Publications by authors named "Tuan A Duong"

Sex determination pathways regulate male and female-specific development and differentiation and offer potential targets for genetic pest management methods. Insect sex determination pathways are comprised of primary signals, relay genes and terminal genes. Primary signals of coleopteran, dipteran, hymenopteran and lepidopteran species are highly diverse and regulate the sex-specific splicing of relay genes based on the primary signal dosage, amino acid composition or the interaction with paternally inherited genes.

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causes a serious and widespread disease known as Calonectria leaf blight in plantations of southern China. Little is known regarding the population biology or reproductive biology of this pathogen in the affected areas. The aims of this study were to investigate the genetic diversity, population structure, and reproductive mode of .

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Calonectria leaf blight (CLB) is one of the best-known diseases of Eucalyptus spp., particularly in Asia and South America. Recently, typical symptoms of leaf and shoot blight caused by Calonectria spp.

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Article Synopsis
  • The study examines the effects of timing for esophagogastroduodenoscopy (EGD) in adults with food bolus impaction, comparing results to European Society of Gastrointestinal Endoscopy (ESGE) guidelines.
  • A total of 248 patients were reviewed, revealing complication rates of 31.6% for minor issues, 6.9% for tears, and 0.8% for perforations, with no significant links between delays in EGD and adverse outcomes.
  • The findings suggest that age and the severity of complications are better predictors of hospital stay than the timing of EGD following ingestion or presentation.
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The pace at which Next Generation Sequence data is being produced continues to accelerate as technology improves. As a result, such data are increasingly becoming accessible to biologists outside of the field of bioinformatics. In contrast, access to training in the methods of genome assembly and annotation are not growing at a similar rate.

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The draft genome of was sequenced with Oxford Nanopore and Illumina 250 bp paired-end sequencing technologies. The assembled genome was 42.9 Mb distributed over 24 contigs, with N50 of 4.

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A serious factor hampering global maize production is gray leaf spot disease. Cercospora zeina is one of the causative pathogens, but population genomics analysis of C. zeina is lacking.

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Background: De novo phased (haplo)genome assembly using long-read DNA sequencing data has improved the detection and characterization of structural variants (SVs) in plant and animal genomes. Able to span across haplotypes, long reads allow phased, haplogenome assembly in highly outbred organisms such as forest trees. Eucalyptus tree species and interspecific hybrids are the most widely planted hardwood trees with F1 hybrids of Eucalyptus grandis and E.

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Background: Plant-parasitic nematodes (PPNs) that cause most damage include root-knot nematodes (RKNs) which are a major impediment to crop production. Root-knot nematodes, like other parasites, secrete proteins which are required for parasite proliferation and survival within the host during the infection process.

Results: Here, we used various computational tools to predict and identify classically and non-classically secreted proteins encoded in the Meloidogyne javanica genome.

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The king protea (Protea cynaroides), an early-diverging eudicot, is the most iconic species from the Megadiverse Cape Floristic Region, and the national flower of South Africa. Perhaps best known for its iconic flower head, Protea is a key genus for the South African horticulture industry and cut-flower market. Ecologically, the genus and the family Proteaceae are important models for radiation and adaptation, particularly to soils with limited phosphorus bio-availability.

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Article Synopsis
  • To enhance our understanding of genetic mechanisms in plants, particularly in Eucalyptus—a major forest genus—there's a need for more comprehensive analysis of gene variants.
  • Current breeding methods depend on biallelic SNP markers, which don't adequately represent the genetic diversity found in these species, highlighting the necessity for multi-allelic markers.
  • A new haplotype mining panel was developed, identifying a large number of SNPs and demonstrating its effectiveness in capturing genetic diversity across multiple Eucalyptus species, paving the way for more advanced breeding techniques and genome studies.
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Cyanobacteria are phototrophic organisms widely found in most types of natural habitats in the tropical regions of the world. In this study, we isolated and identified cyanobacterial strains from paddy soil in Hanoi (Vietnam) and investigated their cytotoxic activities. Five isolated cyanobacterial strains showed distinctive profiles of gene sequences (rRNA 16S and ), phylogenetic placements, and morphological characteristics.

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  • Eucalyptus plantations in southern China have significantly increased to meet the demand for wood and pulp, but they face threats from leaf blight caused by Calonectria fungi.
  • Soil samples were collected from various plantation types and natural forests in Fujian Province, resulting in the recovery of 353 Calonectria isolates, identifying six known species and one new species.
  • The study found that Calonectria spp. were most prevalent in Eucalyptus stands, indicating a focus on Angiosperm plants, while fewer species were associated with Gymnosperms like Cunninghamia lanceolata and Pinus massoniana.
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Calonectria leaf blight caused by spp. is among the most serious diseases affecting the health and sustainability of plantations in southern China. Recent outbreaks of this disease in GuangDong Province prompted a need to identify the species involved.

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  • The study focused on analyzing the genomes of five isolates of a global pathogen affecting pine trees, revealing significant genome plasticity and structural variations.
  • A total of 461,683 micro variants and 1,828 macro structural variants were identified, with a higher density of variants in sub-telomeric regions linked to genes related to important cellular functions.
  • The findings highlight both conserved and divergent genomic elements among isolates, which can aid in developing better strategies for managing the disease caused by this pathogen.
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Symbiosis between beetles and fungi arose multiple times during the evolution of both organisms. Some of the most biologically diverse and economically important are mutualisms in which the beetles cultivate and feed on fungi. Among these are bark beetles and , a fungal genus that produces -like asexual morph and hosts the causal agent of laurel wilt, (formerly ).

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The majority of the Australian public are willing to have a Coronavirus disease 2019 (COVID-19) vaccination. It is unclear whether people with inflammatory bowel disease (IBD) have the same attitude towards COVID-19 vaccination. A survey was performed to assess the attitude of patients with IBD towards COVID-19 vaccination in South Australia.

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Resistance to the antibiotic Cycloheximide has been reported for a number of fungal taxa. In particular, some yeasts are known to be highly resistant to this antibiotic. Early research showed that this resulted from a transition mutation in one of the 60S ribosomal protein genes.

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is the causal agent of root rot, canker, and dieback of thousands of plant species around the globe. This oomycete not only causes severe economic losses to forestry and agricultural industries, but also threatens the health of various plants in natural ecosystems. In this study, 380 isolates of from four avocado production areas and two regions of natural vegetation in South Africa were investigated using 15 microsatellite markers.

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Vertebrate-parasitic nematodes cause debilitating, chronic infections in millions of people worldwide. The burden of these so-called 'neglected tropical diseases' is often carried by poorer socioeconomic communities in part because research on parasitic nematodes and their vertebrate hosts is challenging and costly. However, complex biological and pathological processes can be modeled in simpler organisms.

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