Publications by authors named "Wanting Cui"

The goal of this study was to analyze diagnostic discrepancies between emergency department (ED) and hospital discharge diagnoses in patients with congestive heart failure admitted to the ED. Using a synthetic dataset from the Department of Veterans Affairs, the patients' primary diagnoses were compared at two levels: diagnostic category and body system. With 12,621 patients and 24,235 admission cases, the study found a 58% mismatch rate at the category level, which was reduced to 30% at the body system level.

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Multiple myeloma (MM) is one of the most common hematological malignancies. The goal of this study was to analyze the sociodemographic, economic, and genetic characteristics of long-term and short-term survival of multiple myeloma patients using EHR data from an academic medical center in New York City. The de-identified analytical dataset comprised 2,111 patients with MM who were stratified based on the length of survival into two groups.

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This research aimed to develop a model for real-time prediction of aerobic exercise exertion levels. ECG signals were registered during 16-minute cycling exercises. Perceived ratings of exertion (RPE) were collected each minute from the study participants.

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This study aims to develop machine learning (ML) algorithms to predict exercise exertion levels using physiological parameters collected from wearable devices. Real-time ECG, oxygen saturation, pulse rate, and revolutions per minute (RPM) data were collected at three intensity levels during a 16-minute cycling exercise. Parallel to this, throughout each exercise session, the study subjects' ratings of perceived exertion (RPE) were gathered once per minute.

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Background: Integrative Chinese and Western medicine (ICWM) is commonly used for the treatment of ulcerative colitis (UC) in clinical practice. However, it is unclear whether the details of ICWM interventions, such as selection rationale, implementation design, and potential interactions, were adequately reported. Therefore, this study aimed to assess the quality of reporting in the ICWM interventional randomized controlled trials (RCTs) of UC and to identify the common problems if any.

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Opioid addiction is a serious public health problem in the US, and this study aimed to explore how natural language processing (NLP) can be used to identify factors that contribute to distress in individuals with opioid addiction, and then use this information along with structured data to predict the outcome of opioid treatment programs (OTP). The study analyzed medical records data and clinical notes of 1,364 patients, out of which 136 succeeded in the program and 1,228 failed. The results showed that several factors influenced the success of patients in the program, including sex, race, education, employment, secondary substance, tobacco use, and type of residences.

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The real-time revolutions per minute (RPM) data, ECG signal, pulse rate, and oxygen saturation levels were collected during 16-minute cycling exercises. In parallel, ratings of perceived exertion (RPE) were collected each minute from the study participants. A 2-minute moving window, with one minute shift, was applied to each 16-minute exercise session to divide it into a total of fifteen 2-minute windows.

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Article Synopsis
  • The study focused on creating machine learning algorithms to classify cycling exercise exertion levels using data from wearable devices.
  • The minimum redundancy maximum relevance algorithm (mRMR) was used to select the most effective features for the classification.
  • Among five machine learning classifiers tested, the Naïve Bayes classifier achieved the highest accuracy with an F1 score of 79%, indicating potential for real-time monitoring of exercise intensity.
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Purpose: This paper focuses on developing and testing three versions of interactive bike (iBikE) interfaces for remote monitoring and control of cycling exercise sessions to promote upper and lower limb rehabilitation.

Methods: Two versions of the system, which consisted of a portable bike and a tablet PC, were designed to communicate through either Bluetooth low energy (BLE) or Wi-Fi interfaces for real-time monitoring of exercise progress by both the users and their clinical team. The third version of the iBikE system consisted of a motorized bike and a tablet PC.

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Background: Telerehabiliation has been shown to have great potential in expanding access to rehabilitation services, enhancing patients' quality of life, and improving clinical outcomes. Stationary biking exercise can serve as an effective aerobic component of home-based physical rehabilitation programs. Remote monitoring of biking exercise provides necessary safeguards to ensure exercise adherence and safety in patients' homes.

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Potential of natural language processing (NLP) in extracting patient's information from clinical notes of opioid treatment programs (OTP) and leveraging it in development of predictive models has not been fully explored. The goal of this study was to assess potential of NLP in identifying legal, social, mental, medical and family environment-based determinants of distress from clinical narratives of patients with opioid addiction, and then using this information in predicting OTP outcomes. Around 63% of patients reported improvements after completing OTP.

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Background: Prader-Willi syndrome (PWS) is a complex disorder caused by impaired paternally expressed genes on chromosome 15q11-q13. Variable findings have been reported about the phenotypic differences among PWS genetic subtypes.

Methods: A total of 110 PWS patients were diagnosed from 8,572 pediatric patients included from July 2013 to December 2021 by MLPA and MS-MLPA assays.

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No-show visits are a serious problem for healthcare centers. It costs a major hospital over 15 million dollars annually. The goal of this paper was to build machine learning models to identify potential no-show telemedicine visits and to identify significant factors that affect no-show visits.

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With NCATS National COVID Cohort Collaborative (N3C) dataset, we evaluated 14 billion medical records and identified more than 12 million patients tested for COVID-19 across the US. To assess potential disparities in COVID-19 testing, we chose ten US states and then compared each state's population distribution characteristics with distribution of corresponding characteristics from N3C. Minority racial groups were more prevalent in the N3C dataset as compared to census data.

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The aim of this pilot study was to identify social determinants of health (SDH) that affect disparities in cancer survival. A limited dataset was generated by querying electronic medical records (EHR) from an academic medical center in New York City between January 2003 and November 2020. Socio-demographic characteristics that affected survival in 22,096 cancer patients were analyzed using descriptive statistics and logistic regression analyses.

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The goal of this pilot study was to identify significant factors that affect disparities in lung cancer survival. A de-identified dataset was generated by querying electronic health records (EHR) from an academic medical center in New York City between January 2003 and November 2020. Socio-demographic characteristics, cancer stage, and genetic profile were analyzed using logistic regression.

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The goal of this paper was to assess if mortality in COVID-19 positive patients is affected by a history of asthma in anamnesis. A total of 48,640 COVID-19 positive patients were included in our analysis. A propensity score matching was carried out to match each asthma patient with two patients without history of chronic respiratory diseases in one stratum.

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Psychiatric and medical disorders, social and family environment, and legal distress are important determinants of distress that impact the effectiveness of the treatment in opioid treatment program (OTP). This information is not routinely captured in electronic health record, but may be found in clinical notes. This study aims to explore the feasibility and effectiveness of natural language processing (NLP) strategy for identifying legal, social, mental and medical determinates of distress along with emotional pain rooted in family environment from clinical narratives of patients with opioid addiction, and then using this information to find its impact on OTP outcomes.

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During the COVID-19 pandemic, artificial intelligence has played an essential role in healthcare analytics. Scoping reviews have been shown to be instrumental for analyzing recent trends in specific research areas. This paper aimed at applying the scoping review methodology to analyze the papers that used artificial intelligence (AI) models to forecast COVID-19 outcomes.

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The goal of this paper is to apply unsupervised machine learning techniques in order to discover latent clusters in patients who have opioid misuse and also undergone COVID-19 testing. Target dataset has been constructed based on COVID-19 testing results at Mount Sinai Health System and opioid treatment program (OTP) information from New York State Office of Addiction Service and Support (OASAS). The dataset was preprocessed using factor analysis for mixed data (FAMD) method and then K-means algorithm along with elbow method were used to determine the number of optimal clusters.

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The goal of this study was to build a machine learning model for early prostate cancer prediction based on healthcare utilization patterns. We examined the frequency and pattern changes of healthcare utilization in 2916 prostate cancer patients 3 years prior to their prostate cancer diagnoses and explored several supervised machine learning techniques to predict possible prostate cancer diagnosis. Analysis of patients' medical activities between 1 year and 2 years prior to their prostate cancer diagnoses using XGBoost model provided the best prediction accuracy with high F1 score (0.

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Chromosome 15q24 microdeletion is a rare genetic disorder characterized by development delay, facial dysmorphism, congenital malformations, and occasional autism spectrum disorder (ASD). In this study, we identified five cases of 15q24 microdeletion using multiplex ligation-dependent probe amplification (MLPA) technology in a cohort of patients with developmental delay and/or intellectual disability. Two of these five cases had deletions that overlapped with the previously defined 1.

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Rapid increase in adoption of electronic health records in health care institutions has motivated the use of entity extraction tools to extract meaningful information from clinical notes with unstructured and narrative style. This paper investigates the performance of two such tools in automatic entity extraction. In specific, this work focuses on automatic medication extraction performance of Amazon Comprehend Medical (ACM) and Clinical Language Annotation, Modeling and Processing (CLAMP) toolkit using 2014 i2b2 NLP challenge dataset and its annotated medical entities.

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The COVID-19 pandemic changed the landscape of telehealth services. The goal of this paper was to identify demographic groups of patients who have used telemedicine services before and after the start of the pandemic, and to analyze how different demographic groups' telehealth usage patterns change throughout the course of the pandemic. A de-identified study dataset was generated by querying electronic health records at the Mount Sinai Health System to identify all patients.

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