Extended-spectrum β-lactamase-producing was isolated from an edible river fish, , which was sold in a market located in Vietnam. The genome sequence was obtained by using next-generation sequencing, which involved Oxford Nanopore and Illumina technologies. The 92 kb plasmid encodes the gene .
View Article and Find Full Text PDFMicrobiol Resour Announc
March 2024
Extended-spectrum β-lactamase-producing non-O1 was isolated from edible sp. in Vietnam. The genome sequence was sequenced using DNBSEQ-G400 and MinION Mk1b.
View Article and Find Full Text PDFSalmonella enterica SE20-C72-2 and Escherichia coli EC20-C72-1 were isolated from the edible fish Anabas testudineus in Vietnam. The chromosomes and plasmids from both strains were sequenced using Oxford Nanopore and Illumina sequencing. Plasmids approximately 250 kbp long, encoding and , were detected in both strains.
View Article and Find Full Text PDFCarbapenem-resistant Citrobacter freundii CF20-4P-1 and Escherichia coli EC20-4B-2 were isolated from edible in Vietnam. We present the draft genome sequences, and the complete plasmid genome sequencing was also performed by hybrid assembly sequencing of Oxford Nanopore and Illumina. The 137-kbp plasmid encoding the assembled was detected in both strains.
View Article and Find Full Text PDFTo investigate the interaction between and root microorganisms and its effects on the stability of forests, we collected rhizosphere and non-rhizosphere soil from natural and planted forests in Huanglong County of Shaanxi Province. The non-rhizosphere soil was used to analyze chemical properties, while the rhizosphere soil was used to isolate and purify phosphorus-solubilizing (organic and inorganic phosphorus) bacteria. We mea-sured the phosphate-solubilizing ability and identified those bacteria using DNA genes sequencing.
View Article and Find Full Text PDFInt J Environ Res Public Health
August 2019
Expected climatic changes likely elicit serious challenges for crop production. Therefore, it is indispensable to investigate the response of crop growth parameters and yield under temperature variability environments. The current experiment on chilli pepper growth was conducted in a field, rain-shelter plastic house, and plastic greenhouse, with accumulated temperatures of 2832 °C, 2967 °C, and 3105 °C in 2017; and 2944 °C, 3091 °C, and 3168 °C in 2018 growing seasons.
View Article and Find Full Text PDFTo investigate the dissemination of ESBL/pAmpC-producing E. coli within the food distribution system of Ho Chi Minh City (HCMC), Vietnam, the prevalence of ESBL/pAmpC-producing E. coli strains in chicken meat, pork, beef, and fish/shrimp samples obtained from slaughterhouses, a wholesale market, and supermarkets was examined.
View Article and Find Full Text PDFBioorg Med Chem Lett
August 2009
We developed a metal ion chelate-assisted ligation for SNP detection by microarray. An oligonucleotide probe was separated into two 9-10-mers bearing iminodiacetic residues at the gap point. Duplex formation with the DNA target was possible only if nickel ions were added, but a nucleotide substitution opposite the gap point prevented duplex formation.
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