Publications by authors named "Thomas Cummin"

Despite the effectiveness of immuno-chemotherapy, 40% of patients with diffuse large B-cell lymphoma (DLBCL) experience relapse or refractory disease. Longitudinal studies have previously focused on the mutational landscape of relapse but fell short of providing a consistent relapse-specific genetic signature. In our study, we have focused attention on the changes in GEP accompanying DLBCL relapse using archival paired diagnostic/relapse specimens from 38 de novo patients with DLBCL.

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Although the MYC oncogenic network represents an attractive therapeutic target for lymphoma, MYC inhibitors have been difficult to develop. Alternatively, inhibitors of epigenetic/ transcriptional regulators, particularly the bromodomain and extraterminal (BET) family, have been used to modulate MYC. However, current benzodiazepine-derivative BET inhibitors (BETi) elicit disappointing responses and dose-limiting toxicity in relapsed/refractory lymphoma, potentially because of enrichment of high-risk molecular features and chemical backbone-associated toxicities.

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Using a Burkitt lymphoma-like gene expression signature, we recently defined a high-risk molecular high-grade (MHG) group mainly within germinal centre B-cell like diffuse large B-cell lymphomas (GCB-DLBCL), which was enriched for MYC/BCL2 double-hit (MYC/BCL2-DH). The genetic basis underlying MHG-DLBCL and their aggressive clinical behaviour remain unknown. We investigated 697 cases of DLBCL, particularly those with MYC/BCL2-DH (n = 62) by targeted sequencing and gene expression profiling.

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Article Synopsis
  • Researchers studied how adding bortezomib, a drug, to standard treatment affects outcomes in patients with different subtypes of diffuse large B-cell lymphoma, which can be identified by their gene expressions.
  • The study, called REMoDL-B, was a phase 3 trial involving 107 cancer centers across the UK and Switzerland, focusing on patients with untreated lymphoma who met specific health criteria.
  • Patients first received standard treatment (R-CHOP) followed by gene-expression profiling to categorize their lymphoma subtype before being randomly assigned to either continue with just R-CHOP or add bortezomib to their treatment.
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Purpose: Biologic heterogeneity is a feature of diffuse large B-cell lymphoma (DLBCL), and the existence of a subgroup with poor prognosis and phenotypic proximity to Burkitt lymphoma is well known. Conventional cytogenetics identifies some patients with rearrangements of MYC and BCL2 and/or BCL6 (double-hit lymphomas) who are increasingly treated with more intensive chemotherapy, but a more biologically coherent and clinically useful definition of this group is required.

Patients And Methods: We defined a molecular high-grade (MHG) group by applying a gene expression-based classifier to 928 patients with DLBCL from a clinical trial that investigated the addition of bortezomib to standard rituximab plus cyclophosphamide, doxorubicin, vincristine, and prednisone (R-CHOP) therapy.

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Article Synopsis
  • DNA samples from formalin-fixed paraffin-embedded tissues are often degraded, leading to challenges in targeted sequencing due to false positives from PCR errors and cytosine deamination.
  • A study using the HaloPlexHS design found that DNA quality significantly impacts variant reproducibility, with optimal results in samples suitable for PCR of ≥400 bp, while lower qualities provided less reliable outcomes.
  • The research established a cut-off value of 20 alternative allele depth (AAD) for distinguishing reproducible variants, enabling a stratified approach for mutation screening based on DNA quality, thus improving the accuracy of detection in lymphoma cases.
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Diffuse large B-cell lymphoma (DLBCL) is the commonest aggressive non-Hodgkin lymphoma with approximately 5,000 cases annually in the UK. The R-CHOP (rituximab, cyclophosphamide, doxorubicin, vincristine and prednisolone) regimen has become the international standard of care with cure rates of around 75% and despite extensive studies aimed at improving the outcomes, R-CHOP has not been superseded. Those patients that do not respond to R-CHOP have a poor outlook.

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