Publications by authors named "Thanh K Pham"

This study comprehensively explored the helix-stabilizing effects of amine-bearing hydrocarbon cross-links (ABXs), revealing their context-dependent nature influenced by various structural parameters. Notably, we identified a 9-atom ABX as a robust helix stabilizer, showcasing versatile synthetic adaptability while preserving peptide water solubility. Future investigations are imperative to fully exploit this system's potential and enrich our chemical toolkit for designing innovative peptide-based biomolecules.

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Article Synopsis
  • * These compounds were identified using advanced techniques like NMR spectroscopy and mass spectrometry, ensuring their structures were clearly defined.
  • * Tested on 3T3-L1 cells, compounds gycomol VN2 and various gycomosides were found to activate AMPK and ACC, suggesting their potential role in preventing obesity by influencing important metabolic pathways.
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Based on the previously reported 13-residue antibacterial peptide analog, brevinin-1EMa (FLGWLFKVASKVL, peptide B), we attempted to design a novel class of antiviral peptides. For this goal, we synthesized three peptides with different stapling positions (B-2S, B-8S, and B-5S). The most active antiviral peptide with the specific stapling position (B-5S) was further modified in combination with either cysteine (B-5S3C, B-5S7C, and B-5S10C) or hydrophilic amino acid substitution (Bsub and Bsub-5S).

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The N-capping box is a distinct helix-stabilizing motif frequently found in proteins. In this study, we examined a ruthenium-mediated intramolecular backbone to side chain macrocyclization as a rigidified mimicry of the N-capping box. Experimental data indicate that the 15-membered macrocycle formed by a hept-4-enoyl staple, which directly tethers the α-amino group of N1 residue and the α-carbon of N3 residue, is highly effective in stabilizing helical structures of short peptides.

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The chemical composition of King ex Chakrav. was investigated for the first time in this study. Nine dammarane glycosides (‒) were isolated from the EtOH extract of the aerial parts of .

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Two new abietane diterpenes, huperphlegmarin A-B (-), were isolated from the aerial parts of (L.) Rothm. (Lycopodiaceae), in addition to five known compounds including lycoxanthol (), 21β-hydroxyserrat-14-en-3β-yl acetate (), 21α-hydroxyserrat-14-en-3β-yl acetate (), 21α-hydroxyserrat-14-en-3β-ol (), and fawcettidine ().

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Esculentin-2EM is a 37-residue, cationic, amphipathic, α-helical antimicrobial peptide isolated from a Korean frog, Glandirama emeljanovi. Many studies revealed that truncation of this peptide results in substantial decreases in its antimicrobial activity. Lee and his colleagues have recently reported that a 23-residue esculentin-2EM analog containing a tryptophanyl substitution at position 16 showed a significant recovery of the antimicrobial activity of the parent peptide.

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