Evaluation of radiochromic gel dosimetry and polymer gel dosimetry in a clinical dose verification.

A quantitative comparison of two full three-dimensional (3D) gel dosimetry techniques was assessed in a clinical setting: radiochromic gel dosimetry with an in-house developed optical laser CT scanner and polymer gel dosimetry with magnetic resonance imaging (MRI). To benchmark both gel dosimeters, they were exposed to a 6 MV photon beam and the depth dose was compared against a diamond detector measurement that served as golden standard. Both gel dosimeters were found accurate within 4% accuracy.

On the validity of 3D polymer gel dosimetry: III. MRI-related error sources.

In MRI (PAGAT) polymer gel dosimetry, there exists some controversy on the validity of 3D dose verifications of clinical treatments. The relative contribution of important sources of uncertainty in MR scanning to the overall accuracy and precision of 3D MRI polymer gel dosimetry is quantified in this study. The performance in terms of signal-to-noise and imaging artefacts was evaluated on three different MR scanners (two 1.

On the validity of 3D polymer gel dosimetry: II. physico-chemical effects.

This study quantifies some major physico-chemical factors that influence the validity of MRI (PAGAT) polymer gel dosimetry: temperature history (pre-, during and post-irradiation), oxygen exposure (post-irradiation) and volumetric effects (experiment with phantom in which a small test tube is inserted). Present results confirm the effects of thermal history prior to irradiation. By exposing a polymer gel sample to a linear temperature gradient of ∼2.

On the validity of 3D polymer gel dosimetry: I. reproducibility study.

The intra- and inter-batch accuracy and precision of MRI (polyacrylamide gelatin gel fabricated at atmospheric conditions) polymer gel dosimeters are assessed in full 3D. In the intra-batch study, eight spherical flasks were filled with the same polymer gel along with a set of test tubes that served as calibration phantoms. In the inter-batch study, the eight spherical flasks were filled with different batches of gel.

19F MRI oximetry: simulation of perfluorocarbon distribution impact.

In (19)F MRI oximetry, a method used to image tumour hypoxia, perfluorocarbons serve as oxygenation markers. The goal of this study is to evaluate the impact of perfluorocarbon distribution and concentration in (19)F MRI oximetry through a computer simulation. The simulation studies the correspondence between (19)F measured (pO(FNMR)(2)) and actual tissue oxygen tension (pO(2)) for several tissue perfluorocarbon distributions.

Radio-physical properties of micelle leucodye 3D integrating gel dosimeters.

Recently, novel radiochromic leucodye micelle hydrogel dosimeters were introduced in the literature. In these studies, gel measured electron depth dose profiles were compared with ion chamber depth dose data, from which it was concluded that leucocrystal violet-type dosimeters were independent of dose rate. Similar conclusions were drawn for leucomalachite green-type dosimeters, only after pre-irradiating the samples to a homogeneous radiation dose.

An oxygen-consuming phantom simulating perfused tissue to explore oxygen dynamics and (19)F MRI oximetry.

Objective: This study presents a reproducible phantom which mimics oxygen-consuming tissue and can be used for the validation of (19)F MRI oximetry.

Materials And Methods: The phantom consists of a haemodialysis filter of which the outer compartment is filled with a gelatin matrix containing viable yeast cells. Perfluorocarbon emulsions can be added to the gelatin matrix to simulate sequestered perfluorocarbons.

Degradation of isooctane by Mycobacterium austroafricanum IFP 2173: growth and catabolic pathway.

Aims: Isooctane (2,2,4-trimethylpentane), a major component of gasoline formulations, is recalcitrant to biodegradation probably because of the quaternary carbon group it contains. Information on the biodegradability of this hydrocarbon is essential to evaluate its fate in the environment. For these reasons, the degradation kinetics and the catabolic pathway of isooctane were investigated in Mycobacterium austroafricanum IFP 2173, the only strain characterized to use it as sole carbon and energy source.

Microbial degradation and fate in the environment of methyl tert-butyl ether and related fuel oxygenates.

Oxygenates, mainly methyl tert-butyl ether (MTBE), are commonly added to gasoline to enhance octane index and improve combustion efficiency. Other oxygenates used as gasoline additives are ethers such as ethyl tert-butyl ether (ETBE), tert-amyl methyl ether (TAME), and alcohols such as tert-butyl alcohol (TBA). As a result of its wide use, MTBE has been detected, mainly in the USA, in groundwater and surface waters, and is a cause of concern because of its possible health effects and other undesirable consequences.

Evidence for interfacial uptake in hexadecane degradation by Rhodococcus equi: the importance of cell flocculation.

The kinetics of hexadecane degradation were studied in four strains of Rhodococcus equi that did not produce biosurfactants. The aim was to analyse the characteristics of alkane uptake and their relevance to a mechanism of interfacial uptake. The kinetic studies involved continuous determination of degradation by electrolytic respirometry in a diphasic system where the hydrophobic phase was hexadecane or a solution of hexadecane in a non-toxic, non-biodegradable solvent, either 2,2,4,4,6,8,8-heptamethylnonane or silicone oil.

Biodegradation of tert-butyl alcohol and related xenobiotics by a methylotrophic bacterial isolate.

A new aerobic bacterial strain, CIP 1-2052, isolated from an activated sludge sample, was able to use tert-butyl alcohol (TBA), a product of methyl tert-butyl ether (MTBE) and ethyl tert-butyl ether (ETBE) degradation, as its sole carbon and energy source. Cobalt ions stimulated TBA mineralization. The maximum growth and TBA degradation rates were 0.

Biodegradation of ethyl t-butyl ether (ETBE), methyl t-butyl ether (MTBE) and t-amyl methyl ether (TAME) by Gordonia terrae.

Gordonia terrae strain IFP 2001 was selected from activated sludge for its capacity to grow on ethyl t-butyl ether (ETBE) as sole carbon and energy source. ETBE was stoichiometrically degraded to t-butyl alcohol (TBA) and the activity was inducible. A constitutive strain, G.

Distribution in the environment of degradative capacities for gasoline attenuation.

A methodology allowing the detailed assessment of the capacities of microflorae to degrade gasoline in aerobic conditions has been developed. It consisted in the determination of the degradation of a gasoline model mixture in liquid cultures in optimal conditions. The gasoline model mixture contained 23 representative hydrocarbons of gasoline (GM23).

Efficiency of defined strains and of soil consortia in the biodegradation of polycyclic aromatic hydrocarbon (PAH) mixtures.

The microbiological characteristics of the bacterial degradation of mixtures of five polycyclic aromatic hydrocarbons (PAH), phenanthrene, fluorene, anthracene, fluoranthene and pyrene, were investigated. Three pure bacterial strains using one or several of these PAH as carbon sources were selected. The interactions between PAH during the degradation of PAH pairs by each of these strains were studied and their effects on the kinetics and the balance of degradation were characterised.

Biodegradability of volatile hydrocarbons of gasoline.

The biodegradability under aerobic conditions of volatile hydrocarbons (4-6 carbons) contained in gasoline and consisting of n-alkanes, iso-alkanes, cycloalkanes and alkenes, was investigated. Activated sludge was used as the reference microflora. The biodegradation test involved the degradation of the volatile fraction of gasoline in closed flasks under optimal conditions.

A Mycobacterium strain with extended capacities for degradation of gasoline hydrocarbons.

A bacterial strain (strain IFP 2173) was selected from a gasoline-polluted aquifer on the basis of its capacity to use 2,2, 4-trimethylpentane (isooctane) as a sole carbon and energy source. This isolate, the first isolate with this capacity to be characterized, was identified by 16S ribosomal DNA analysis, and 100% sequence identity with a reference strain of Mycobacterium austroafricanum was found. Mycobacterium sp.

Selection of microbial populations degrading recalcitrant hydrocarbons of gasoline by monitoring of culture-headspace composition.

A methodology was devised and was found useful for the selection of populations degrading recalcitrant hydrocarbons. The work was part of a programme aiming at developing knowledge of the intrinsic capacities of autochtonous microflorae of the environment for gasoline biodegradation. The methodology involved monitoring the progress of degradation in enrichment liquid cultures on the selected hydrocarbon by gas chromatographic analysis of CO2 production and O2 consumption.

Biodegradation of gasoline: kinetics, mass balance and fate of individual hydrocarbons.

The degradation of gasoline by a microflora from an urban waste water activated sludge was investigated in detail. Degradation kinetics were studied in liquid cultures at 30 degrees C by determination of overall O2 consumption and CO2 production and by chromatographic analysis of all 83 identifiable compounds. In a first fast phase (2 d) of biodegradation, 74% of gasoline, involving mostly aromatic hydrocarbons, was consumed.

Diversity of bacterial strains degrading hexadecane in relation to the mode of substrate uptake.

The relative distribution of the modes of hydrocarbon uptake, used by bacteria of the environment for the degradation of long-chain alkanes, has been evaluated. The first mode of uptake, direct interfacial accession, involves contact of cells with hydrocarbon droplets. In the second mode, biosurfactant-mediated transfer, cell contact takes place with hydrocarbons emulsified or solubilized by biosurfactants.

Intrinsic capacities of soil microflorae for gasoline degradation.

A methodology to determine the intrinsic capacities of a microflora to degrade gasoline was developed, in particular for assessing the potential of autochtonous populations of polluted and non polluted soils for natural attenuation and engineered bioremediation. A model mixture (GM23) constituted of the 23 most representative hydrocarbons of a commercial gasoline was used. The capacities of the microflorae (kinetics and extent of biodegradation) were assessed by chromatographic analysis of hydrocarbon consumption and of CO2 production.

Involvement of a rhamnolipid-producing strain of Pseudomonas aeruginosa in the degradation of polycyclic aromatic hydrocarbons by a bacterial community.

A rhamnolipid-producing strain of Pseudomonas aeruginosa GL1 was isolated from a bacterial community growing on a mixture of polycyclic aromatic hydrocarbons (PAH) as sole carbon source. Strain GL1 did not grow on PAH but grew on known degradation metabolites of phenanthrene (O-phthalic acid) and of naphthalene (salicylic acid). In co-culture with a phenanthrene-degrading strain, Ps.

An interfacial uptake mechanism for the degradation of pyrene by a strain.

The mechanism of uptake of polycyclic aromatic hydrocarbons (PAHs) was studied using a kinetic approach by electrolytic respirometry. In the case of the degradation of pyrene dissolved in a non-water-soluble non-degradable solvent (2,2,4,4,6,8,8-heptamethylnonane), by a Rhodococcus sp., two successive phases of exponential growth, during which over 80% of substrate degradation took place, were clearly characterized.

Kinetic studies of biodegradation of insoluble compounds by continuous determination of oxygen consumption.

Continuous determination of oxygen consumption by electrolytic respirometry has been experimented as a means to study the biodegradation kinetics of scarcely soluble environmental pollutants. The substrates used were the polycyclic aromatic hydrocarbons (PAH), naphthalene, phenanthrene, anthracene, fluoranthene and pyrene. The definition of an appropriate mode of PAH supply, either as crystals or more generally as a solution in a water non-miscible solvent, was found essential for yielding reproducible biodegradation kinetics.

The microbiological fate of polycyclic aromatic hydrocarbons: carbon and oxygen balances for bacterial degradation of model compounds.

A series of pure bacterial strains belonging mainly to the Rhodococcus and Pseudomonas genera were grown on one of the following polycyclic aromatic hydrocarbons (PAH) supplied as sole carbon and energy source; naphthalene, fluorene, phenanthrene, anthracene, fluoranthene and pyrene. In each case, a quantitative evaluation of the carbon repartition of the PAH degraded into CO2, biomass and water-soluble metabolites was carried out. In addition, the kinetics of oxygen consumption and of water-soluble metabolite accumulation during PAH biodegradation was followed with respirometric equipment.

Substrate availability in phenanthrene biodegradation: transfer mechanism and influence on metabolism.

The mechanism of phenanthrene transfer to the bacteria during biodegradation by a Pseudomonas strain was investigated using a sensitive respirometric technique (Sapromat equipment) allowing the quasi-continuous acquisition of data on oxygen consumption. Several systems of phenanthrene supply, crystalline solid and solutions in non-water-miscible solvents (silicone oil and 2,2,4,4,6,8,8-heptamethylnonane) were studied. In all cases, analysis of the kinetics of oxygen consumption demonstrated an initial phase of exponential growth with the same specific growth rate.