Publications by authors named "Tripet B"

Article Synopsis
  • - Neurodegenerative retinal diseases like glaucoma and diabetic retinopathy involve the gradual death of retinal ganglion cells (RGCs), driven by mitochondrial dysfunction, oxidative stress, and decreased energy production.
  • - Familial dysautonomia (FD) also leads to RGC degeneration, revealing disruptions in mitochondrial structures and energy metabolism that may impact overall visual health, with specific changes in the serum and stool metabolomes indicating systemic deficiencies.
  • - The study investigated alterations in retinal metabolites and focused on dopaminergic amacrine cells, which influence RGC activity, using advanced techniques like NMR spectroscopy and mass spectrometry to link these changes to the progressive loss of RGCs in an FD mouse model.
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The complexity of macrophage (MΦ) plasticity and polarization states, which include classically activated pro-inflammatory (M1) and alternatively activated anti-inflammatory (M2) MΦ phenotypes, is becoming increasingly appreciated. Within the M2 MΦ polarization state, M2a, M2b, M2c, and M2d MΦ subcategories have been defined based on their expression of specific cell surface receptors, secreted cytokines, and specialized immune effector functions. The importance of immunometabolic networks in mediating the function and regulation of MΦ immune responses is also being increasingly recognized, although the exact mechanisms and extent of metabolic modulation of MΦ subtype phenotypes and functions remain incompletely understood.

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Introduction: Bladder cancer is a common malignancy affecting the urinary tract and effective biomarkers and for which monitoring therapeutic interventions have yet to be identified.

Objectives: Major aim of this work was to perform metabolomic profiling of human bladder cancer and adjacent normal tissue and to evaluate cancer biomarkers.

Methods: This study utilized nuclear magnetic resonance (NMR) and high-resolution nanoparticle-based laser desorption/ionization mass spectrometry (LDI-MS) methods to investigate polar metabolite profiles in tissue samples from 99 bladder cancer patients.

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Bladder cancer (BC) is frequent cancer affecting the urinary tract and is one of the most prevalent malignancies worldwide. No biomarkers that can be used for effective monitoring of therapeutic interventions for this cancer have been identified to date. This study investigated polar metabolite profiles in urine samples from 100 BC patients and 100 normal controls (NCs) using nuclear magnetic resonance (NMR) and two methods of high-resolution nanoparticle-based laser desorption/ionization mass spectrometry (LDI-MS).

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Article Synopsis
  • Central metabolism influences the development and severity of neurological diseases like Alzheimer's and Parkinson's, while Familial Dysautonomia (FD) is caused by a single gene mutation.
  • Research using H NMR spectroscopy has revealed significant metabolic changes in FD patients, impacting energy production, mitochondrial function, and gut microbial metabolism.
  • The findings suggest a strong link between metabolism, neurodegeneration, and gut health in FD, highlighting potential for metabolic interventions to slow disease progression.
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Understanding the impact of sessile communities on underlying materials is of paramount importance in stone conservation. Up until now, the critical role of subaerial biofilms (SABs) whether they are protective or deteriorative remains unclear, especially under desiccation. The interest in desiccated SABs is raised by the prediction of an increase in drought events in the next decades that will affect the Mediterranean regions' rich stone heritage as never before.

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Familial dysautonomia (FD) is a rare genetic neurologic disorder caused by impaired neuronal development and progressive degeneration of both the peripheral and central nervous systems. FD is monogenic, with >99.4% of patients sharing an identical point mutation in the elongator acetyltransferase complex subunit 1 (ELP1) gene, providing a relatively simple genetic background in which to identify modifiable factors that influence pathology.

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Bladder cancer (BC) is one of the most frequently diagnosed types of urinary cancer. Despite advances in treatment methods, no specific biomarkers are currently in use. Targeted and untargeted profiling of metabolites and elements of human blood serum from 100 BC patients and the same number of normal controls (NCs), with external validation, was attempted using three analytical methods, i.

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Hypoglycemia may be induced by a variety of physiologic and pathologic stimuli and can result in life-threatening consequences if untreated. However, hypoglycemia may also play a role in the purported health benefits of intermittent fasting and caloric restriction. Previously, we demonstrated that systemic administration of ricin toxin induced fatal hypoglycemia in mice.

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Metallophilic interactions between closed-shell metal centers are exemplified by d ions, with Au(I) aurophilic interactions as the archetype. Such an interaction extends to d species, and examples involving Au(III) are prevalent. Conversely, Ag(III) argentophilic interactions are uncommon.

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Article Synopsis
  • The study focuses on extremophilic microorganisms from Yellowstone hot springs that can degrade lignocellulose, offering potential for biofuel production from agricultural waste.
  • Researchers identified specific thermophiles capable of breaking down lignin and cellulose at high temperatures (60-75°C) and alkaline pH (8-9).
  • The findings highlight the potential of these organisms, particularly Geobacillus thermoleovorans, for biotechnological applications, such as biorefineries that convert renewable biomass into energy, replacing petroleum-based products.
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Environmental metabolomics has the potential to facilitate the establishment of a new suite of tools for assessing the physiological status of important wildlife species. A first step in developing such tools is to evaluate the impacts of various capture techniques on metabolic profiles as capture is necessary to obtain the biological samples required for assays. This study employed H nuclear magnetic resonance (NMR)-based metabolite profiling of 562 blood serum samples from wild bighorn sheep to identify characteristic molecular serum makers of three capture techniques (dart, dropnet, and helicopter-based captures) to inform future sampling protocols for metabolomics studies, and to provide insights into the physiological impacts of capture.

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Introduction: Kidney cancer is one of the most frequently diagnosed and the most lethal urinary cancer. Despite advances in treatment, no specific biomarker is currently in use to guide therapeutic interventions.

Objectives: Major aim of this work was to perform metabolomic and elemental profiling of human kidney cancer and normal tissue and to evaluate cancer biomarkers.

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Kidney cancer is one of the most frequently diagnosed cancers of the urinary tract in the world. Despite significant advances in kidney cancer treatment, no urine specific biomarker is currently used to guide therapeutic interventions. In an effort to address this knowledge gap, metabolic profiling of urine samples from 50 patients with kidney cancer and 50 healthy volunteers was undertaken using high-resolution proton nuclear magnetic resonance spectroscopy (H NMR) and silver-109 nanoparticle enhanced steel target laser desorption/ionization mass spectrometry (AgNPET LDI MS).

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Macrophages (MΦs) are prevalent innate immune cells, present throughout human bodily tissues where they orchestrate innate and adaptive immune responses to maintain cellular homeostasis. MΦs have the capacity to display a wide array of functional phenotypes due to different microenvironmental cues, particularly soluble bacterial secretory products. Recent evidence has emerged demonstrating that metabolism supports MΦ function and plasticity, in addition to energy and biomolecular precursor production.

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Arsenite (As) oxidation is a microbially-catalyzed transformation that directly impacts arsenic toxicity, bioaccumulation, and bioavailability in environmental systems. The genes for As oxidation () encode a periplasmic As sensor AioX, transmembrane histidine kinase AioS, and cognate regulatory partner AioR, which control expression of the As oxidase AioBA. The genes are under ultimate control of the phosphate stress response via histidine kinase PhoR.

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Kidney cancer is one of the most frequently diagnosed and the most lethal urinary cancer. Despite all the efforts made, no serum-specific biomarker is currently used in the clinical management of patients with this tumor. In this study, comprehensive high-resolution proton nuclear magnetic resonance spectroscopy (H NMR) and silver-109 nanoparticle-enhanced steel target laser desorption/ionization mass spectrometry (AgNPET LDI MS) approaches were conducted, in conjunction with multivariate data analysis, to discriminate the global serum metabolic profiles of kidney cancer (n = 50) and healthy volunteers (n = 49).

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BioOrthogonal Non-Canonical Amino acid Tagging (BONCAT) is a powerful tool for tracking protein synthesis on the level of single cells within communities and whole organisms. A basic premise of BONCAT is that the non-canonical amino acids (NCAA) used to track translational activity do not significantly alter cellular physiology. If the NCAA would induce changes in the metabolic state of cells, interpretation of BONCAT studies could be challenging.

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This study aimed to characterize the impact of dietary copper on the biochemical and hepatic metabolite changes associated with fructose toxicity in a Wistar rat model of fructose-induced liver disease. Twenty-four male and 24 female, 6-week-old, Wister rats were separated into four experimental dietary treatment groups (6 males and 6 females per group), as follows: (1) a control diet: containing no fructose with adequate copper (i.e.

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Macrophages (MΦs) are phagocytic immune cells that are found in nearly all human tissues, where they modulate innate and adaptive immune responses, thereby maintaining cellular homeostasis. MΦs display a spectrum of functional phenotypes as a result of microenvironmental and stress-induced stimuli. Evidence has emerged demonstrating that metabolism is not only crucial for the generation of energy and biomolecular precursors, but also contributes to the function and plasticity of MΦs.

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The taphylococcal espiratory egulator (SrrAB) modulates energy metabolism in Studies have suggested that regulated protein catabolism facilitates energy homeostasis. Regulated proteolysis in is achieved through protein complexes composed of a peptidase (ClpQ or ClpP) in association with an AAA family ATPase (typically, ClpC or ClpX). In the present report, we tested the hypothesis that SrrAB regulates a Clp complex to facilitate energy homeostasis in Strains deficient in one or more Clp complexes were attenuated for growth in the presence of puromycin, which causes enrichment of misfolded proteins.

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Bald's eyesalve is an Anglo-Saxon medicinal remedy that has been used through ancient times to treat eye sty infections and may represent a source of ancientbiotics. This study assessed the efficacy of Bald's eyesalve against several strains of Staphylococcus aureus and Pseudomonas aeruginosa, including a multi-drug resistant phenotype, and identified the principal compound conveying antibacterial activity. Bald's eyesalve formulations were produced by combining garlic, onion or leek, wine, bovine bile, and brass, with specific ingredient omissions in several formulations, followed by incubation at 4 °C for 9 days.

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This study investigated resistance against trishexylaminomelamine trisphenylguanide (THAM-3ΦG), a novel antibacterial compound with selective microbicidal activity against Staphylococcus aureus. Resistance development was examined by culturing methicillin resistant S. aureus (MRSA) with sub-lethal doses of THAM-3ΦG.

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Article Synopsis
  • Coenzyme M (CoM) was previously thought to only exist in methanogenic archaea, but recent findings showed its role in bacterial propene metabolism, leading to the identification of potential CoM biosynthetic enzymes in the bacterium Py2.
  • The study highlighted four putative enzymes linked to CoM production, with only one showing similarity to already known archeal counterparts, suggesting a distinct biosynthetic process in bacteria.
  • Key enzymatic activities were confirmed, illustrating the initial steps of CoM biosynthesis in bacteria and paving the way for further understanding of this metabolic pathway.
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