Modeling the clonal heterogeneity of stem cells.

Recent experimental studies suggest that tissue stem cell pools are composed of functionally diverse clones. Metapopulation models in ecology concentrate on collections of populations and their role in stabilizing coexistence and maintaining selected genetic or epigenetic variation. Such models are characterized by expansion and extinction of spatially distributed populations.

Memes and their themata.

When it is instantiated as a neuronal state, a meme is characterized as a phenotype in a novel neuronal sense. A thema is an instantiation of a meme as a conscious experience (a thought-meme). It is a primitive to which no location may be attributed, and it serves as a canonical representative of a class of memes.

Apoptosis, neurogenesis, and information content in Hebbian networks.

The functional significance of alternate forms of plasticity in the brain (such as apoptosis and neurogenesis) is not easily observable with biological methods. Employing Hebbian dynamics for synaptic weight development, a three-layer neural network model of the hippocampus is used to simulate nonsupervised (autonomous) learning in the context of apoptosis and neurogenesis. This learning is applied to the characters of a pair of related alphabets, first the Roman and then the Greek, resulting in a set of encodings endogenously developed by the network.

Simulated apoptosis/neurogenesis regulates learning and memory capabilities of adaptive neural networks.

Characterization of neuronal death and neurogenesis in the adult brain of birds, humans, and other mammals raises the possibility that neuronal turnover represents a special form of neuroplasticity associated with stress responses, cognition, and the pathophysiology and treatment of psychiatric disorders. Multilayer neural network models capable of learning alphabetic character representations via incremental synaptic connection strength changes were used to assess additional learning and memory effects incurred by simulation of coordinated apoptotic and neurogenic events in the middle layer. Using a consistent incremental learning capability across all neurons and experimental conditions, increasing the number of middle layer neurons undergoing turnover increased network learning capacity for new information, and increased forgetting of old information.