Publications by authors named "William B Perry"

Background: Prisons are high-risk settings for the transmission of communicable disease. Robust surveillance systems are required to identify and control outbreaks. Wastewater surveillance for SARS-CoV-2 was introduced in four prisons in Wales in March 2022.

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Wastewater-based epidemiology (WBE) is a crucial tool for health and environmental monitoring, providing real-time data on public health indicators by analysis of sewage samples. Ensuring the integrity of these samples from collection to analysis is paramount. This study investigates the effects of different cold-storage conditions on the integrity of wastewater samples, focusing on both microbiological markers (such as extractable nucleic acids, SARS-CoV-2, and crAssphage) and physicochemical parameters (including ammonium, orthophosphate, pH, conductivity, and turbidity).

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Article Synopsis
  • - Wastewater contains significant information about antimicrobial resistance (AMR), and studying it can help inform public health policies, as seen in a comparative study of two screening methods for tracking AMR in Wales.
  • - The study compared high-throughput quantitative PCR (HT qPCR), which focused on 73 specific resistance genes, with metagenomic sequencing, which identified a broader range of 545 resistance genes and provided important context about potential bacterial hosts.
  • - While metagenomics offered a detailed overview of the resistome, HT qPCR was better at detecting and quantifying low-abundance genes relevant to clinical resistance; both methods showed similar trends related to environmental factors influencing AMR.
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Article Synopsis
  • * The study examined how well different types of wastewater samples preserve the genetic material of various viruses under various storage conditions, finding that certain genes, like the Spike (S) gene of SARS-CoV-2, are less stable during freeze-thaw cycles compared to others.
  • * Results indicated that storing raw wastewater samples at 4 °C optimally preserves SARS-CoV-2, while a laboratory comparison showed that Phi6 phage serves well as a stable surrogate for studying SARS-CoV-2, with minimal degradation
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Anthropogenically forced changes in global freshwater biodiversity demand more efficient monitoring approaches. Consequently, environmental DNA (eDNA) analysis is enabling ecosystem-scale biodiversity assessment, yet the appropriate spatio-temporal resolution of robust biodiversity assessment remains ambiguous. Here, using intensive, spatio-temporal eDNA sampling across space (five rivers in Europe and North America, with an upper range of 20-35 km between samples), time (19 timepoints between 2017 and 2018) and environmental conditions (river flow, pH, conductivity, temperature and rainfall), we characterise the resolution at which information on diversity across the animal kingdom can be gathered from rivers using eDNA.

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Article Synopsis
  • * The study examines the experience of monitoring SARS-CoV-2 in São Paulo, Brazil, and Wales, UK, focusing on design, laboratory methods, and data analysis while identifying shared regional challenges.
  • * It emphasizes the need for an ideal wastewater surveillance program free from resource constraints and the benefits of combining diverse skills and international collaboration for effective monitoring.
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Europe's ageing wastewater system often combines domestic sewage with surface runoff and industrial wastewaters. To reduce the associated risk of overloading wastewater treatment works during storms, and to prevent wastewater backing-up into properties, Combined Sewer Overflows (CSOs) are designed into wastewater networks to release excess discharge into rivers or coastal waters without treatment. In view of growing regulatory scrutiny and increasing public concern about their excessive discharge frequencies and potential impacts on environments and people, there is a need to better understand these impacts to allow prioritisation of cost-effective solutions.

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Tropical fishkeeping is a popular practice in societies across the globe and involves recreating and sustaining an entire ecosystem in an aquarium within a domestic setting. The process invariably has an environmental impact, yet an assessment of this impact has previously been limited to the ecological consequences of harvesting fish from the wild or the release of non-native fish species. Provided here are the first estimates of carbon dioxide equivalent (CO eq) emissions produced from running a tropical aquarium across multiple countries in Northern Europe (France, Poland and the UK), along with water consumption.

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