Publications by authors named "Tae-Jin Choi"

A six-week feeding trial was conducted to assess the safety of single-domain antibodies (sdAbs) derived from camelids against the white spot syndrome virus (WSSV) (WSSVvp28 was used as the antigen), focusing on the whole-organism responses and molecular-level changes in juvenile whiteleg shrimp (). Five experimental diets with varying levels of sdAbs were formulated: CON (no sdAb supplementation); SDA (8.20% of sdAbs); SDA (16.

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The white spot syndrome virus (WSSV) is the causative agent of white spot disease, which kills shrimp within a few days of infection. Although WSSV has a mortality rate of almost 100% and poses a serious threat to the shrimp farming industry, strategies for its prevention and treatment are extremely limited. In this study, we examined the efficacy of VP28, a recombinant WSSV protein expressed in (), as an oral shrimp vaccine.

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The demand for aquaculture is increasing, but production is declining due to high feed costs and disease outbreaks. Viral hemorrhagic septicemia (VHS) is a viral disease that seriously affects seawater and freshwater fish in aquaculture, including the olive flounder (), a major aquaculture fish in Korea. However, very few vaccines are currently available for viral hemorrhagic septicemia virus (VHSV).

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is a eukaryotic organism that can be used as an industrial host to produce recombinant proteins. In this study, a salt-inducible promoter (SIP) was isolated from the freshwater species PKVL7422 from the screening of genes that were upregulated after salt treatment. Several -acting elements, including stress response elements, were identified in the isolated SIP.

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Article Synopsis
  • * Advances in sequencing technologies have revitalized interest in phages, but there are still hurdles to overcome for their practical use in combating pathogenic bacteria.
  • * The review discusses the nature of bacteriophages, strategies for their application, and the need for further research to develop safe alternatives to traditional antibiotics.
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Bacteriophages infecting Acidovorax citrulli, the causal agent of bacterial fruit blotch, have been proven to be effective for the prevention and control of this disease. However, the occurrence of bacteriophage-resistant bacteria is one of hurdles in phage biocontrol and the understanding of phage resistance in this bacterium is an essential step. In this study, we aim to investigate possible phage resistance of A.

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has recently emerged as a widely infective and destructive pathogen causing soft-rot disease in various vegetables. Bacteriophage phiPccP-1 isolated from Pyeongchang, South Korea, showed lytic activity against Pco14 and two other species. The transmission electron microscopy and genome phylograms revealed that phiPccP-1 belongs to the genus, subfamily of the family.

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Article Synopsis
  • Semisulcospira gottschei is a freshwater and marine species native to Korea and China, but its genetic diversity has not been deeply studied previously.
  • This research sequenced mitochondrial DNA and analyzed microsatellite markers to explore the genetic structures of S. gottschei populations, finding 43 distinct haplotypes that indicated no gene flow between the Korean and Chinese groups.
  • The study revealed significant genetic diversity within populations, forming two distinct clusters that could aid in managing and restoring these populations, helping to differentiate their origins for conservation efforts.
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Background: A lineage of Klebsiella pneumoniae that produces carbapenemase-2 (KPC-2), sequence type (ST) 307, emerged in 2017. We analyzed the complete sequences of plasmids from KPC-2-producing K. pneumoniae (KPC-Kp) ST307, investigated the antimicrobial resistance conferred by this strain, and confirmed the horizontal interspecies transmission of KPC-carbapenemase-producing Enterobacteriaceae (CPE) characteristics among Enterobacteriaceae.

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Sequence type 410 (ST410) of is an extraintestinal pathogen associated with multi drug resistance. In this study, we aimed to investigate the horizontal propagation pathway of a highrisk clone of ST410 that produces carbapenemase (KPC). blaKPCencoding and isolates were evaluated, and complete sequencing and comparative analysis of blaKPC-encoding plasmids from and , antimicrobial susceptibility tests, polymerase chain reaction, multilocus sequence typing, and conjugal transfer of plasmids were performed.

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Bacterial fruit blotch (BFB) is an economically important disease in melons and watermelons for which no effective control method is available. Application of phytobacterium-infecting phage has been evaluated as an alternative means of preventing bacterial diseases in plants. Coating of seeds with bacteriophages infecting , the causal agent of BFB, is effective for controlling the disease, as shown in our previous study.

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Article Synopsis
  • * Akh-2 belongs to the Siphoviridae family, has specific head and tail sizes, and exhibits a latent period of about 50 minutes, with a burst size indicating a strong ability to infect and replicate within host cells.
  • * In experiments, loach fish treated with Akh-2 had higher survival rates during disease induction compared to untreated fish, suggesting its potential use in treating infections in aquatic animals.
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  • Acidovorax citrulli is a gram-negative bacteria responsible for bacterial fruit blotch (BFB), causing significant economic losses in watermelon and melon production since 1980, with no resistant cultivars available.
  • Researchers isolated a new bacteriophage, ACPWH, which effectively targets A. citrulli; it can infect 39 out of 42 strains and has specific size and genetic characteristics.
  • Coating watermelon seeds with ACPWH before inoculation resulted in a 96% germination and survival rate, indicating its potential as a low-cost biocontrol strategy against BFB.
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Chlorella vulgaris is an important freshwater alga that is widely used as a food source for humans and animals. High-salinity environments can cause accumulation of lipids and proteins in this species, but the mechanism of this accumulation and the salt response remain unclear. In this work, transcriptome analysis was performed for the C.

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A compressible microporous polymer monolith (MPM) was prepared by performing the Sonogashira-Hagihara reaction between 1,4-diiodobenzene and 1,3,5-triethynylbenzene in a gel state without stirring. MPM was functionalized via the click reaction with 1,3,5-tris(azidomethyl)-2,4,6-trimethylbenzene and 2,6-diethynylpyridine. MPM showed superhydrophobicity but became hydrophilic after the click reaction.

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Viral replicon particles are single-cycle viruses defective for function(s) needed for viral replication, which allow them to be recognized as a safer form for the vaccination of animals compared to attenuated live viruses. However, deletion of genes that are critical for the induction of protective immunity can diminish the vaccine potential of viral replicon particles. Therefore, the manipulation of viral replicon particles to produce a molecular adjuvant can be a way to increase immunogenicity of vaccines based on viral replicon particles.

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Recombinant flounder growth hormone was overproduced in by using codon optimized synthetic gene and optimized expression conditions for high level production. The gene was cloned into PET-28a expression vector and transformed into BL21 (DE3). Induction at lower temperature, lower IPTG concentrations and richer growth media during expression resulted in increased expression level.

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A highly accurate quantitative method, based on the new technique, droplet digital PCR (ddPCR), was applied to determine the content of Alaska pollock (Gadus chalcogrammus) in seafood products. Using this method, we found a linear relationship among raw sample weight, DNA concentration and DNA copy number. We also established a formula to calculate the raw sample weight, based on the number of DNA copies.

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Background: is a fish pathogen that causes severe economic losses worldwide. Virkon-S is a well-known disinfectant known to exhibit antimicrobial activities against bacteria, viruses, and fungi. In this study, we tested the anti-fungal activity of Virkon-S against .

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Article Synopsis
  • Bacteriophages were isolated from 39 samples of watermelon, pumpkin, and cucumber leaves in Korea to study the bacterial fruit blotch disease caused by a specific bacterium.
  • One of the isolated phages, named ACP17, has unique characteristics, including a large plaque, specific dimensions (head diameter of 100 nm and tail length of 150 nm), and notable growth metrics with an eclipse period of 25 minutes and a burst size of 120.
  • The genome of ACP17 consists of 156,281 base pairs and features 263 open reading frames, indicating that it is a new type of phage with limited similarity to existing phages based on phylogenetic analysis.
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Despite large economic losses attributable to white spot syndrome virus (WSSV), an infectious pathogen of penaeid shrimp and other crustaceans worldwide, no efficient vaccines or antiviral agents to control the virus are available at present. Here, we designed and constructed baculovirus-based vaccines delivering genes encoding the WSSV envelope proteins, VP28 and VP19. To enhance the immunogenicity of the baculovirus-based vaccine, we fused a Salmonella typhimurium flagellin 2 (FL2) gene with VP28 or VP19 gene.

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The antiviral activity of an extract mixture from Celosia cristata and Raphanus sativus was tested against viral hemorrhagic septicemia virus (VHSV). Pretreatment of EPC cells with this extract up to 72 h before VHSV infection markedly reduced the virus titer, but it had no effect when added after virus inoculation. In olive flounder that received 5 µg of extract per fish, Mx expression peaked at 48 h after treatment.

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Several species were isolated from rice field soils, and 16S rRNA gene sequence analysis showed that was the most abundant. A strain named BC1 showed antifungal activity against . Bacteriophages infecting strain BC1 were isolated from the same soil sample.

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Article Synopsis
  • Diatoms are crucial for aquatic ecosystems as they produce oxygen and serve as primary producers in the food web.
  • The study introduces a new virus, ScosV, that infects the abundant diatom species Skeletonema costatum, found in Jaran Bay, Korea.
  • ScosV, a polyhedral virus, affects S. costatum by causing cell lysis, with a burst size of about 90-250 infectious units per cell and a latent period of less than 48 hours.
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A microporous polymer with sulfide and thiol groups was synthesized using the thiol-yne reaction. Au nanoparticles were prepared by in situ reduction reaction inside the polymer and were found to be well dispersed. The Au-containing polymer showed catalytic activity in the reduction of 4-nitrophenol.

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