Time-reversible dynamical simulations of nonequilibrium systems exemplify both Loschmidt's and Zermélo's paradoxes. That is, computational time-reversible simulations invariably produce solutions consistent with the Second Law of Thermodynamics (Loschmidt's) as well as in the time (Zermélo's, illustrating Poincaré recurrence). Understanding these paradoxical aspects of time-reversible systems is enhanced here by studying the simplest pair of such model systems.
View Article and Find Full Text PDFThis is our current research perspective on models providing insight into statistical mechanics. It is necessarily personal, emphasizing our own interest in simulation as it developed from the National Laboratories' work to the worldwide explosion of computation of today. We contrast the past and present in atomistic simulations, emphasizing those simple models that best achieve reproducibility and promote understanding.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
April 2014
We use nonequilibrium molecular dynamics to analyze and illustrate the qualitative differences between the one-thermostat and two-thermostat versions of equilibrium and nonequilibrium (heat-conducting) harmonic oscillators. Conservative nonconducting regions can coexist with dissipative heat conducting regions in phase space with exactly the same imposed temperature field.
View Article and Find Full Text PDFStructurally stable atomistic one-dimensional shock waves have long been simulated by injecting fresh cool particles and extracting old hot particles at opposite ends of a simulation box. The resulting shock profiles demonstrate tensor temperature, Txx≠Tyy and Maxwell's delayed response, with stress lagging strain rate and heat flux lagging temperature gradient. Here this same geometry, supplemented by a short-ranged external "plug" field, is used to simulate steady Joule-Kelvin throttling flow of hot dense fluid through a porous plug, producing a dilute and cooler product fluid.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
October 2010
Recently, a new algorithm for the computation of covariant Lyapunov vectors and of corresponding local Lyapunov exponents has become available. Here we study the properties of these still unfamiliar quantities for a simple model representing a harmonic oscillator coupled to a thermal gradient with a two-stage thermostat, which leaves the system ergodic and fully time reversible. We explicitly demonstrate how time-reversal invariance affects the perturbation vectors in tangent space and the associated local Lyapunov exponents.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
April 2010
Guided by molecular dynamics simulations, we generalize the Navier-Stokes-Fourier constitutive equations and the continuum motion equations to include both transverse and longitudinal temperatures. To do so we partition the contributions of the heat transfer, the work done, and the heat flux vector between the longitudinal and transverse temperatures. With shockwave boundary conditions time-dependent solutions of these equations converge to give stationary shockwave profiles.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
July 2009
The anisotropy of temperature is studied here in a strong two-dimensional shock wave, simulated with conventional molecular dynamics. Several forms of the kinetic temperature are considered, corresponding to different choices for the local instantaneous stream velocity. A local particle-based definition omitting any "self"-contribution to the stream velocity gives the best results.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
April 2009
We compare nonlinear stresses and temperatures for adiabatic-shear flows, using up to 262, 144 particles, with those from corresponding homogeneous and inhomogeneous flows. Two varieties of kinetic temperature tensors are compared to the configurational temperatures. This comparison of temperatures led us to two findings beyond our original goal of analyzing shear algorithms.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
March 2009
Many recent papers have questioned Irving and Kirkwood's atomistic expression for stress. In Irving and Kirkwood's approach both interatomic forces and atomic velocities contribute to stress. It is the velocity-dependent part that has been disputed.
View Article and Find Full Text PDFHomogeneous shear flows (with constant strainrate dv(x)/dy) are generated with the Doll's and Sllod algorithms and compared to corresponding inhomogeneous boundary-driven flows. We use one-, two-, and three-dimensional smooth-particle weight functions for computing instantaneous spatial averages. The nonlinear normal-stress differences are small, but significant, in both two and three space dimensions.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
April 2008
We analyze temperature and thermometry for simple nonequilibrium heat-conducting models. We also show in detail, for both two- and three-dimensional systems, that the ideal-gas thermometer corresponds to the concept of a local instantaneous mechanical kinetic temperature. For the phi4 models investigated here the mechanical temperature closely approximates the local thermodynamic equilibrium temperature.
View Article and Find Full Text PDFWe consider and compare four Hamiltonian formulations of thermostated mechanics, three of them kinetic, and the other one configurational. Though all four approaches "work" at equilibrium, their application to many-body nonequilibrium simulations can fail to provide a proper flow of heat. All the Hamiltonian formulations considered here are applied to the same prototypical two-temperature "phi4" model of a heat-conducting chain.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
January 2006
Stable fluid and solid particle phases are essential to the simulation of continuum fluids and solids using smooth particle applied mechanics. We show that density-dependent potentials, such as Phi rho=1/2 Sigma(rho-rho 0)2, along with their corresponding constitutive relations, provide a simple means for characterizing fluids and that special stabilization potentials, with density gradients or curvatures, such as Phi inverted Delta rho=1/2 Sigma(inverted Delta rho)2, not only stabilize crystalline solid phases (or meshes) but also provide a surface tension which is missing in the usual density-dependent-potential approach. We illustrate these ideas for two-dimensional square, triangular, and hexagonal lattices.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
January 2004
Smooth-particle applied mechanics (SPAM) provides several approaches to approximate solutions of the continuum equations for both fluids and solids. Though many of the usual formulations conserve mass, (linear) momentum, and energy, the angular momentum is typically not conserved by SPAM. A second difficulty with the usual formulations is that tensile stress states often exhibit an exponentially fast high-frequency short-wavelength instability, "tensile instability.
View Article and Find Full Text PDFWe study the relative usefulness of static and dynamic boundary conditions as a function of system dimensionality. In one space dimension, dynamic boundaries, with the temperatures and velocities of external mirror-image boundary particles linked directly to temperatures and velocities of interior particles, perform qualitatively better than the simpler static-mirror-image boundary condition with fixed boundary temperatures and velocities. In one space dimension, the Euler-Maclaurin sum formula shows that heat-flux errors with dynamic temperature boundaries vary as h(-4), where h is the range of the smooth-particle weight function w(r
We generalize Benettin's classical algorithm for the computation of the full Lyapunov spectrum to the case of a two-dimensional fluid composed of linear molecules modeled as hard dumbbells. Each dumbbell, two hard disks of diameter sigma with centers separated by a fixed distance d, may translate and rotate in the plane. We study the mixing between these qualitatively different degrees of freedom and its influence on the full set of Lyapunov exponents.
View Article and Find Full Text PDFThe multifractal link between chaotic time-reversible mechanics and thermodynamic irreversibility is illustrated for three simple chaotic model systems: the Baker Map, the Galton Board, and many-body color conductivity. By scaling time, or the momenta, or the driving forces, it can be shown that the dissipative nature of the three thermostated model systems has analogs in conservative Hamiltonian and Lagrangian mechanics. Links between the microscopic nonequilibrium Lyapunov spectra and macroscopic thermodynamic dissipation are also pointed out.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
May 2002
The dynamical instability of many-body systems is best characterized through the time-dependent local Lyapunov spectrum [lambda(j)], its associated comoving eigenvectors [delta(j)], and the "global" time-averaged spectrum [
Phys Rev E Stat Nonlin Soft Matter Phys
February 2001
The authors thermostat a qp harmonic oscillator using the two additional control variables zeta and xi to simulate Gibbs' canonical distribution. In contrast to the motion of purely Hamiltonian systems, the thermostated oscillator motion is completely ergodic, covering the full four-dimensional [q,p,zeta,xi] phase space. The local Lyapunov spectrum (instantaneous growth rates of a comoving corotating phase-space hypersphere) exhibits singularities like those found earlier for Hamiltonian chaos, reinforcing the notion that chaos requires kinetic-as opposed to statistical-study, both at and away from equilibrium.
View Article and Find Full Text PDFPhys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics
November 2000
We study the precision dependence of equilibrium and nonequilibrium phase-space distribution functions for time-reversible dynamical systems simulated with finite, computational precision. The conservative and dissipative cases show different behavior, with substantially reduced period lengths in the dissipative case. The main effect of finite precision is to change the phase-space fraction occupied by the distributions.
View Article and Find Full Text PDFPhys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics
November 1996
Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics
March 1996
Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics
February 1996