The meaning of ubiquitylation of the DSL ligand Delta for the development of Drosophila.

Background: Ubiquitylation (ubi) of the intracellular domain of the Notch ligand Delta (Dl) by the E3 ligases Neuralized (Neur) and Mindbomb1 (Mib1) on lysines (Ks) is thought to be essential for the its signalling activity. Nevertheless, we have previously shown that DlK2R-HA, a Dl variant where all Ks in its intracellular domain (ICD) are replaced by the structurally similar arginine (R), still possess weak activity if over-expressed. This suggests that ubi is not absolutely required for Dl signalling.

Corrigendum to 'Modeling mixoplankton along the biogeochemical gradient of the Southern North Sea' Ecological Modelling 458 (2021) 0304-3800/109690.

[This corrects the article DOI: 10.1016/j.ecolmodel.

Cis-inhibition suppresses basal Notch signaling during sensory organ precursor selection.

The emergence of the sensory organ precursor (SOP) from an equivalence group in is a paradigm for studying single-cell fate specification through Notch-mediated lateral inhibition. Yet, it remains unclear how only a single SOP is selected from a relatively large group of cells. We show here that a critical aspect of SOP selection is controlled by cis-inhibition (CI), whereby the Notch ligands, Delta (Dl), cis-inhibit Notch receptors in the same cell.

Modeling mixoplankton along the biogeochemical gradient of the Southern North Sea.

The ecological importance of mixoplankton within marine protist communities is slowly being recognized. However, most aquatic ecosystem models do not include formulations to model a complete protist community consisting of phytoplankton, protozooplankton and mixoplankton. We introduce PROTIST, a new module for the aquatic ecosystem modelling software Delft3D-WAQ that can model a protist community consisting of two types of phytoplankton (diatoms and green algae), two types of mixoplankton (constitutive mixoplankton and non-constitutive mixoplankton) and protozooplankton.