Publications by authors named "T Strugnell"

Article Synopsis
  • mRNA-based vaccines and therapeutics are increasingly used, and optimizing the mRNA sequence is critical for their effectiveness.
  • CodonBERT, a large language model designed specifically for mRNAs, uses codons to improve understanding and predictions regarding mRNA properties.
  • Trained on over 10 million mRNA sequences from various organisms, CodonBERT outperforms previous prediction methods, including in the context of a new flu vaccine data set.
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Human H3N2 influenza viruses are subject to rapid antigenic evolution which translates into frequent updates of the composition of seasonal influenza vaccines. Despite these updates, the effectiveness of influenza vaccines against H3N2-associated disease is suboptimal. Seasonal influenza vaccines primarily induce hemagglutinin-specific antibody responses.

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Seasonal influenza remains a serious public health concern as the viral infection spreads easily from person to person and due to antigenic drift of neutralizing epitopes. Vaccination is the best method for disease prevention, however current seasonal influenza vaccines stimulate antibodies which are often effective against only antigenically similar strains. To boost the immune responses and increase vaccine effectiveness, adjuvants have been used for the past 20 years.

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