Publications by authors named "Takumi Sakamoto"

Article Synopsis
  • Imaging mass spectrometry (IMS) is essential for studying the distribution of molecules in samples, but handling large data sets can be time-consuming and resource-intensive.
  • This study introduced a high-resolution reconstruction technique using a window-based Adversarial Autoencoder (AAE) to improve the analysis of IMS data from mouse cerebellum and kidney tissues.
  • The AAE model outperformed traditional interpolation methods (Bilinear and Bicubic) in image quality, making it a promising tool for large-scale IMS research in animal organ studies.
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Pencil-core granulomas grow rapidly after a long incubation period, typically taking years to decades after penetration by the pencil core. However, colored pencil-core granulomas, which have different core components, have been reported to form just a few days after the core has pierced the skin. It is understood that this difference in incubation period is due to differences in reactivity to different types of foreign bodies.

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Mass spectrometry imaging (MSI) is essential for visualizing drug distribution, metabolites, and significant biomolecules in pharmacokinetic studies. This study mainly focuses on imipramine, a tricyclic antidepressant that affects endogenous metabolite concentrations. The aim was to use atmospheric pressure matrix-assisted laser desorption/ionization (AP-MALDI)-MSI combined with different dimensionality reduction methods to examine the distribution and impact of imipramine on endogenous metabolites in the brains of treated wild-type mice.

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Acute and chronic inflammation are common in patients with end-stage kidney disease (ESKD). So, the adsorption of pro-inflammatory cytokines by the hollow fiber of the dialysis membrane has been expected to modify the inflammatory dysregulation in ESKD patients. However, it remains to be determined in detail what molecules of fiber materials can preferably adsorb proteins from the circulating circuit.

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  • The sleep-low method aims to enhance exercise performance by promoting low-glycogen states during sleep; however, long-term carbohydrate restriction can lead to mental stress in athletes.
  • This study tested a short-term nighttime carbohydrate restriction approach to see if it could improve performance without the stress associated with longer dietary restrictions.
  • Twenty-two university student athletes were split into two groups: one that followed a nighttime carb-restricted diet and another that maintained their usual diet, with both groups engaging in daily running sessions for two weeks.
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  • - This study investigates how the movement of the liver during breathing affects the accuracy of stereotactic body radiation therapy (SBRT) for patients with spine metastasis, particularly looking at treatment plans for patients with liver lesions.
  • - Researchers analyzed treatment plans for 15 patients using CT scans taken during both inhalation and exhalation to assess how liver motion impacted radiation dosage delivered to the spine and surrounding tissues.
  • - Their findings suggest that without incorporating strategies like beam avoidance, the liver's movement can result in significant radiation dose discrepancies, especially affecting the spinal cord, highlighting the need for careful evaluation of respiratory management during treatment.
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  • Buerger disease, also known as thromboangiitis obliterans, causes inflammation in small- and medium-sized arteries, leading to serious issues like chronic limb-threatening ischaemia (CLTI) and potential limb amputation, even with smoking cessation and exercise.
  • A case study of a 72-year-old Japanese man with severe CLTI and renal issues showed improvement using low-intensity pulsed ultrasound (LIPUS) after conventional treatment failed.
  • LIPUS is a promising non-invasive treatment that may enhance blood flow and reduce symptoms in peripheral arterial disease, potentially preventing major amputations.
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Cholesterol is a primary lipid molecule in the brain that contains one-fourth of the total body cholesterol. Abnormal cholesterol homeostasis is associated with neurodegenerative disorders. Mass spectrometry imaging (MSI) technique is a powerful tool for studying lipidomics and metabolomics.

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Knowledge of gender-specific drug distributions in different organs are of great importance for personalized medicine and reducing toxicity. However, such drug distributions have not been well studied. In this study, we investigated potential differences in the distribution of imipramine and chloroquine, as well as their metabolites, between male and female kidneys.

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In the past decade, university students have become more sedentary. A sedentary lifestyle is associated with an increased risk of obesity and cardiovascular disease. Methods that decrease sedentary lifestyles, such as the use of standing desks to increase physical activity, have been extensively examined.

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Background: Details of improved gait ability after wide resection of soft tissue sarcomas that necessitate removal of portions of the quadricep muscle have not yet been reported. We describe a patient with improved gait ability following a rehabilitation program after wide resection of a soft tissue sarcoma that included four components of the quadricep muscle.

Case Presentation: An 85-year-old Japanese man underwent wide resection of an undifferentiated pleomorphic sarcoma that included portions of the quadriceps femoris muscle.

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In patients with unresectable non-small cell lung cancer, histological diagnosis is frequently based on small biopsy specimens unsuitable for histological diagnosis when they are severely crushed and do not retain their morphology. Therefore, establishing a novel diagnostic method independent of tissue morphology or conventional immunohistochemistry (IHC) markers is required. We analyzed the lipid profiles of resected primary lung adenocarcinoma (ADC) and squamous cell carcinoma (SQCC) specimens using liquid chromatography-tandem mass spectrometry.

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  • Brain function depends on quick electrical communication between neurons and synchrony of neural activity, with myelin sheaths playing a crucial role in this process.
  • The study explored how myelin lipid composition changes during different stages of motor learning in mice, finding that sphingomyelin increases early on, while galactosylceramide levels rise later on.
  • Inhibiting galactosylceramide synthesis related to myelin affects motor learning, indicating that adjustments in myelin lipid composition are important for effective learning processes.
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Society in eusocial insects is based on the reproductive division of labor, with a small number of reproductive individuals supported by a large number of nonreproductive individuals. Because inclusive fitness of all colony members depends on the survival and fertility of reproductive members, sterile members provide royals with special treatment. Here, we show that termite kings and queens each receive special food of a different composition from workers.

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Drug distribution studies in tissue are crucial for understanding the pharmacokinetics and potential toxicity of drugs. Recently, matrix-assisted laser desorption ionization-mass spectrometry imaging (MALDI-MSI) has gained attention for drug distribution studies due to its high sensitivity, label-free nature, and ability to distinguish between parent drugs, their metabolites, and endogenous molecules. Despite these advantages, achieving high spatial resolution in drug imaging is challenging.

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  • Glutamate is a key neurotransmitter present in over 90% of excitatory synapses in the human brain, but its metabolic pathways are complex and not completely understood.
  • The study focuses on two proteins, TTLL1 and TTLL7, responsible for tubulin polyglutamylation in the brain, which is linked to maintaining neuronal polarity.
  • Researchers created knockout mice for these proteins and discovered abnormal behaviors linked to increased glutamate levels in their brains, indicating that tubulin polyglutamylation may regulate glutamate and other amino acids in neurons.
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Cancer tissues reflect a greater number of pathological characteristics of cancer compared to cancer cells, so the evaluation of cancer tissues can be effective in determining cancer treatment strategies. Mass spectrometry imaging (MSI) can evaluate cancer tissues and even identify molecules while preserving spatial information. Cluster analysis of cancer tissues' MSI data is currently used to evaluate the phenotype heterogeneity of the tissues.

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Mass spectrometry imaging (MSI) allows us to visualize the spatial distribution of molecular components in a sample. A large amount of mass spectrometry data comprehensively provides molecular distributions. In this study, we focus on the information in the obtained data and use the Shannon entropy as a quantity to analyze MSI data.

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Background: Malalignment, knee laxity, and repetitive physical activity are considered biomechanical risk factors for knee osteoarthritis (KOA), though the correlation among these factors is poorly understood. The purpose of this study was to elucidate the relationship between knee laxity and alignment, and to determine the effects of repetitive physical activity on knee laxity in patients with KOA.

Methods: The study subjects were 68 patients with radiographic tibiofemoral KOA and 68 control subjects.

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Mass spectrometry imaging (MSI) is well-known for the non-labeling visualization of analytes, including drugs and their metabolites in biological samples. In this study, we applied three different tools of MSI, desorption electrospray ionization (DESI)-MSI, matrix-assisted laser desorption ionization (MALDI)-MSI, and a newly developed atmospheric pressure (AP)-MALDI-MSI known as iMScope QT for rapid mapping of imipramine, chloroquine, and their metabolites in C57BL/6 male wild-type mice. Among three MSI tools, better detection capability for targeted drugs at higher speed (up to 32 pixels/s) was observed in iMScope QT.

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The characteristic patterns of mass spectra in imaging mass spectrometry (IMS) strongly reflect the tissue environment. However, the boundaries formed where different tissue environments collide have not been visually assessed. In this study, IMS and convolutional neural network (CNN), one of the deep learning methods, were applied to the extraction of characteristic mass spectra patterns from training brain regions on rodents' brain sections.

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Photoisomerization of lipids has been well studied. As for the eyes, photoisomerization from 11-cis isomer to all-trans-retinal is well-known as the first step of the visual transduction in the photoreceptors. In addition to that, there would be other ocular lipids that undergo photoisomerization, which may be involved in ocular health and function.

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Background: Mass spectrometry (MS) analysis using direct infusion of biological fluids is often problematic due to high salts/buffers. Iodinated contrast media (ICM) are frequently used for diagnostic imaging purposes, sometimes inducing acute kidney injury (AKI) in patients with reduced kidney function. Therefore, detection of ICM in spent hemodialysates is important for AKI patients who require urgent continuous hemodiafiltration (CHDF) because it allows noninvasive assessment of the patient's treatment.

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