Publications by authors named "Timothy Benke"

Knowledge of the natural history of deficiency disorder (CDD) is limited to the results of cross-sectional analysis of largely pediatric cohorts. Assessment of outcomes in adulthood is critical for clinical decision-making and future precision medicine approaches but is challenging because of the diagnostic gap and duration of follow-up that would be required for prospective studies. We aimed to delineate the natural history retrospectively from adulthood.

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Pathogenic variants in the cyclin-dependent kinase-like 5 (CDKL5) gene are associated with CDKL5 deficiency disorder (CDD), a severe X-linked developmental and epileptic encephalopathy. Deletions affecting the 5' untranslated region (UTR) of CDKL5, which involve the noncoding exon 1 and/or alternatively spliced first exons (exons 1a-e), are uncommonly reported. We describe genetic and phenotypic characteristics for 15 individuals with CDKL5 partial gene deletions affecting the 5' UTR.

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Although long-term survival in Rett syndrome (RTT) has been observed, limited information on older people with RTT exists. We hypothesized that increased longevity in RTT would be associated with genetic variants in associated with milder severity, and that clinical features would not be static in older individuals. To address these hypotheses, we compared the distribution of variants and clinical severity between younger individuals with Classic RTT (under 30 years old) and older individuals (over 30 years old).

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Article Synopsis
  • Trofinetide was shown to be effective for treating Rett syndrome in a long-term study called LILAC-2, following a shorter study, LAVENDER, confirming its benefits over 32 months.
  • The study included 77 female participants aged 5-22, examining safety through adverse events and efficacy using specific rating scales, with diarrhea and COVID-19 being the most commonly reported side effects.
  • Caregivers expressed high satisfaction with trofinetide, noting significant improvements in their children's symptoms without any new safety issues arising during the extended treatment.
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  • Trofinetide, approved for treating Rett syndrome, showed continued efficacy and safety in the 40-week LILAC extension study following the initial 12-week LAVENDER trial.
  • A total of 154 female participants aged 5-21 received trofinetide, with common side effects including diarrhea and vomiting; diarrhea was the leading cause for treatment withdrawal.
  • Symptoms of Rett syndrome improved over the 40-week period, with no significant difference in safety profiles between LILAC and the previous LAVENDER study.
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  • The study aimed to identify specific EEG characteristics in individuals with Rett syndrome (RTT) to determine their potential as objective indicators of brain function.
  • EEG data were collected from 60 females with RTT and 26 neurotypical females, focusing on differences in brain activity and the correlation with clinical severity.
  • Findings showed that RTT participants exhibited greater amplitude variability and low-frequency brain activity, with consistent patterns in EEG power measures that correlated with clinical severity, supporting the use of EEG as an objective assessment tool for RTT.
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  • * The study focuses on 48 de novo missense variants in GRIN1, GRIN2A, and GRIN2B that affect the M3 transmembrane helix, identified in children with conditions like epilepsy and developmental delays.
  • * Most of these variants lead to a gain-of-function effect, promoting NMDAR channel activity, reinforcing the importance of the M3 region in receptor function, and providing insights into how certain drugs may affect these variant receptors.
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Rett syndrome is a severe neurodevelopmental disorder that affects about 1 in 10,000 females. Clinical trials of disease modifying therapies are on the rise, but there are few psychometrically sound caregiver-reported outcome measures available to assess treatment benefit. We report on a new caregiver-reported outcome measure, the Rett Caregiver Assessment of Symptom Severity (RCASS).

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Article Synopsis
  • - Trofinetide, approved for treating Rett syndrome in March 2023, was tested in a phase 3 study to evaluate its impact on communication abilities in females aged 5 to 20, with results showing caregivers prioritizing communication improvements.
  • - Participants were given either trofinetide or a placebo for 12 weeks, with communication outcomes measured using caregiver and clinician assessments, including the CSBS-DP-IT Social Composite score and ratings for nonverbal and verbal communication.
  • - Results indicated trofinetide significantly improved caregiver-rated communication compared to placebo, particularly in the CSBS-DP-IT score, suggesting its potential value for future research on communication in Rett syndrome and related disorders.
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AMPA receptors are members of the glutamate receptor family and mediate a fast component of excitatory synaptic transmission at virtually all central synapses. Thus, their functional characteristics are a critical determinant of brain function. We evaluate intolerance of each GRIA gene to genetic variation using 3DMTR and report here the functional consequences of 52 missense variants in GRIA1-4 identified in patients with various neurological disorders.

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Objective: Recent advances in the understanding of neurodevelopmental disorders such as Rett syndrome (RTT) have enabled the discovery of novel therapeutic approaches that require formal clinical evaluation of efficacy. Clinical trial success depends on outcome measures that assess clinical features that are most impactful for affected individuals. To determine the top concerns in RTT and RTT-related disorders we asked caregivers to list the top caregiver concerns to guide the development and selection of appropriate clinical trial outcome measures for these disorders.

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Aim: To differentiate phenotypic features of individuals with CDKL5 deficiency disorder (CDD) from those of individuals with other infantile-onset epilepsies.

Method: We performed a retrospective cohort study and ascertained individuals with CDD and comparison individuals with infantile-onset epilepsy who had epilepsy gene panel testing. We reviewed records, updated variant classifications, and compared phenotypic features.

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Article Synopsis
  • The Rett Syndrome Behaviour Questionnaire (RSBQ) is a key assessment tool, filled out by caregivers, that effectively measures the core features of Rett syndrome (RTT) in clinical studies.
  • It has demonstrated good inter-rater and test-retest reliability, helping to distinguish RTT from other intellectual disorders and validated for use in females with RTT.
  • Recent studies, including the phase 3 LAVENDER study, showed that the FDA-approved drug trofinetide significantly improved RSBQ scores compared to placebo, indicating a connection between behavioral improvements and overall clinical status in RTT patients.
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Advances in sequencing technology have generated a large amount of genetic data from patients with neurological conditions. These data have provided diagnosis of many rare diseases, including a number of pathogenic de novo missense variants in GRIN genes encoding N-methyl-d-aspartate receptors (NMDARs). To understand the ramifications for neurons and brain circuits affected by rare patient variants, functional analysis of the variant receptor is necessary in model systems.

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Rett syndrome is a rare, genetic neurodevelopmental disorder. Trofinetide is a synthetic analog of glycine-proline-glutamate, the N-terminal tripeptide of the insulin-like growth factor 1 protein, and has demonstrated clinical benefit in phase 2 studies in Rett syndrome. In this phase 3 study ( https://clinicaltrials.

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Calyx terminals make afferent synapses with type I hair cells in vestibular epithelia and express diverse ionic conductances that influence action potential generation and discharge regularity in vestibular afferent neurons. Here we investigated the expression of hyperpolarization-activated current () in calyx terminals in central and peripheral zones of mature gerbil crista slices, using whole cell patch-clamp recordings. Slowly activating was present in >80% calyces tested in both zones.

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Objective: We aimed to assess the treatment response of infantile-onset epileptic spasms (ES) in CDKL5 deficiency disorder (CDD) vs other etiologies.

Methods: We evaluated patients with ES from the CDKL5 Centers of Excellence and the National Infantile Spasms Consortium (NISC), with onset from 2 months to 2 years, treated with adrenocorticotropic hormone (ACTH), oral corticosteroids, vigabatrin, and/or the ketogenic diet. We excluded children with tuberous sclerosis complex, trisomy 21, or unknown etiology with normal development because of known differential treatment responses.

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Objective: Recent advances in the understanding of neurodevelopmental disorders such as Rett syndrome (RTT) has enabled development of novel therapeutic approaches that are currently undergoing clinical evaluation or are proposed to move into clinical development. Clinical trial success depends on outcome measures that assess clinical features that are most impactful for affected individuals. To determine the top concerns in RTT and RTT-related disorders we asked caregivers to list the top clinical concerns in order to gain information to guide the development and selection of outcome measures for future clinical trials.

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Article Synopsis
  • The study investigates the use of evoked potentials as potential biomarkers for clinical severity in rare neurodevelopmental disorders, specifically MECP2 duplication syndrome and FOXG1 syndrome, alongside previously studied conditions like Rett syndrome and CDKL5 deficiency disorder.* -
  • Researchers collected visual and auditory evoked potentials from participants across multiple sites, comparing them to age-matched individuals with other conditions to identify group-level differences and associations with clinical severity.* -
  • Findings indicated that visual evoked potentials (VEPs) were reduced in individuals with Rett syndrome, CDKL5 deficiency disorder, and MECP2 duplication syndrome, while auditory evoked potentials (AEPs) showed prolonged latency in MECP2 duplication and FOXG1 synd
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  • - The study aimed to evaluate how genetic diagnosis affects the medical management of individuals with early-onset epilepsy, as previous literature lacked concrete evidence in this area.
  • - Researchers analyzed 602 patients at Boston Children's Hospital who underwent genetic testing for epilepsy and found that 25% had a specific genetic cause; notably, 72% of these patients experienced changes in their medical management.
  • - Key findings indicated that genetic diagnosis influenced treatment decisions for 45% of patients, improved care coordination for 48%, and provided new prognosis information for 28% of individuals, highlighting significant benefits from genetic testing in managing epilepsy.
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Genetic alterations in autism spectrum disorders (ASD) frequently disrupt balance between synaptic excitation and inhibition and alter plasticity in the hippocampal CA1 region. Individuals with Timothy Syndrome (TS), a genetic disorder caused by Ca1.2 L-type Ca channel (LTCC) gain-of function mutations, such as G406R, exhibit social deficits, repetitive behaviors, and cognitive impairments characteristic of ASD that are phenocopied in TS2-neo mice expressing G406R.

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Article Synopsis
  • CDKL5 deficiency disorder is a serious condition with no specific treatments, and the study aims to find reliable biomarkers to evaluate new therapies.
  • Researchers measured brain activity through visual and auditory evoked potentials and EEG in 26 individuals with the disorder and compared their results to typically developing peers.
  • The study found that people with CDKL5 deficiency had lower visual evoked potential amplitudes, and specific EEG features correlated with disease severity, especially the theta/delta ratio, which was the strongest predictor of clinical severity.
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Background: Rett syndrome (RTT) is a neurodevelopmental disorder most often related to a pathogenic variant in the X-linked MECP2 gene. Internalizing behaviors appear to be common, but standard methods of diagnosing anxiety are not readily applied in this population which typically has cognitive impairment and limited expressive language. This study aims to describe the frequency of anxiety-like behavior and anxiolytic treatments along with associated clinical features in individuals with RTT.

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Rett syndrome is associated with severe functional impairments and many comorbidities, each in urgent need of treatments. Mutations in the MECP2 gene were identified as causing Rett syndrome in 1999. Over the past 20 years there has been an abundance of preclinical research with some studies leading to human clinical trials.

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Article Synopsis
  • - Rett syndrome (RTT) is a serious neurodevelopmental disorder without any approved treatments, but a phase 2 trial showed promising results for trofinetide, a drug that improved symptoms in females aged 5-15 compared to a placebo.
  • - A new phase 3 trial, called LAVENDER, will evaluate the safety and efficacy of trofinetide in 187 girls and women aged 5-20 using specific clinical scales to assess various aspects of the disorder.
  • - The research is designed to track changes in core RTT symptoms and could potentially provide the first strong evidence of a medication’s effectiveness for RTT, marking a significant step forward in treatment options.
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