Publications by authors named "Tomoaki Muranaka"

The period of circadian clocks is maintained at close to 24 hours over a broad range of physiological temperatures due to temperature compensation of period length. Here, we show that the quantitative control of the core clock proteins TIMING OF CAB EXPRESSION 1 [TOC1; also known as PSEUDO-RESPONSE REGULATOR 1 (PRR1)] and PRR5 is crucial for temperature compensation in . The double mutant has a shortened period at higher temperatures, resulting in weak temperature compensation.

View Article and Find Full Text PDF

Plants sense and respond to environmental cues during 24 h fluctuations in their environment. This requires the integration of internal cues such as circadian timing with environmental cues such as light and temperature to elicit cellular responses through signal transduction. However, the integration and transduction of circadian and environmental signals by plants growing in natural environments remains poorly understood.

View Article and Find Full Text PDF

Evergreeness is a substantial strategy for temperate and boreal plants and is as common as deciduousness. However, whether evergreen plants switch foliage functions between seasons remains unknown. We conduct an in natura study of leaf senescence control in the evergreen perennial, Arabidopsis halleri.

View Article and Find Full Text PDF

The circadian clock is responsible for the temporal regulation of various physiological processes in plants. Individual cells contain a circadian oscillator consisting of a clock gene circuit that coordinates physiological rhythms within the plant body in an orderly manner. The coordination of time information has been studied from the perspective of cell-cell local coupling and long-distance communication between tissues based on the view that the behavior of circadian oscillators represents physiological rhythms.

View Article and Find Full Text PDF

Background And Aims: Plant propagules often possess specialized morphologies that facilitate dispersal across specific landscapes. In the fruit dimorphism of a coastal shrub, Scaevola taccada, individual plants produce either cork-morph or pulp-morph fruits. The former is buoyant and common on sandy beaches, whereas the latter does not float, is bird-dispersed, and is common on elevated sites such as slopes on sea cliffs and behind rocky shores.

View Article and Find Full Text PDF

Structure-based high-throughput screening of chemical compounds that target protein-protein interactions (PPIs) is a promising technology for gaining insight into how plant development is regulated, leading to many potential agricultural applications. At present, there are no examples of using high-throughput screening to identify chemicals that target plant transcriptional complexes, some of which are responsible for regulating multiple physiological functions. Florigen, a protein encoded by FLOWERING LOCUS T (FT), was initially identified as a molecule that promotes flowering and has since been shown to regulate flowering and other developmental phenomena such as tuber formation in potato (Solanum tuberosum).

View Article and Find Full Text PDF

Phenotypic variation is the basis for trait adaptation via evolutionary selection. However, the driving forces behind quantitative trait variations remain unclear owing to their complexity at the molecular level. This study focused on the natural variation of the free-running period (FRP) of the circadian clock because FRP is a determining factor of the phase phenotype of clock-dependent physiology.

View Article and Find Full Text PDF
Article Synopsis
  • Duckweeds are small aquatic plants known for their quick growth and are characterized by fronds, but the molecular processes behind their flower formation and frond development are not well understood.
  • The study focuses on the short-day duckweed (Nd) and tracks changes in frond and flower development, finding that cell proliferation is active in early frond growth, leading to the production of two different length stamens.
  • Using RNA sequencing, the researchers identified key genes involved in flowering, revealing that one gene promotes flowering while another suppresses it, pointing to a complex regulatory system in duckweed flowering.
View Article and Find Full Text PDF
Article Synopsis
  • - The study focused on the plant circadian oscillation system, utilizing a dual-color bioluminescence monitoring system to observe the circadian behavior of individual cells via two luciferase reporters: AtCCA1::LUC+ and CaMV35S::PtRLUC.
  • - The researchers introduced these reporters into duckweed cells and monitored the bioluminescence to compare rhythms, finding that AtCCA1::LUC+ exhibited a strong circadian rhythm while CaMV35S::PtRLUC displayed more variable, stochastic rhythms.
  • - The results indicated a decoupling of circadian behaviors between the two reporters, highlighting the capability of the dual-color system to study cell-to-cell variations in gene expression
View Article and Find Full Text PDF

Circadian rhythms produce a biological measure of the time of day. In plants, circadian regulation forms an essential adaptation to the fluctuating environment. Most of our knowledge of the molecular aspects of circadian regulation in plants is derived from laboratory experiments that are performed under controlled conditions.

View Article and Find Full Text PDF
Article Synopsis
  • The bioluminescent reporter system is a noninvasive tool for long-term gene expression monitoring, allowing researchers to study gene regulation and variability in individual cells.
  • A single-cell bioluminescent imaging system was developed for plants using transient gene transfection via particle bombardment, successfully applied to monitor duckweed cells' circadian rhythms for over a week.
  • The study outlines methods for gene transfection and high-sensitive imaging, creating a platform for analyzing gene expression patterns in individual cells within the same tissue.
View Article and Find Full Text PDF

We develop a semiotic scheme of time, in which time precipitates from the repeated succession of punctuating the progressive tense by the perfect tense. The underlying principle is communication among local participants. Time can thus be seen as a meaning-making, semiotic system in which different time codes are delineated, each having its own grammar and timekeeping.

View Article and Find Full Text PDF

The circadian clock is an endogenous timing system based on the self-sustained oscillation in individual cells. These cellular circadian clocks compose a multicellular circadian system working at respective levels of tissue, organ, plant body. However, how numerous cellular clocks are coordinated within a plant has been unclear.

View Article and Find Full Text PDF

Individual cells in a plant can work independently as circadian clocks, and their properties are the basis of various circadian phenomena. The behaviour of individual cellular clocks in Lemna gibba was orderly under 24-h light/dark cycles despite their heterogeneous free-running periods (FRPs). Here, we reveal the entrainment habits of heterogeneous cellular clocks using non-24-h light/dark cycles (T-cycles).

View Article and Find Full Text PDF

While angiosperm clocks can be described as an intricate network of interlocked transcriptional feedback loops, clocks of green algae have been modelled as a loop of only two genes. To investigate the transition from a simple clock in algae to a complex one in angiosperms, we performed an inventory of circadian clock genes in bryophytes and charophytes. Additionally, we performed functional characterization of putative core clock genes in the liverwort Marchantia polymorpha and the hornwort Anthoceros agrestis.

View Article and Find Full Text PDF

Recent advances in single-cell analysis have revealed the stochasticity and nongenetic heterogeneity inherent to cellular processes. However, our knowledge of the actual cellular behaviors in a living multicellular organism is still limited. By using a single-cell bioluminescence imaging technique on duckweed, Lemna gibba, we demonstrate that, under constant conditions, cells in the intact plant work as individual circadian clocks that oscillate with their own frequencies and respond independently to external stimuli.

View Article and Find Full Text PDF

Gene expression is a fundamental cellular process and expression dynamics are of great interest in life science. We succeeded in monitoring cellular gene expression in a duckweed plant, Lemna gibba, using bioluminescent reporters. Using particle bombardment, epidermal and mesophyll cells were transfected with the luciferase gene (luc+) under the control of a constitutive [Cauliflower mosaic virus 35S (CaMV35S)] and a rhythmic [Arabidopsis thaliana CIRCADIAN CLOCK ASSOCIATED 1 (AtCCA1)] promoter.

View Article and Find Full Text PDF