and its associated contaminants can have detrimental effects on water quality and river ecology with sediment deposition on, and subsequent infiltration in, streambeds impacting riverine habitats. Fallout radionuclides (FRNs) are used as tracers in aquatic systems, and the Be/Pb ratio is a useful indicator for sediment residence/storage time. Suspended and submerged mid-channel bar sediments were collected during five surveys within a 5 km reach of a typical temperate lowland agricultural river system.

Tracing the trail of eroded fertile soils during a high intensity rainfall event: A fingerprinting study in war-torn tropical mountains.

The depletion of fertile topsoil presents a critical challenge in tropical mountain agroecosystems. Impacts are intensified during heavy storm events that strip unprotected topsoils and pose risks to downstream water ecosystems. To better understand such dynamics, we investigated an agricultural mountainous catchment located on the Democratic Republic of the Congo shore of Lake Kivu.

Anthropogenic and climatic impacts on historic sediment, carbon, and phosphorus accumulation rates using Pb and Cs in a sub-watershed linked to Zarivar Lake, Iran.

To estimate a watershed's response to climate change, it is crucial to understand how human activities and climatic extremes have interacted over time. Over the last century, the Zarivar Lake watershed, Iran, has been subjected to various anthropogenic activates, including deforestation and inappropriate land-management practices alongside the implementation of conservation measures like check dams. To understand the effects of these changes on the magnitude of sediment, organic carbon (OC), and phosphorus supplies in a small sub-watershed connected to the lake over the last century, a lake sediment core was dated using Pb and Cs as geochronometers.

Accumulation of Environmental Radioactivity on the Surface of a High Arctic Ice Cap (Flade Isblink, NE Greenland).

Under climatic warming, glaciers are becoming a secondary source of atmospheric contaminants originally released into the environment decades ago. This phenomenon has been well-documented for glaciers near emission sources. However, less is known about polar ice sheets and ice caps.

Plutonium isotopes can be used to model soil erosion in Kenya.

Climate change poses an immediate threat to tropical soils with changes in rainfall patterns resulting in accelerated land degradation processes. To ensure the future sustainability of arable land, it is essential to improve our understanding of the factors that influence soil erosion processes. This work aimed to evaluate patterns of soil erosion using the activity of plutonium isotopes (Pu) at sites with different land use and clearance scale in the Winam Gulf catchment of Lake Victoria in Kenya.

Organic carbon accumulation in British saltmarshes.

Saltmarshes are a crucial component of the coastal carbon (C) system and provide a natural climate regulation service through the accumulation and long-term storage of organic carbon (OC) in their soils. These coastal ecosystems are under growing pressure from a changing climate and increasing anthropogenic disturbance. To manage and protect these ecosystems for C and to allow their inclusion in emissions and natural-capital accounting, as well as carbon markets, accurate and reliable estimates of OC accumulation are required.

Basin scale sources of siltation in a contaminated hydropower reservoir.

Siltation and the loss of hydropower reservoir capacity is a global challenge with a predicted 26 % loss of storage at the global scale by 2050. Like in many other Latin American contexts, soil erosion constitutes one of the most significant water pollution problems in Chile with serious siltation consequences downstream. Identifying the sources and drivers affecting hydropower siltation and water pollution is a critical need to inform adaptation and mitigation strategies especially in the context of changing climate regimes e.

Detection of viral RNAs at ambient temperature via reporter proteins produced through the target-splinted ligation of DNA probes.

Nucleic acid assays are not typically deployable in point-of-care settings because they require costly and sophisticated equipment for the control of the reaction temperature and for the detection of the signal. Here we report an instrument-free assay for the accurate and multiplexed detection of nucleic acids at ambient temperature. The assay, which we named INSPECTR (for internal splint-pairing expression-cassette translation reaction), leverages the target-specific splinted ligation of DNA probes to generate expression cassettes that can be flexibly designed for the cell-free synthesis of reporter proteins, with enzymatic reporters allowing for a linear detection range spanning four orders of magnitude and peptide reporters (which can be mapped to unique targets) enabling highly multiplexed visual detection.

Real-Time, Multiplexed SHERLOCK for in Vitro Diagnostics.

The pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has highlighted the need for simple, low-cost, and scalable diagnostics that can be widely deployed for rapid testing. Clustered regularly interspaced short palindromic repeats (CRISPR)-based diagnostics have emerged as a promising technology, but its implementation in clinical laboratories has been limited by the requirement of a separate amplification step prior to CRISPR-associated (Cas) enzyme-based detection. This article reports the discovery of two novel Cas12 enzymes (SLK9 and SLK5-2) that exhibit enzymatic activity at 60°C, which, when combined with loop-mediated isothermal amplification (LAMP), enable a real-time, single-step nucleic acid detection method [real-time SHERLOCK (real-time SLK)].

Distribution and storage of uranium, and its decay products, in floodplain sediments.

Industrialised rivers contain legacy contaminants stored in their sediments and floodplain soils which may inhibit attainment of environmental quality criteria. The River Fal catchment, SW England, is impacted by inputs from uranium mining and clay production and serves as an exemplar for understanding the consequences of medium-term process dynamics in contaminated basins. Radionuclides were determined, by gamma spectroscopy, in six cores from the river floodplain with the aim of quantifying the activities of U, and its decay products, and the bomb fallout radionuclidesCs and Am.

Non-operative adjuncts for the prevention of mastectomy skin flap necrosis: a systematic review and meta-analysis.

Background: Native skin flap necrosis is a potentially devastating complication following skin-sparing or nipple-sparing mastectomy with a reported incidence of as high as 30%. Treatment depends on the depth and extent of tissue necrosis and can range from dressings to surgical debridement and further reconstruction. This can have implications on patient physical and psychological wellbeing as well as cost of treatment.

Nucleocapsid Antigenemia in Patients Receiving Anti-CD20 Therapy With Protracted COVID-19.

Immunocompromised patients with prolonged coronavirus disease 2019 symptoms present diagnostic and therapeutic challenges. We measured viral nucleocapsid antigenemia in 3 patients treated with anti-CD20 immunotherapy who acquired severe acute respiratory syndrome coronavirus 2 infection and experienced protracted symptoms. Our results support nucleocapsid antigenemia as a marker of persistent infection and therapeutic response.

Microscale spatial variability of Beryllium-7 at a reference site in southwest China.

Quantitative assessment of soil erosion and deposition rates using fallout radionuclides (FRNs), including Beryllium-7 (Be), requires establishment of a reliable reference inventory i.e. the inventory of a non-eroding point.

Composition of deposited sediment and its temporal variation in a disturbed tropical catchment in the Kelantan river basin, Peninsular Malaysia.

Pristine tropical river systems are coming under increasing pressure from the development of economic resources such as forestry and mining for valuable elements. The Lebir catchment, north eastern Malaysia, is now under development as a result of unregulated tree felling and mining for essential and rare metals. Two sediment cores, one in the upstream reaches and the other from the downstream reaches, were taken from flood prone area of the Lebir River, Malaysia, and analysed for their elemental composition by XRF, specifically Al, Si, Fe, Ca, K, Mg, Mn, V, Cu, Ni, Pb, Cr, Zn, As, Th and U.

High-Throughput CRISPR-Cas13 SARS-CoV-2 Test.

Background: The ability to control the spread of COVID-19 continues to be hampered by a lack of rapid, scalable, and easily deployable diagnostic solutions.

Methods: We developed a diagnostic method based on CRISPR (clustered regularly interspaced short palindromic repeats) that can deliver sensitive, specific, and high-throughput detection of Sudden Acute Respiratory Syndrome-Coronavirus-2 (SARS-CoV-2). The assay utilizes SHERLOCK (Specific High-sensitivity Enzymatic Reporter unLOCKing) for the qualitative detection of SARS-CoV-2 RNA and may be performed directly on a swab or saliva sample without nucleic acid extraction.

Soil fertility and land sustainability in Usangu Basin-Tanzania.

Soil fertility determines crop growth, productivity and consequently determines land productivity and sustainability. Continuous crop production exploits plant nutrients from soils leading to plant nutrient imbalance, thus affecting soil productivity. This study was conducted to monitor soil fertility status in soils of Usangu agro-ecosystem to establish management strategies.

Land use patterns influence the distribution of potentially toxic elements in soils of the Usangu Basin, Tanzania.

Spatial distribution of Potentially Toxic Elements (PTEs) in agricultural soils in Usangu Basin (Mbeya Region)-Tanzania were conducted. The study included three land-use types (paddy farming, maize farming, and conserved community forest areas). About 198 soil samples were collected from November to December 2019 across contrasting land management schemes (Group I dominated by agricultural areas versus Group II dominated by residential and agricultural areas).

Accumulation and bioconcentration of heavy metals in two phases from agricultural soil to plants in Usangu agroecosystem-Tanzania.

The build-up of heavy metals (HM) in agricultural soils accelerates the HM uptake by plants, which could potentially affect food quality and food safety. Here we studied the status and bioaccumulation of HM from soils to plant parts (roots, stem, and grains) in Usangu agro-ecosystem-Tanzania. In total 68 soil samples and 42 rice plant samples from six irrigation schemes were studied.

Evaluating the effectiveness of soil conservation at the basin scale using floodplain sedimentary archives.

Evaluation of the spatial and temporal composition of floodplain sediments and soils is critical in the creation of soil management strategies for impacted riverine catchments. The objective of this study was to determine the distribution, and to identify the sources, of particulate trace elements and fallout radionuclides in the catchment of the River Avon (SW England), where sedimentary processes had been altered by reservoir construction in the 1950s. The catchment was compartmentalized into its main functional units namely, cultivated land, pasture, woodland, wet moorland, and channel bank.

Assessment of arsenic status and distribution in Usangu agro-ecosystem-Tanzania.

This study was conducted to assess arsenic (As) status and distribution in Usangu agroecosystem-Tanzania, including three land use. About 198 soil samples were collected in ten irrigation schemes in three land uses. Total and bioavailable As were determined by acid digestion (Aqua regia (AQ)) and Mehlich 3 method (M3) to estimate status, distribution and bioavailability.