Publications by authors named "Vinicius Salazar"

Article Synopsis
  • - A new bacterial isolate named A520 was discovered from the skin of the bandtail puffer fish in Brazil, characterized as Gram-negative, flagellated, and aerobic, with optimal growth conditions at 25-30 °C and 3% salt.
  • - The genome of A520 has a size of 4.5 Mb, containing 4082 coding genes, and shows high similarity (97.9%) to the bacteria Pseudoalteromonas shioyasakiensis, indicating it may belong to a related lineage.
  • - This novel species, named Pseudoalteromonas simplex sp. nov., exhibits unique phenotypic features and contains gene clusters for bioactive compounds that may relate to the ecological interactions
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Current evidence suggests that macroalgal-dominated habitats are important contributors to the oceanic carbon cycle, though the role of those formed by calcifiers remains controversial. Globally distributed coralline algal beds, built by pink coloured rhodoliths and maerl, cover extensive coastal shelf areas of the planet, but scarce information on their productivity, net carbon flux dynamics and carbonate deposits hampers assessing their contribution to the overall oceanic carbon cycle. Here, our data, covering large bathymetrical (2-51 m) and geographical ranges (53°N-27°S), show that coralline algal beds are highly productive habitats that can express substantial carbon uptake rates (28-1347 g C m day), which vary in function of light availability and species composition and exceed reported estimates for other major macroalgal habitats.

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Recent advances in bioinformatics and high-throughput sequencing have enabled the large-scale recovery of genomes from metagenomes. This has the potential to bring important insights as researchers can bypass cultivation and analyze genomes sourced directly from environmental samples. There are, however, technical challenges associated with this process, most notably the complexity of computational workflows required to process metagenomic data, which include dozens of bioinformatics software tools, each with their own set of customizable parameters that affect the final output of the workflow.

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The rupture of the Córrego do Feijão dam in Brumadinho (January 25, 2019) caused serious damage to the Paraopeba River and compromised the quality of its waters for human consumption. However, the possible effects of the dam collapse on the river microbiome and its antibiotic resistance profiles are unknown. The present study aims to analyse the possible shifts in microbial diversity and enhancement of antibiotic resistance in the Paraopeba River.

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Article Synopsis
  • The manuscript describes a new bacterial strain called A621, characterized as Gram-negative motile rods forming green circular colonies on TCBS, isolated from the skin of the sharpnose pufferfish in Brazil.
  • Optimal growth for A621 occurs at temperatures of 20-28 °C with 3% NaCl, and its genome consists of 4.224 Mb with 4431 coding genes and a G+C content of 44.5%.
  • Genomic analysis classifies A621 as a new species within the Vibrio genus, named Vibrio fluminensis sp. nov., and reveals gene clusters that indicate potential ecological roles in its fish host.
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Sponges are among the earliest lineages of metazoans, with first fossil records dated back to 890 million years ago. All sponge species present associations with microorganisms to some extension, which influence sponges' survival and adaptation. Sponge species can be divided into two categories, Low Microbial Abundance and High Microbial Abundance, depending on the abundance of the microbial community that they host.

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SARS-CoV-2 infects cardiac cells and causes heart dysfunction. Conditions such as myocarditis and arrhythmia have been reported in COVID-19 patients. The Sigma-1 receptor (S1R) is a ubiquitously expressed chaperone that plays a central role in cardiomyocyte function.

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Article Synopsis
  • Madracis decactis, a widely distributed coral species, relies on its relationship with various symbionts to understand its habitat needs and environmental adaptability.
  • This study used advanced phylogenetic analysis to evaluate the symbiont associations of Madracis in the Southwest Atlantic Ocean, revealing a complex interaction rather than a single symbiont association as previously believed.
  • Findings indicate that Madracis can host multiple types of symbionts, enhancing its photosynthetic potential and possibly allowing it to thrive in a variety of environmental conditions.
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  • Synechococcus cyanobacteria are important for global productivity and inhabit various aquatic ecosystems, showing significant metabolic diversity.
  • Recent genomic studies have highlighted a lack of understanding regarding the taxonomic classification of these organisms, prompting the need for a new framework.
  • The proposed classification identifies 15 genera within five orders, emphasizing their ecological and evolutionary relationships based on habitat distribution.
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  • Prochlorococcus is the most common photosynthetic prokaryote, previously thought to be a single genus, Prochlorococcus marinus, which includes various ecotypes.
  • New genomic data has led researchers to classify this group into five distinct genera: Prochlorococcus, Eurycolium, Prolificoccus, Thaumococcus, and Riococcus.
  • Each of these newly identified genera has unique genomic and ecological characteristics that differentiate them from one another.
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