A ribosomal DNA-based framework for the detection and quantification of stress-sensitive nematode families in terrestrial habitats.

Indigenous communities of soil-resident nematodes have a high potential for soil health assessment as nematodes are diverse, abundant, trophically heterogeneous and easily extractable from soil. The conserved morphology of nematodes is the main operational reason for their under-exploitation as soil health indicators, and a user-friendly biosensor system should preferably be based on nonmorphological traits. More than 80% of the most environmental stress-sensitive nematode families belong to the orders Mononchida and Dorylaimida.

Phylum-wide analysis of SSU rDNA reveals deep phylogenetic relationships among nematodes and accelerated evolution toward crown Clades.

Inference of evolutionary relationships between nematodes is severely hampered by their conserved morphology, the high frequency of homoplasy, and the scarcity of phylum-wide molecular data. To study the origin of nematode radiation and to unravel the phylogenetic relationships between distantly related species, 339 nearly full-length small-subunit rDNA sequences were analyzed from a diverse range of nematodes. Bayesian inference revealed a backbone comprising 12 consecutive dichotomies that subdivided the phylum Nematoda into 12 clades.

Nematode indicators of organic enrichment.

The organisms of the soil food web, dependent on resources from plants or on amendment from other sources, respond characteristically to enrichment of their environment by organic matter. Primary consumers of the incoming substrate, including bacteria, fungi, plant-feeding nematodes, annelids, and some microarthropods, are entry-level indicators of enrichment. However, the quantification of abundance and biomass of this diverse group, as an indicator of resource status, requires a plethora of extraction and assessment techniques.

Effects of microelements on soil nematode assemblages seven years after contaminating an agricultural field.

Long-term effects of Cd, Cr, Cu, Se and Zn were studied 7 years after artificially contaminating plots of an agricultural field on a calcareous chernozem soil. Effects of three to four different contamination levels (originally 10, 30, 90 and 270 mg kg(-1)) were studied. Nematode density was significantly reduced by 90 and 270 mg kg(-1) Se as well as by 270 mg kg(-1) Cr, while 90 and 270 mg kg(-1) Se also reduced nematode generic richness.

The maturity index: an ecological measure of environmental disturbance based on nematode species composition.

Nematode assemblages constitute a potential instrument for assessing the quality of submersed, temporarily submersed, and terrestrial soils and for the development of an ecological typology and biomonitoring system. Interpretation of physical or pollution-induced disturbances has hitherto mainly been based on changes in diversity, dominance patterns or percentage of dorylaimids (Adenophorea). The maturity index, based on the nematode fauna, is proposed as a gauge of the condition of the soil ecosystem.