Publications by authors named "Trbojevic-Akmacic I"

Introduction: Glycomics, focusing on the role of glycans in biological processes, particularly their influence on the folding, stability and receptor interactions of glycoconjugates like antibodies, is vital for our understanding of biology. Changes in immunoglobulin G (IgG) N-glycosylation have been associated with various physiological and pathophysiological conditions. Nevertheless, time-consuming manual sample preparation is one of the limitations in the glycomics diagnostic implementation.

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Background: Posttranslational glycosylation of IgG can modulate its inflammatory capacity through structural variations. We examined the association of baseline IgG N-glycans and an IgG glycan score with incident cardiovascular disease (CVD).

Methods: IgG N-glycans were measured in 2 nested CVD case-control studies: JUPITER (Justification for the Use of Statins in Prevention: an Intervention Trial Evaluating Rosuvastatin; NCT00239681; primary prevention; discovery; Npairs=162); and TNT trial (Treating to New Targets; NCT00327691; secondary prevention; validation; Npairs=397).

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Glycans are an essential structural component of immunoglobulin G (IgG) that modulate its structure and function. However, regulatory mechanisms behind this complex posttranslational modification are not well known. Previous genome-wide association studies (GWAS) identified 29 genomic regions involved in regulation of IgG glycosylation, but only a few were functionally validated.

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  • * The study employed a high-throughput method to analyze changes in serum IgG N-glycome composition in 198 CD patients during 14 weeks of anti-TNF treatment, finding significant shifts indicating reduced inflammation.
  • * While IgG N-glycan patterns may provide insights into treatment outcomes, they cannot reliably predict which patients will be non-responsive to anti-TNF therapy before treatment begins.
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Human plasma transferrin (Tf) N-glycosylation has been mostly studied as a marker for congenital disorders of glycosylation, alcohol abuse, and hepatocellular carcinoma. However, inter-individual variability of Tf N-glycosylation is not known, mainly due to technical limitations of Tf isolation in large-scale studies. Here, we present a highly specific robust high-throughput approach for Tf purification from human blood plasma and detailed characterization of Tf N-glycosylation on the level of released glycans by ultra-high-performance liquid chromatography based on hydrophilic interactions and fluorescence detection (HILIC-UHPLC-FLD), exoglycosidase sequencing, and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS).

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Background: Immune checkpoint inhibitors (ICIs) have revolutionized the treatment of melanoma and other cancers. However, no reliable biomarker of survival or response has entered the clinic to identify those patients with melanoma who are most likely to benefit from ICIs. Glycosylation affects proteins and lipids' structure and functions.

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Haptoglobin (Hp) is a positive acute phase protein, synthesized in the liver, with four N-glycosylation sites carrying mainly complex type N-glycans. Its glycosylation is altered in different types of diseases but still has not been extensively studied mainly due to analytical challenges, especially the lack of a fast, efficient, and robust high-throughput Hp isolation procedure. Here, we describe the development of a high-throughput method for Hp enrichment from human plasma, based on monolithic chromatographic support in immunoaffinity mode and downstream Hp N-glycome analysis by hydrophilic interaction ultrahigh-performance liquid chromatography with fluorescent detection (HILIC-UHPLC-FLR).

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Objective: N-glycosylation is a functional posttranslational modification of immunoglobulins (Igs). We hypothesized that specific IgG N-glycans are associated with incident type 2 diabetes and cardiovascular disease (CVD).

Research Design And Methods: We performed case-cohort studies within the population-based European Prospective Investigation into Cancer and Nutrition (EPIC)-Potsdam cohort (2,127 in the type 2 diabetes subcohort [741 incident cases]; 2,175 in the CVD subcohort [417 myocardial infarction and stroke cases]).

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  • Immunoglobulin G (IgG) plays a crucial role in immune regulation and fighting infections, with its effectiveness influenced by specific carbohydrate structures (glycans) attached to its Fc domain.
  • A study analyzed IgG glycosylation in 64 influenza patients, 77 COVID-19 patients, and 56 healthy controls, revealing significant decreases in certain glycan traits like galactosylation and sialylation in deceased COVID-19 patients, while fucosylation increased.
  • The glycosylation patterns in influenza patients changed over time, suggesting a dynamic immune response, with survivors showing similar traits to those with influenza, indicating that effective immune responses could lead to less severe outcomes.
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Male infertility, a condition that has during the last decade raised significant concern, is a diagnostically demanding and socially sensitive topic. The number of unsolved issues on infertility etiology, especially potential environmental causes, in couples demonstrates the need for further investigations into infertility biomarkers. Semen parameters are often insufficient for reliable profiling of male infertility.

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  • * The field faces challenges that require advanced analytical technologies for efficient analysis of numerous glycomes, leading to the term high-throughput glycomics.
  • * This review covers the history, recent advancements, and challenges in glycomic profiling, spotlighting technologies used for analyzing glycosylation in both healthy and diseased states, along with future directions in the field.
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Background: The severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) causes a respiratory illness named coronavirus disease 2019 (COVID-19), which is one of the main global health problems since 2019. Glycans attached to the Fc portion of immunoglobulin G (IgG) are important modulators of IgG effector functions. Fc region binds to different receptors on the surface of various immune cells, dictating the type of immune response.

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Glycans expand the structural complexity of proteins by several orders of magnitude, resulting in a tremendous analytical challenge when including them in biomedical research. Recent glycobiological research is painting a picture in which glycans represent a crucial structural and functional component of the majority of proteins, with alternative glycosylation of proteins and lipids being an important regulatory mechanism in many biological and pathological processes. Since interindividual differences in glycosylation are extensive, large studies are needed to map the structures and to understand the role of glycosylation in human (patho)physiology.

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  • Post-translational modifications (PTMs) play a crucial role in protein function and cell signaling, yet their genetic regulation is still not fully understood.
  • This study compares the genetic regulation of glycosylation in two proteins, transferrin and immunoglobulin G (IgG), identifying new genetic loci associated with transferrin glycosylation.
  • The findings reveal that while some genes affecting glycosylation are specific to each protein, there are also shared genetic influences, indicating a complex interplay in how these modifications are regulated.
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Gonadal hormones affect immunoglobulin G (IgG) glycosylation, and the more proinflammatory IgG glycome composition might be one of the molecular mechanisms behind the increased proinflammatory phenotype in perimenopause. Using ultra-high-performance liquid chromatography, we analyzed IgG glycome composition in 5,080 samples from 1940 pre-, peri-, and postmenopausal women. Statistically significant decrease in galactosylation and sialylation was observed in postmenopausal women.

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  • Ig glycosylation significantly impacts the structure and function of immunoglobulins (Igs) and is linked to various diseases, offering potential as diagnostic and prognostic biomarkers.
  • The production of therapeutic biomolecules based on Igs requires strict quality control to ensure their safety and effectiveness.
  • Analytical techniques such as liquid chromatography (LC) and lectin-based methods are essential for analyzing Ig glycosylation and include workflows for both low- and high-throughput assessments of glycan structures on immunoglobulin G (IgG).
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  • Male infertility is a growing health issue linked to various factors including congenital conditions, diseases, and environmental exposures, requiring a complex analysis of molecular mechanisms.
  • The study involved 166 participants divided into normozoospermic and pathological groups, using techniques like Halosperm assay and liquid chromatography to assess sperm and seminal plasma characteristics.
  • Results indicated that higher sperm DNA fragmentation correlates with lower motility and viability, and specific patterns of seminal plasma N-glycans can differentiate between normal and pathological semen, suggesting their relevance in understanding fertility.
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  • - SARS-CoV-2 infection leads to diverse clinical symptoms, with factors influencing severity known but biological mechanisms still unclear.
  • - The virus uses glycosylated surface proteins for cell interaction, primarily engaging the ACE2 receptor for entry.
  • - Recent research highlights other receptors, like C-type lectins, that also facilitate the virus's entry, which could impact COVID-19's clinical outcomes.
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Coronavirus disease 2019 (COVID-19), caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is currently one of the major health problems worldwide. SARS-CoV-2 survival and virulence are shown to be impacted by glycans, covalently attached to proteins in a process of glycosylation, making glycans an area of interest in SARS-CoV-2 biology and COVID-19 infection. The SARS-CoV-2 uses its highly glycosylated spike (S) glycoproteins to bind to the cell surface receptor angiotensin-converting enzyme 2 (ACE2) glycoprotein and facilitate host cell entry.

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Objectives: Hypertension and type 2 diabetes mellitus comorbidity (HDC) is common, which confers a higher risk of cardiovascular disease than the presence of either condition alone. Describing the underlying glycomic changes of immunoglobulin G (IgG) that predispose individuals to HDC may help develop novel protective immune-targeted and anti-inflammatory therapies. Therefore, we investigated glycosylation changes of IgG associated with HDC.

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  • Protein glycosylation involves attaching carbohydrates to proteins, which influences their structure and function, and abnormal glycosylation can indicate diseases before symptoms arise.
  • There is an increasing demand for reliable high-throughput methods for analyzing glycans at scale, especially since existing methods are limited to smaller analyses.
  • The study assessed the GlycoWorks RapiFluor-MS N-Glycan Kit combined with HILIC-UHPLC on 335 human plasma samples, demonstrating that the method is highly robust and repeatable, suitable for large-scale IgG N-glycan profiling.
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The study sought to determine the patterns of N-glycan profiles among Type 2 diabetes mellitus (T2DM) patients over a 6-month period. Biochemical and clinical data were obtained from 253 T2DM patients at baseline and follow-up. Ultra-performance liquid chromatography and statistical methods were applied for N-glycan profiling.

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  • * A study analyzing IgG N-glycome composition from 333 COVID-19 patients (166 severe and 167 mild) in Spain, Italy, and Portugal found significant differences in glycosylation patterns linked to disease severity.
  • * Specifically, severe cases showed a decrease in a type of sugar molecule (bisecting N-acetylglucosamine) on IgG, while variations in another sugar component (galactosylation) were also noted but were not statistically significant after further analysis.
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  • Immunoglobulin G (IgG) is the main type of antibody in the blood, with its structure and function influenced by sugar molecules called glycans, which vary with age and disease.
  • This study examined IgG glycosylation patterns across 5 populations, totaling over 10,000 samples, revealing that many glycan features are linked to country of residence, particularly monogalactosylation.
  • An association was found between low levels of galactosylation in individuals from developing countries and factors like inflammation and biological age, highlighting how environmental influences may impact health in these regions.
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