Publications by authors named "W K Bakker"

Background: Tumor heterogeneity is a hurdle to effective therapy, as illustrated by the 'mixed responses' frequently seen in immunotherapy-treated patients. Previously, AXL+ tumor cells were identified to be highly resistant to targeted therapy, whereas more differentiated MITF+ tumor cells do respond to RAF and MEK inhibitors.

Patients And Methods: In this study, we analyzed tumor heterogeneity and explored the presence of the previously described AXL+ or MITF+ melanoma subpopulations in metastatic tissues by NanoString gene expression analysis, single-cell RNA sequencing and multiplex immunofluorescence.

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As researchers in global health, we reflect on the inequities in our work and our own struggles with these inequities and suggest some points to consider to address them in future global health work.

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Remote sensing technologies have the potential to support monitoring of floating plastic litter in aquatic environments. An experimental campaign was carried out in a large-scale hydrodynamic test facility to explore the detectability of floating plastics in ocean waves, comparing and contrasting different microwave and optical remote sensing technologies. The extensive experiments revealed that detection of plastics was feasible with microwave measurement techniques using X and Ku-bands with VV polarization at a plastic threshold concentration of 1 item/m or 1-10 g/m.

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Article Synopsis
  • This study investigates how exposure to methylglyoxal (MGO) affects the molecular and biochemical properties of SH-SY5Y human neuroblastoma cells using advanced proteomics and metabolomics techniques.
  • Results show that MGO significantly disrupts cellular functions such as protein synthesis, mitochondrial function, and oxidative stress responses, indicating its neurotoxic effects.
  • Additionally, while MGO exposure causes cellular toxicity and stress, the cells also demonstrate adaptive mechanisms, such as increasing protein synthesis and activating protective pathways, highlighting potential biomarkers for MGO exposure and targets for therapy.
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Nitrogen deposition and climate change have been identified as major threats to the biodiversity of semi-natural grasslands. Their relative contribution to recent biodiversity loss is however not fully understood, and may depend on local site conditions such as soil type, which hampers efforts to prevent further decline. We used data from >900 permanent plots in semi-natural grasslands in Dutch roadsides to investigate whether trends in plant diversity and community composition (2004-2020) could be explained by: (1) nitrogen deposition (NH and NO) and climate change (winter degree days and summer drought), (2) the interactive effect of nitrogen deposition and climate change, and (3) the interactive effect of nitrogen deposition and climate change with soil type.

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