Theoretical analysis of photosensitization of DNA by thionine.

Context: In this work, we are the first to perform a theoretical analysis of photoinduced charge transfer in the intercalation complex of thionine (TH) with double-stranded DNA, which was observed in experiments. Efficient DNA binding and long-wave absorption maximum make TH an attractive photosensitizer. d(CpG) tetranucleotide was used as a minimal model DNA fragment.

The vibronic absorption spectrum and electronic properties of Azure B in aqueous solution: TD-DFT/DFT study.

The vibronic absorption spectrum of Azure B (AB) in an aqueous solution is calculated using the time-dependent density functional theory (TD-DFT). The results of calculations are analyzed using all hybrid functionals supported by Gaussian16, the 6-31++G(d,p) basis set, and the IEFPCM and SMD solvent models. The solvent model IEFPCM gave significantly underestimated values of λ in comparison with the experiment.

The vibronic absorption spectra and electronic states of acridine orange in aqueous solution.

The time-dependent density functional theory (TD-DFT) was used to obtain vibronic absorption spectra of acridine orange dye (AO) in an aqueous solution that were in good agreement with the experiment. The protonated and neutral forms of the dye have been investigated. The results of calculations using various functionals and basis sets have been analyzed.