Publications by authors named "Sylvain Godreuil"

Article Synopsis
  • - The study investigates the prevalence of antibiotic-resistant extended-spectrum beta-lactamase (ESBL) in children under 5 suffering from diarrhea in public hospitals in Franceville, Gabon, an area lacking previous research on this topic.
  • - Researchers collected and analyzed 70 fecal samples from young children, identifying 26 strains of bacteria (33.0%) that produced ESBLs, with the majority carrying the bla gene.
  • - The findings reveal a high occurrence of ESBL-producing bacteria, primarily from phylogroup D, indicating potential issues related to the improper use of beta-lactam antibiotics among these children.
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  • - The study aimed to explore how the hospital environment contributes to Pseudomonas aeruginosa bloodstream infections (BSIs) in patients who have been hospitalized for over 48 hours in a tertiary-care hospital.
  • - Researchers examined clinical records and conducted environmental investigations to identify sources of contamination, finding that most patients were male, older, and had prior antibiotic use, with the main infection routes being urinary and cutaneous.
  • - Although the environment was suspected to be a major source of these infections, only 15% of nosocomial BSIs were linked to the hospital, suggesting that Pseudomonas might have transitioned to being more of a community-acquired pathogen rather than strictly a hospital-related one.
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Recent interest in noninvasive diagnostic approaches has highlighted the potential of urinary microbiota as a novel biomarker for bladder cancer. This study investigated the urinary microbiota of 30 bladder cancer patients and 32 healthy controls using a specific NGS protocol that sequences eight hypervariable regions of the 16S rRNA gene, providing detailed insights into urinary microbiota composition. The relative abundance of microbial compositions in urine samples from cancer patients and healthy controls was analyzed across various taxonomic levels.

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Zoopharmacognosy is the study of the self-medication behaviors of non-human animals that use plant, animal or soil items as remedies. Recent studies have shown that some of the plants employed by animals may also be used for the same therapeutic purposes in humans. The aim of this study was to determine the antioxidant and antibacterial activity of Ceiba pentandra, Myrianthus arboreus, Ficus subspecies (ssp.

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Staphylococcus aureus is a pathogen with high epidemic potential frequently involved in nosocomials and communities infections. The pathogenicity of Staphylococcus aureus is due to both its ability to resist antibiotics and to Produce toxins. This work aims at studying the resistance and Molecular Epidemiology of Staphylococcus aureus.

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Article Synopsis
  • - The study investigated the presence of antibiotic-resistant genes (ESBL and carbapenemase) in environmental bacteria from two locations in Bobo-Dioulasso, Burkina Faso, focusing on samples from a hospital and a wastewater treatment facility.
  • - Out of 180 bacterial isolates collected, 100% were found to produce extended-spectrum beta-lactamases (ESBLs), while 10% produced carbapenemases, with Klebsiella species being the most commonly identified bacteria.
  • - Results indicated a significant prevalence of the bla-CTX-M resistance gene, particularly from hospital effluents, suggesting a critical need for effective treatment systems for hospital waste to manage the spread of antibiotic-resistant bacteria in urban areas.
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The early administration of appropriate antibiotic therapy is crucial for the survival of patients with bacteremia. Current research focuses on improving analytical times through technology, whereas there have been very few efforts to improve postanalytical times even though they represent 40% of the time between blood taking and appropriate treatment administration. One of the clues is the efficiency and appropriateness of the result communication system.

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Enterobacterales of clinical importance for humans and domestic animals are now commonly detected among wildlife worldwide. However, few studies have investigated their prevalence among bats, particularly in bat species living near humans. In this study, we assessed the occurrence of Extended-spectrum beta-lactamase-producing (ESBL) and carbapenemase-resistant (CR) Enterobacterales in rectal swabs of bats submitted to the Chilean national rabies surveillance program from 2021 to 2022.

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Article Synopsis
  • Carbapenem resistance poses a significant public health risk in sub-Saharan Africa, particularly at the intersections of human, animal, and environmental factors, as shown in a study conducted in Djibouti City.
  • The study analyzed 1650 samples, including urine, hospital specimens, livestock feces, fish, and water, revealing a low overall prevalence of 1.9% CP-GNB, with higher rates in fish (11.7%) and water (10%).
  • Genome sequencing identified key bacterial species associated with resistance and indicated the presence of epidemic clones, suggesting horizontal gene transfer plays a role in the spread of carbapenem resistance across different environments.
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  • - The study addresses the issue of antibiotic resistance in Central Africa, highlighting the lack of data due to limited research, and focuses on creating a comprehensive overview of resistance in humans, animals, and environmental samples.
  • - A systematic review of literature from 2005 to 2020 identified 517 studies, with 60 relevant studies being analyzed from eight Central African countries, revealing various resistance genes, particularly beta-lactamase and carbapenemase.
  • - The findings emphasize the need for improved data gathering and health policies using a 'One Health' approach to effectively combat antibiotic resistance in the region.
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Timely diagnosis of Pulmonary Tuberculosis (PTB) is associated with good prognosis, but remains difficult in primary healthcare facilities and particularly in children and patients living with HIV. The aim of this study was to compare the GeneXpert ® MTB/RIF assay (Xpert) performed using a stool sample (3-5 g) and using the first Respiratory Tract Sample (RTS; i.e.

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Macroplastics are ubiquitous in aquaculture ecosystems. However, to date the potential role of plastics as a support for bacterial biofilm that can include potential human pathogenic bacteria (PHPB) and antibiotic-resistant bacteria (ARB) has been largely overlooked. In this study, we used a combination of metabarcoding and standard antibiotic susceptibility testing to study the pathobiome and resistome of macroplastics, fish guts and the environment in a marine aquaculture farm in Mauritius.

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  • Global antimicrobial resistance (AMR) surveillance in Neisseria gonorrhoeae is crucial, with only 10.6% of WHO African Region countries reporting in 2017-18; this study focuses on genomic diversity and AMR determinants in Uganda, Malawi, and South Africa from 2015-2020.
  • Gonococcal isolates from these countries were sequenced, revealing high resistance to ciprofloxacin (57.1%-100%), while most strains were susceptible to ceftriaxone, cefixime, and spectinomycin.
  • The findings indicate a need for stronger AMR surveillance in gonorrhea due to high ciprofloxacin resistance and emerging azithromycin resistance, supporting WHO’s Global
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  • The study investigated the presence of anti-SARS-CoV-2 IgG antibodies among people living with HIV (PLWHIV) in Burkina Faso within the first year of the COVID-19 outbreak, focusing on various risk factors.
  • A total of 419 plasma samples were examined, revealing a seroprevalence rate of 31% for anti-SARS-CoV-2 IgG, with no participants vaccinated during the sample collection period.
  • Findings indicated that individuals on integrase inhibitors had a higher likelihood of SARS-CoV-2 infection compared to those on non-nucleoside reverse transcriptase inhibitors, highlighting the need for further research on the implications of HIV treatment regimens in the context of COVID-19.
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Article Synopsis
  • * Researchers in France from 2000 to 2010 used genetic typing methods to study the diversity of this pathogen in humans, cattle, and wildlife, revealing varied genetic patterns.
  • * Findings indicate that most human infections likely originated abroad or were reactivations rather than local strains, yet some genetic similarities between human and cattle isolates were identified, highlighting the need for global control efforts.
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Background: An issue of particular concern is the impact of the 2019 novel coronavirus (2019 nCOV) on the people coinfected with the Human Immuno-deficiency Virus (HIV) and/or tuberculosis (TB). Unfortunately, this interaction has not been well explored in African despite the large proportion of these risk populations living with HIV and/or patients and/or tuberculosis (TB) in the African region. This study aims to design a research protocol for assessment of the impact of coronavirus disease 2019 (COVID-19) on these risk populations in response to COVID-19 strategic plans in Burkina Faso by generating serological, epidemiological, virological, clinical and socio-anthropological evidence-based data.

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Engineered bacteria are promising candidates for in situ detection and treatment of diseases. The female uro-genital tract presents several pathologies, such as sexually transmitted diseases or genital cancer, that could benefit from such technology. While bacteria from the gut microbiome are increasingly engineered, the use of chassis isolated from the female uro-genital resident flora has been limited.

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  • This study focuses on the genomic epidemiology of SARS-CoV-2 in Burkina Faso, analyzing 377 viral genomes collected from May 2020 to January 2022.
  • The research identified 10 phylogenetic clades and 27 Pango lineages, emphasizing how cross-border movement significantly contributed to the virus's introduction in the country.
  • The findings underscore the need for preventive policies and regional cooperation to help contain future outbreaks.
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The emergence and spread of multidrug resistant Enterobacterales (MDR-E) are a global public health issue. This problem also concerns urinary tract infections (UTI), which are the second most frequent infections after respiratory infections. The objective of this study was to determine MDR-E frequency and to characterize MDR-E isolates from patients with community-acquired UTIs in Djibouti, Republic of Djibouti.

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Article Synopsis
  • * Findings revealed that 1.61% of clinical isolates and 5.26% of fecal samples were CP-GNB, with higher rates among inpatients (2.98%) and in intensive care units.
  • * The research identified Klebsiella pneumoniae and Acinetobacter baumannii as the most common CP-GNB, with blaOXA-48 being the most prevalent resistance gene, indicating a need for preventive measures to curb the spread of these resistant bacteria. *
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The FilmArray Blood Culture Identification 2 panel (BCID2; bioMérieux) is a fully automated PCR-based assay for identifying bacteria, fungi, and bacterial resistance markers in positive blood cultures (BC) in about 1 h. In this multicenter study, we evaluated the performance of the BCID2 panel for pathogen detection in positive BC. Conventional culture and BCID2 were performed in parallel at four tertiary-care hospitals.

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(1) Background: Terrestrial mammals in protected areas have been identified as a potential source of antimicrobial-resistant bacteria. Studies on antimicrobial resistance in gorillas have already been conducted. Thus, this study aimed to describe the phylogroups, pathotypes and prevalence of antimicrobial resistance of isolated from western lowland gorilla's faeces living in MDNP.

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