Publications by authors named "Takanobu A Katoh"

Recent advancements in microscopic techniques have significantly progressed, with improvements in fundamental parameters such as resolution, as well as the emergence of novel imaging techniques for measuring cellular information. In this session, six invited speakers introduced recent advancements in super-resolution and advanced microscopy imaging, covering both the development of novel microscopy techniques and their biological applications.

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Background: Mouse nodal immotile cilia mechanically sense the bending direction for left-right (L-R) determination and activate the left-side-specific signaling cascade, leading to increased Nodal activity. Asymmetric distribution of Pkd2, a crucial channel for L-R determination, on immotile cilia has been reported recently. However, the causal relationship between the asymmetric Pkd2 distribution and direction-dependent flow sensing is not well understood.

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Morphogenesis is a developmental process of organisms being shaped through complex and cooperative cellular movements. To understand the interplay between genetic programs and the resulting multicellular morphogenesis, it is essential to characterize the morphologies and dynamics at the single-cell level and to understand how physical forces serve as both signaling components and driving forces of tissue deformations. In recent years, advances in microscopy techniques have led to improvements in imaging speed, resolution and depth.

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Article Synopsis
  • * Researchers discovered that a mutation in the ANKS3 protein causes symmetric mRNA decay by altering the interaction with Bicc1, leading to a loss of asymmetric signaling.
  • * The findings highlight a new mechanism in which ANKS3, influenced by ANKS6, regulates the binding of mRNAs through its protein structure, linking this regulation to potential developmental defects and ciliopathies.
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Immotile cilia of crown cells at the node of mouse embryos are required for sensing leftward fluid flow that gives rise to the breaking of left-right (L-R) symmetry. The flow-sensing mechanism has long remained elusive, mainly because of difficulties inherent in manipulating and precisely analyzing the cilium. Recent progress in optical microscopy and biophysical analysis has allowed us to study the mechanical signals involving primary cilia.

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Immotile cilia at the ventral node of mouse embryos are required for sensing leftward fluid flow that breaks left-right symmetry of the body. However, the flow-sensing mechanism has long remained elusive. In this work, we show that immotile cilia at the node undergo asymmetric deformation along the dorsoventral axis in response to the flow.

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For left-right symmetry breaking in the mouse embryo, the basal body must become positioned at the posterior side of node cells, but the precise mechanism for this has remained unknown. Here, we examined the role of microtubules (MTs) and actomyosin in this basal body positioning. Exposure of mouse embryos to agents that stabilize or destabilize MTs or F-actin impaired such positioning.

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The sarcoendoplasmic reticulum Ca-ATPase (SERCA) transports Ca ions across the membrane coupled with ATP hydrolysis. Crystal structures of ligand-stabilized molecules indicate that the movement of actuator (A) domain plays a crucial role in Ca translocation. However, the actual structural movements during the transitions between intermediates remain uncertain, in particular, the structure of E2PCa has not been solved.

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Article Synopsis
  • - The study focuses on how leftward fluid flow in the mouse embryo's node influences the breakdown of Dand5 mRNA, crucial for establishing left-right asymmetry during development.
  • - It was found that the first 200 nucleotides of Dand5's 3' untranslated region (3'-UTR) are essential for its left-sided degradation, responding to factors like Ca ions, the cation channel Pkd2, and the RNA-binding protein Bicc1.
  • - Bicc1 interacts with specific RNA sequences and works with the Cnot3 component of the Ccr4-Not deadenylase complex to facilitate left-sided Dand5 mRNA decay when prompted by fluid flow.
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Article Synopsis
  • Immotile cilia in mouse embryos help sense fluid flow and play a role in breaking left-right (L-R) symmetry through calcium (Ca) signaling.
  • Intraciliary and cytoplasmic Ca transients were identified in crown cells, showing that these signals are asymmetrically biased and rely on fluid flow and the PKD2 channel.
  • The study categorized the Ca transients into two types, revealing that type 1 (L-R asymmetric) signals are crucial for initiating L-R symmetry breaking, particularly in the left posterior region of the node.
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Cluap1/IFT38 is a ciliary protein that belongs to the IFT-B complex and is required for ciliogenesis. In this study, we have examined the behaviors of Cluap1 protein in nonciliated and ciliated cells. In proliferating cells, Cluap1 is located at the distal appendage of the mother centriole.

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To study the properties of tracheal cilia beating under various conditions, we developed a method to monitor the movement of the ciliary tip. One end of a demembranated cilium was immobilized on the glass surface, while the other end was capped with a polystyrene bead and tracked in three dimensions. The cilium, when activated by ATP, stably repeated asymmetric beating as in vivo.

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