Publications by authors named "Tyler T Cooper"

Background: The five-year prognosis for patients with late-stage high-grade serous carcinoma (HGSC) remains dismal, underscoring the critical need for identifying early-stage biomarkers. This study explores the potential of extracellular vesicles (EVs) circulating in blood, which are believed to harbor proteomic cargo reflective of the HGSC microenvironment, as a source for biomarker discovery.

Results: We conducted a comprehensive proteomic profiling of EVs isolated from blood plasma, ascites, and cell lines of patients, employing both data-dependent (DDA) and data-independent acquisition (DIA) methods to construct a spectral library tailored for targeted proteomics.

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Article Synopsis
  • Extracellular vesicles (EVs) are important carriers of biomolecules, facilitating communication between cells and potentially serving as disease biomarkers, but their analysis can be complicated by methodology.
  • The study outlines a comprehensive method for isolating and analyzing EVs from blood plasma using advanced techniques like surface-enhanced Raman spectroscopy (SERS) and mass spectrometry (MS), focusing on samples from healthy donors and women with early-stage ovarian cancer.
  • By applying machine learning to SERS data, the researchers developed a reliable workflow that could help distinguish between healthy and cancerous EVs, presenting a potential diagnostic tool for early-stage high-grade serous carcinoma.
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The mechanistic underpinnings of breast cancer recurrence following periods of dormancy are largely undetermined. A new study in PLOS Biology reveals that docetaxel-induced injury of tumour stromal cells stimulates the release of cytokines that support dormancy escape of breast cancer cells.

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  • This study explored how human adipose-derived stromal cells (hASCs) grow on microcarriers made from decellularized adipose tissue (DAT) and decellularized cartilage tissue (DCT) in bioreactor cultures.
  • Results showed that hASCs grew denser on DCT microcarriers compared to DAT, and dynamic culture influenced gene and protein expression related to cell adhesion and ECM remodeling.
  • Although hASCs showed enhanced lipid accumulation with adipogenic differentiation on both microcarriers, only low levels of chondrogenic differentiation were observed, suggesting that future research should consider other cell types for chondrogenic studies.
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Wnt and Hh are known signalling pathways involved in neural differentiation and recent work has shown the cell cycle regulator, Never in Mitosis Kinase 2 (Nek2) is able to regulate both pathways. Despite its known function in pathway regulation, few studies have explored Nek2 within embryonic development. The P19 embryonal carcinoma cell model was used to investigate Nek2 and neural differentiation through CRISPR knockout and overexpression studies.

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  • Metabolism is essential for cell survival and function, playing a significant role in embryonic development, particularly in forming pluripotent epiblast stem cells and primitive endoderm cells from the inner cell mass.
  • Recent findings reveal that mouse extraembryonic endoderm (XEN) cells show high sensitivity to glycolytic inhibition and maintain elevated lactate levels due to increased LDHA activity and altered pyruvate processing.
  • Lactate supplementation enhances the differentiation of XEN cells in vitro, suggesting its potential to improve cell reprogramming efficiency for applications in regenerative medicine.
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  • * The study explores using extracellular vesicles (EVs) derived from cancer cells as biomarkers for non-invasive early diagnosis.
  • * Researchers utilized gold nanohole arrays and surface-enhanced Raman spectroscopy (SERS) to analyze EVs from both established and primary ovarian cancer cell lines, achieving around 99% accuracy in distinguishing between them through machine learning.
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  • Extracellular vesicles (EVs) facilitate communication between cells by transferring proteins and RNA, and those from mesenchymal stromal cells (MSCs) show potential as cell-free regenerative agents.* -
  • A major challenge in utilizing MSC EVs therapeutically is the need for standardized methods of detection and characterization, especially due to their small size and molecular diversity.* -
  • The researchers created gold nanohole arrays to trap single EVs and enhance their detection using surface-enhanced Raman spectroscopy (SERS), successfully distinguishing between MSC EVs from pancreatic and bone marrow sources using machine learning with high accuracy.*
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  • Cellular therapies aimed at stimulating blood vessel growth in patients with critical limb ischemia (CLI) are being actively researched, focusing on the effectiveness of the transplanted cells based on their survival and signaling abilities.
  • This study explored the use of human decellularized adipose tissue (DAT) bioscaffolds to guide the differentiation of hematopoietic progenitor cells (HPC) into pro-angiogenic cell types, enhancing their therapeutic potential.
  • Results showed that HPC cultured on DAT scaffolds not only improved their differentiation but also led to better retention in ischemic tissue and enhanced limb recovery in mouse models, indicating that DAT scaffolds could effectively boost the success of cell therapies for CLI.
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The secretome of mesenchymal stromal cells (MSCs) is enriched for biotherapeutic effectors contained within and independent of extracellular vesicles (EVs) that may support tissue regeneration as an injectable agent. We have demonstrated that the intrapancreatic injection of concentrated conditioned media (CM) produced by bone marrow MSC supports islet regeneration and restored glycemic control in hyperglycemic mice, ultimately providing a platform to elucidate components of the MSC secretome. Herein, we extend these findings using human pancreas-derived MSC (Panc-MSC) as "biofactories" to enrich for tissue regenerative stimuli housed within distinct compartments of the secretome.

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Fluorescent-activated cell sorting (FACS) remains a powerful tool to enrich blood-derived progenitor cells for the establishment of highly proliferative endothelial colony-forming cells (ECFC). Further investigation remains necessary to determine whether the retention of progenitor cell phenotypes after expansion can identify ECFC with enhanced proangiogenic and regenerative functions. This study employed FACS purification to segregate umbilical cord blood-derived ECFC using conserved provascular progenitor cell markers CD34 or aldehyde dehydrogenase (ALDH) activity.

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Multipotent/mesenchymal stromal cells (MSCs) exist within a variety of postnatal tissues; however, global proteomic analyses comparing tissue-specific MSC are limited. Using human bone marrow (BM)-derived MSCs as a gold standard, we used label-free mass spectrometry and functional assays to characterize the proteome, secretome, and corresponding function of human pancreas-derived MSCs (Panc-MSCs) with a classical phenotype (CD90+/CD73+/CD105+/CD45-/CD31-). Both MSC subtypes expressed mesenchymal markers vimentin, α-SMA, and STRO-1; however, expression of nestin was increased in Panc-MSCs.

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Recently in Nature, Wimmer et al. (2019) reported on the development of a human organoid model of vascular development recapitulating vascular pathology during type 2 diabetes. Integration of these organoids into the vasculature of immunodeficient mice may provide cardiometabolic researchers with a "personalized" platform for novel therapeutic discovery.

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Background:  Platelet microparticles (PMPs) and their abundance in the blood are a prognostic biomarker in thrombotic disorders and cancer. Nanoscale flow cytometry (nFC) is ideal for high-throughput analysis of PMPs but these clinical assays have not been developed previously.

Objective:  This article demonstrates that nFC is a suitable technology to enumerate PMPs present in plasma samples in a clinical setting.

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Kidney stone disease involves the aggregation of stone-forming salts consequent to solute supersaturation in urine. The development of novel therapeutic agents for this predominantly metabolic and biochemical disorder have been hampered by the lack of a practical pre-clinical model amenable to drug screening. Here, , an emerging model for kidney stone disease research, was adapted as a high-throughput functional drug screening platform independent of the multifactorial nature of mammalian nephrolithiasis.

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Islet regeneration is stimulated after transplantation of human umbilical cord blood (UCB) hematopoietic progenitor cells with high aldehyde dehydrogenase (ALDH)-activity into NOD/SCID mice with streptozotocin (STZ)-induced β cell ablation. ALDH progenitor cells represent a rare subset within UCB that will require expansion without the loss of islet regenerative functions for use in cell therapies. ALDH cells efficiently expand (>70-fold) under serum-free conditions; however, high ALDH-activity is rapidly diminished during culture coinciding with emergence of a committed megakaryocyte phenotype CD41+/CD42+/CD38+.

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Blood-derived progenitor cell transplantation holds potential for the treatment of severe vascular diseases. Human umbilical cord blood (UCB)-derived hematopoietic progenitor cells purified using high aldehyde dehydrogenase (ALDH ) activity demonstrate pro-angiogenic functions following intramuscular (i.m.

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A promising strategy for treating peripheral ischemia involves the delivery of stem cells to promote angiogenesis through paracrine signaling. Treatment success depends on cell localization, retention, and survival within the mechanically dynamic intramuscular (IM) environment. Herein we describe an injectable, in situ-gelling hydrogel for the IM delivery of adipose-derived stem/stromal cells (ASCs), specifically designed to withstand the dynamic loading conditions of the lower limb and facilitate cytokine release from encapsulated cells.

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Uncompromised by chronic disease-related comorbidities, human umbilical cord blood (UCB) progenitor cells with high aldehyde dehydrogenase activity (ALDH cells) stimulate blood vessel regeneration after intra-muscular transplantation. However, implementation of cellular therapies using UCB ALDH cells for critical limb ischemia, the most severe form of severe peripheral artery disease, is limited by the rarity (<0.5%) of these cells.

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During culture expansion, multipotent mesenchymal stromal cells (MSCs) differentially express aldehyde dehydrogenase (ALDH), an intracellular detoxification enzyme that protects long-lived cells against oxidative stress. Thus, MSC selection based on ALDH-activity may be used to reduce heterogeneity and distinguish MSC subsets with improved regenerative potency. After expansion of human bone marrow-derived MSCs, cell progeny was purified based on low versus high ALDH-activity (ALDH ) by fluorescence-activated cell sorting, and each subset was compared for multipotent stromal and provascular regenerative functions.

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Human umbilical cord blood (UCB) hematopoietic progenitor cells (HPC) purified for high aldehyde dehydrogenase activity (ALDH(hi) ) stimulate islet regeneration after transplantation into mice with streptozotocin-induced β cell deletion. However, ALDH(hi) cells represent a rare progenitor subset and widespread use of UCB ALDH(hi) cells to stimulate islet regeneration will require progenitor cell expansion without loss of islet regenerative functions. Here we demonstrate that prospectively purified UCB ALDH(hi) cells expand efficiently under serum-free, xeno-free conditions with minimal growth factor supplementation.

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We report a rare case of anemia and thrombocytopenia as a result of uterine fibroid and adenomyosis, complicated by immune thrombocytopenic purpura (ITP). Symptoms were presented as menorrhagia and metrorrhagia in a 34-year-old African American woman, who was later treated with blood and platelet transfusion and iron therapy with steroids. Uterine fibroids are commonly found to cause hematologic disturbances such as anemia and reactive thrombocytosis and, less commonly, thrombocytopenia.

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