A comparison of structure, bonding and non-covalent interactions of aryl halide and diarylhalonium halogen-bond donors.

Halogen bonding permeates many areas of chemistry. A wide range of halogen-bond donors including neutral, cationic, monovalent, and hypervalent have been developed and studied. In this work we used density functional theory (DFT), natural bond orbital (NBO) theory, and quantum theory of atoms in molecules (QTAIM) to analyze aryl halogen-bond donors that are neutral, cationic, monovalent and hypervalent and in each series we include the halogens Cl, Br, I, and At.

Synthesis, photophysical characterization, and aerobic redox reactivity of electron-rich tellurorhodamine photocatalysts.

Tellurorhodamine dyes are a class of self-sensitizing chromophores that we have previously shown can photocatalytically oxidize a variety of organic and inorganic compounds with visible light, oxygen, and water. A new series of tellurorhodamine chromophores containing electron donating moieties were synthesized to explore how different electron donating groups affect photophysical properties and catalyst function. The synthesized complexes 1B, 1C, and 1D contain increasingly electron-donating substituents (Me, -Butyl, OMe) on the xylene ring.

Photocatalytic aerobic oxidation of benzylic alcohols and concomitant hydrogen peroxide production.

The photochemical oxidation of benzylic alcohols using -hydroxyphthalimide (NHPI) catalyst, with Rose Bengal as a singlet oxygen photosensitizer, and the production of hydrogen peroxide (HO) under metal-free conditions is presented. Computational and experimental investigations support O as the oxidant that converts NHPI to the active radical intermediate phthalimide--oxyl (PINO). This is a green alternative to current methods of HO production.

Orbital analysis of bonding in diarylhalonium salts and relevance to periodic trends in structure and reactivity.

Diarylhalonium compounds provide new opportunities as reagents and catalysts in the field of organic synthesis. The three center, four electron (3c-4e) bond is a center piece of their reactivity, but structural variation among the diarylhaloniums, and in comparison with other λ-iodanes, indicates that the model needs refinement for broader applicability. We use a combination of Density Functional Theory (DFT), Natural Bond Orbital (NBO) Theory, and X-ray structure data to correlate bonding and structure for a λ-iodane and a series of diarylchloronium, bromonium, and iodonium salts, and their isoelectronic diarylchalcogen counterparts.

Computational investigation into intramolecular hydrogen bonding controlling the isomer formation and p of octahedral nickel(II) proton reduction catalysts.

This work demonstrates the impact of intramolecular hydrogen bonding (H-bonding) on the calculated p of octahedral tris-(pyridinethiolato)nickel(II), [Ni(PyS)3]-, proton reduction catalysts. Density Functional Theory (DFT) calculations on a [Ni(PyS)3]- catalyst, and eleven derivatives, demonstrate geometric isomer formation in the protonation step of the catalytic cycle. Through Quantum Theory of Atoms in Molecules (QTAIM), we show that the p of each isomer is driven by intramolecular H-bonding of the proton on the pyridyl nitrogen to a sulfur on a neighboring ligand.

Functionalized resorcinarenes effectively disrupt the aggregation of αA66-80 crystallin peptide related to cataracts.

Cataracts, an eye lens clouding disease, are debilitating and while operable, remain without a cure. αA66-80 crystallin peptide abundant in cataracted eye lenses contributes to aggregation of αA-crystallin protein leading to cataracts. Inspired by the versatility of macrocycles and programmable guest selectivity through discrete functionalizations, we report on three water-soluble ionic resorcinarene receptors (, , and ) that disrupt the aggregation of αA66-80 crystallin peptide.

The multifunctional dopamine D/D receptor agonists also possess inhibitory activity against the full-length tau441 protein aggregation.

Neurodegeneration leads to variety of diseases which are linked to aberrant protein or peptide aggregation, as a one possible mechanism. Hence, small drug molecules targeting aggregation are of interest. Tau protein aggregation is one of the biomarkers of neurodegenerative diseases and is a viable drug target.

Tellurorhodamine photocatalyzed aerobic oxidation of organo-silanes and phosphines by visible-light.

Tellurorhodamine, 9-mesityl-3,6-bis(dimethylamino)telluroxanthylium hexafluorophosphate (1), photocatalytically oxidizes aromatic and aliphatic silanes and triphenyl phosphine under mild aerobic conditions. Under irradiation with visible light, 1 can react with self-sensitized 1O2 to generate the active telluroxide oxidant (2). Silanes are oxidized to silanols and triphenyl phosphine is oxidized to triphenyl phoshine oxide either using 2, or 1 with aerobic irradiation.

Selective Electrochemical versus Chemical Oxidation of Bulky Phenol.

The electrochemical oxidation of selected tert-butylated phenols 2,6-di-tert-butyl-4-methylphenol (1), 2,6-di-tert-butylphenol (2), 2,4,6-tri-tert-butylphenol (3), 2-tert-butylphenol (4), and 4-tert-butylphenol (5) was studied in an aprotic environment using cyclic voltammetry, square-wave voltammetry, and UV-vis spectroscopy. All compounds exhibited irreversible oxidation of the corresponding phenol or phenolate ion. Compound 2 was selectively electrochemically oxidized, while other phenol analogues underwent mostly chemical oxidation.

Efficient Bimolecular Mechanism of Photochemical Hydrogen Production Using Halogenated Boron-Dipyrromethene (Bodipy) Dyes and a Bis(dimethylglyoxime) Cobalt(III) Complex.

A series of Boron-dipyrromethene (Bodipy) dyes were used as photosensitizers for photochemical hydrogen production in conjunction with [Co(III)(dmgH)2pyCl] (where dmgH = dimethylglyoximate, py = pyridine) as the catalyst and triethanolamine (TEOA) as the sacrificial electron donor. The Bodipy dyes are fully characterized by electrochemistry, X-ray crystallography, quantum chemistry calculations, femtosecond transient absorption, and time-resolved fluorescence, as well as in long-term hydrogen production assays. Consistent with other recent reports, only systems containing halogenated chromophores were active for hydrogen production, as the long-lived triplet state is necessary for efficient bimolecular electron transfer.

A doubly deprotonated diimine dioximate metalloligand as a synthon for multimetallic complex assembly.

An electrocatalytically active cobalt diimine monoxime monoximate complex was deprotonated by 1-methylimidazole affording a doubly deprotonated complex that serves as a versatile precursor for synthesis of a variety of multimetallic complexes with Co-Zn, -Cd, -Mn and -Ru coordination. These complexes were studied using a combination of spectroscopic, analytical and electrochemical techniques, revealing the electronic and structural parameters unique to this new class of compounds. The ability of these complexes to catalyze proton reduction was also investigated.

DFT analysis into the intermediates of nickel pyridinethiolate catalysed proton reduction.

Nickel pyridine 2-thiolate (Ni(PyS)3(-)) has shown good stability and activity as a H2 generation catalyst for use in solar energy storage. The experimentally proposed catalytic pathway is explored using DFT calculations. Free energy changes along the reaction coordinate, spin states, localization of charge and geometry of the intermediates were explored.

Evidence for the rapid conversion of primary photoexcitations to triplet states in seleno- and telluro- analogues of poly(3-hexylthiophene).

Broadband pump-probe spectroscopy is used to examine the ultrafast photophysics of the π-conjugated polymers poly(3-hexylselenophene) (P3HS) and poly(3-hexyltellurophene) (P3HTe) in solution. An excited-state absorption feature that we attribute to a transition in the triplet manifold appears on the picosecond time scale. Density functional theory (DFT) and time-dependent density functional theory (TD-DFT) calculations support this assignment.

Thermal and photoreductive elimination from the tellurium center of π-conjugated tellurophenes.

This study introduces small molecule tellurophenes that can undergo photoreductive elimination. A tellurophene compound with strong light absorption properties and extended π-conjugation, 2,5-bis[5-(N,N'-dihexylisoindigo)]tellurophene (1), has been synthesized. Halogen oxidative addition to the tellurium center from various halogen sources gives the dibromo- (1Br2) and dichloro- (1Cl2) adducts, leading to a red-shift in the optical absorption properties.

Reversible oxidation of a water-soluble tellurophene.

Oxidation of a novel water-soluble tellurophene [2,5-tellurophene-bisphenoxy(octaethylene glycol monomethyl ether)] by peroxide is electrochemically reversible. This tellurophene can also be oxidized by self-photosensitized singlet oxygen in an aqueous solution. The oxidized tellurophenes are studied by optical absorption spectroscopy, (1)H NMR, and electrochemistry.

Robust visible light photoswitching with ortho-thiol substituted azobenzenes.

Introduction of S-ethyl groups in all four ortho positions of azobenzene prevents reduction of the azo group by intracellular glutathione, while enhancing the absorptivity to ~10,000 M(-1) cm(-1) in the blue and green regions of the visible spectrum. cis-to-trans isomerization occurs thermally on the minutes timescale. Further, this substitution pattern permits switching with red light, a color that is more penetrating through biological tissues than other parts of the visible spectrum.

Photocatalytic hydrogen production from a noble metal free system based on a water soluble porphyrin derivative and a cobaloxime catalyst.

A combination of noble-metal free components, a water soluble porphyrin photosensitizer zinc meso-tetrakis(1-methylpyridinium-4-yl)porphyrin chloride [ZnTMPyP(4+)]Cl4 (1) with cobaloxime complex [Co(III)(dmgH)2(py)Cl] (2) as a catalyst, creates an efficient system for photochemical hydrogen production acting under visible light with 280 TONs. This is the first example of a water soluble porphyrin acting as a photosensitizer for cobaloxime catalysed H2 production.

Designing and refining Ni(II)diimine catalysts toward the controlled synthesis of electron-deficient conjugated polymers.

Electron-deficient π-conjugated polymers are important for organic electronics, yet the ability to polymerize electron-deficient monomers in a controlled manner is challenging. Here we show that Ni(II)diimine catalysts are well suited for the controlled polymerization of electron-deficient heterocycles. The relative stability of the calculated catalyst-monomer (or catalyst-chain end) complex directly influences the polymerization.

Photoswitching azo compounds in vivo with red light.

The photoisomerization of azobenzenes provides a general means for the photocontrol of molecular structure and function. For applications in vivo, however, the wavelength of irradiation required for trans-to-cis isomerization of azobenzenes is critical since UV and most visible wavelengths are strongly scattered by cells and tissues. We report here that azobenzene compounds in which all four positions ortho to the azo group are substituted with bulky electron-rich substituents can be effectively isomerized with red light (630-660 nm), a wavelength range that is orders of magnitude more penetrating through tissue than other parts of the visible spectrum.

Poly(3-alkyltellurophene)s are solution-processable polyheterocycles.

The synthesis and characterization of a series of poly(3-alkyltellurophene)s are described. Polymers are prepared by both electrochemical and Kumada catalyst transfer polymerization methods. These polymers have reasonably high molecular weights (M(n) = 5.

An Apparent Size-Exclusion Quantification Limit Reveals a Molecular Weight Limit in the Synthesis of Externally Initiated Polythiophenes.

We report the linear and nonlinear regions of the relationship between number average molecular weight determined by gel permeation chromatography (GPC) and H NMR end-group analysis for a series of -tolyl-initiated poly(3-hexylthiophene)s (P3HTs). For conjugated polymers with chains that are 39-138 repeat units in length (6.5-23 kDa), GPC systematically overestimates the number average molecular weight () by a factor of 1.

Ru-Pt and Ru-Pd heterobimetallic complexes based on a new ligand with two distinct chelate sites.

A new ligand p-[N-2-(2'-pyridyl)benzimidazolyl]-[N-2-(2'-pyridyl)indolyl]-benzene (L1) has been synthesized and fully characterized. L1 has two distinct chelating sites: one N,N-chelate site and one N,C-chelate site. This ligand has been found to be very effective in selective binding to two different metal ions.

Tellurophenes with delocalized π-systems and their extended valence adducts.

The π-conjugated 2,5-substituted tellurophene compounds 2,5-bis(2-(9,9-dihexylfluorene))tellurophene (1) and 2,5-diphenyltellurophene (3) were synthesized through ring closing reactions of 1,4-substituted butadiyne. The oxidative addition of Br(2) to tellurophene compounds 1 and 3 was studied through absorption spectroscopy, NMR, electrochemistry, X-ray crystallography, and density functional theory (DFT) calculations. When Br(2) adds to the tellurium center the absorption spectrum shifts to a lower energy.

Atomistic band gap engineering in donor-acceptor polymers.

We have synthesized a series of cyclopentadithiophene-benzochalcogenodiazole donor-acceptor (D-A) copolymers, wherein a single atom in the benzochalcogenodiazole unit is varied from sulfur to selenium to tellurium, which allows us to explicitly study sulfur to selenium to tellurium substitution in D-A copolymers for the first time. The synthesis of S- and Se-containing polymers is straightforward; however, Te-containing polymers must be prepared by postpolymerization single atom substitution. All of the polymers have the representative dual-band optical absorption profile, consisting of both a low- and high-energy optical transition.

Impact of ligand exchange in hydrogen production from cobaloxime-containing photocatalytic systems.

Ligand exchange on the Co(dmgH)(2)(py)Cl water reduction catalyst was explored under photocatalytic conditions. The photosensitizer fluorescein was connected to the catalyst through the axially coordinated pyridine. While this two-component complex produces H(2) from water under visible light irradiation in the presence of triethanolamine (TEOA), it is less active than a system containing separate fluorescein and [Co(III)(dmgH)(2)(py)Cl] components.