Publications by authors named "Suchandrima Banerjee"

The HEALthy Brain and Child Development (HBCD) Study, a multi-site prospective longitudinal cohort study, will examine human brain, cognitive, behavioral, social, and emotional development beginning prenatally and planned through early childhood. The acquisition of multimodal magnetic resonance-based brain development data is central to the study's core protocol. However, application of Magnetic Resonance Imaging (MRI) methods in this population is complicated by technical challenges and difficulties of imaging in early life.

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Background: Perfusion imaging is one of the methods used to grade glial neoplasms, and in this study we evaluated the role of ASL perfusion in grading brain glioma.

Purpose: The aim is to evaluate the role of arterialized cerebral blood volume (aCBV) of multi-delay ASL perfusion for grading glial neoplasm.

Materials And Methods: This study is a prospective observational study of 56 patients with glial neoplasms of the brain who underwent surgery, and only cases with positive diagnosis of glioma are included to evaluate the novel diagnostic parameter.

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Article Synopsis
  • REACT is a method that combines fMRI data with information about neurotransmitter distribution in the brain, enhancing the analysis of functional connectivity by providing biological context.* -
  • The study applied REACT to simultaneous ASL (Arterial Spin Labeling) and BOLD (Blood Oxygen Level Dependent) imaging methods in 29 healthy subjects, examining the functional connectivity related to six molecular systems.* -
  • Results indicated that ASL provides similar functional circuit information as BOLD, showing moderate overlap between their connectivity maps, and both methods offer complementary insights into brain function.*
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Cancer care increasingly relies on imaging for patient management. The two most common cross-sectional imaging modalities in oncology are computed tomography (CT) and magnetic resonance imaging (MRI), which provide high-resolution anatomic and physiological imaging. Herewith is a summary of recent applications of rapidly advancing artificial intelligence (AI) in CT and MRI oncological imaging that addresses the benefits and challenges of the resultant opportunities with examples.

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Background: Although susceptibility-weighted imaging (SWI) is the gold standard for visualizing cerebral microbleeds (CMBs) in the brain, the required phase data are not always available clinically. Having a postprocessing tool for generating SWI contrast from T2*-weighted magnitude images is therefore advantageous.

Purpose: To create synthetic SWI images from clinical T2*-weighted magnitude images using deep learning and evaluate the resulting images in terms of similarity to conventional SWI images and ability to detect radiation-associated CMBs.

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Muscle weakness is common in many neurological, neuromuscular, and musculoskeletal conditions. Muscle size only partially explains muscle strength as adaptions within the nervous system also contribute to strength. Brain-based biomarkers of neuromuscular function could provide diagnostic, prognostic, and predictive value in treating these disorders.

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The purpose of the present pilot study was to estimate T1 and T2 metric values derived simultaneously from a new, rapid Magnetic Resonance Fingerprinting (MRF) technique, as well as to assess their ability to characterize-brain metastases (BM) and normal-appearing brain tissues. Fourteen patients with BM underwent MRI, including prototype MRF, on a 3T scanner. In total, 108 measurements were analyzed: 42 from solid parts of BM's (21 each on T1 and T2 maps) and 66 from normal-appearing brain tissue (11 ROIs each on T1 and T2 maps for gray matter [GM], white matter [WM], and cerebrospinal fluid [CSF]).

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The present exploratory study investigates the performance of a new, rapid, synthetic MRI method for diagnostic image quality assessment and measurement of relaxometry metric values in head and neck (HN) tumors and normal-appearing masseter muscle. The multi-dynamic multi-echo (MDME) sequence was used for data acquisition, followed by synthetic image reconstruction on a 3T MRI scanner for 14 patients (3 untreated and 11 treated). The MDME enables absolute quantification of physical tissue properties, including T1 and T2, with a shorter scan time than the current state-of-the-art methods used for relaxation measurements.

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In multi-echo fMRI (ME-fMRI), two metrics have been widely used to measure the performance of various acquisition and analysis approaches. These are temporal SNR (tSNR) and differential contrast-to-noise ratio (dCNR). A key step in ME-fMRI is the weighted combination of the data from multiple echoes, and prior work has examined the dependence of tSNR and dCNR on the choice of weights.

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The present preliminary study aims to characterize brain metastases (BM) using T1 and T2 maps generated from newer, rapid, synthetic MRI (MAGnetic resonance image Compilation; MAGiC) in a clinical setting. We acquired synthetic MRI data from 11 BM patients on a 3T scanner. A multiple-dynamic multiple-echo (MDME) sequence was used for data acquisition and synthetic image reconstruction, including post-processing.

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Purpose: To develop a rigid real-time prospective motion-corrected multiparametric mapping technique and to test the performance of quantitative estimates.

Methods: Motion tracking and correction were performed by integrating single-shot spiral navigators into a multiparametric imaging technique, three-dimensional quantification using an interleaved Look-Locker acquisition sequence with a T2 preparation pulse (3D-QALAS). The spiral navigator was optimized, and quantitative measurements were validated using a standard system phantom.

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Article Synopsis
  • QSM is a promising biomarker for diseases due to its ability to measure tissue susceptibility linked to iron, myelin, and hemorrhage from MRI phase signals, but it faces challenges like weak tissue signals and complicated data processing.
  • The study aimed to analyze how different background field removal and dipole inversion algorithms impact noise, image uniformity, and structural contrast in quantifying cerebral microbleeds (CMBs) using both 3T and 7T MRI scanners.
  • Results showed that 7T MRI produced lower noise and better contrast for white matter and CMBs compared to 3T, with specific algorithms (QSIP and VSHARP + iLSQR) performing best in aligning with ground truth QSM references, offering
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Blood oxygen level-dependent (BOLD) functional MRI (fMRI) is commonly used to measure cerebrovascular reactivity (CVR), which can convey insightful information about neurovascular health. Breath-holding (BH) has been shown to be a practical vasodilatory stimulus for measuring CVR in clinical settings. The conventional BOLD fMRI approach has some limitations, however, such as susceptibility-induced signal dropout at air tissue interfaces and low BOLD sensitivity especially in areas of low .

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Purpose: Simultaneous multi-slice acquisitions are essential for modern neuroimaging research, enabling high temporal resolution functional and high-resolution q-space sampling diffusion acquisitions. Recently, deep learning reconstruction techniques have been introduced for unaliasing these accelerated acquisitions, and robust artificial-neural-networks for k-space interpolation (RAKI) have shown promising capabilities. This study systematically examines the impacts of hyperparameter selections for RAKI networks, and introduces a novel technique for training data generation which is analogous to the split-slice formalism used in slice-GRAPPA.

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  • This study assesses a new imaging technique (MBME) against a traditional one (MBSE) in fMRI to see if it performs better in detecting brain activity during tasks.
  • MBME utilizes both multiband and multiecho techniques to enhance image quality, and testing was done on 29 healthy volunteers during a visual task.
  • Results show that MBME had greater activation volume and sensitivity, indicating it may be a superior method for capturing brain activity compared to MBSE.
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Article Synopsis
  • Recent advancements in functional MRI, specifically multiband (MB) and multi-echo (ME) imaging, lead to improved temporal and spatial resolution by acquiring multiple slices and echoes simultaneously.
  • In a study involving 29 subjects, resting state fMRI data were collected using both MBME (with multiple echoes) and MB (with one echo) sequences, allowing for comparative analysis of connectivity metrics.
  • Results showed that MBME enhanced resting state functional connectivity (RSFC) and reproducibility across various analysis methods (including seed-based and data-driven approaches), suggesting that MBME is a more effective technique for resting state fMRI research.
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Acquisition parameter selection is currently performed empirically for many quantitative MRI (qMRI) acquisitions. Tuning parameters for different scan times, tissues, and resolutions requires some amount of trial and error. There is an opportunity to quantitatively optimize these acquisition parameters in order to minimize variability of quantitative maps and post-processing techniques such as synthetic image generation.

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Although combined spin- and gradient-echo (SAGE) dynamic susceptibility-contrast (DSC) MRI can provide perfusion quantification that is sensitive to both macrovessels and microvessels while correcting for T -shortening effects, spatial coverage is often limited in order to maintain a high temporal resolution for DSC quantification. In this work, we combined a SAGE echo-planar imaging (EPI) sequence with simultaneous multi-slice (SMS) excitation and blipped controlled aliasing in parallel imaging (blipped CAIPI) at 3 T to achieve both high temporal resolution and whole brain coverage. Two protocols using this sequence with multi-band (MB) acceleration factors of 2 and 3 were evaluated in 20 patients with treated gliomas to determine the optimal scan parameters for clinical use.

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Article Synopsis
  • Simultaneous multi-slice (SMS) imaging accelerates MRI data acquisition by exciting multiple slices with a single pulse, necessitating careful selection of reconstruction parameters to maintain image quality.
  • A study was conducted using two phased-array head coils to compare SMS images reconstructed with various parameters, focusing on calibration data and the impact of coil design on image fidelity.
  • Results indicated that the smaller 32-channel coil outperformed the 48-channel coil, with optimal image quality achieved using larger calibration regions and smaller kernel sizes, alongside regularization during the kernel fitting process.
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Multi-echo saturation recovery sequence can provide redundant information to synthesize multi-contrast magnetic resonance imaging. Traditional synthesis methods, such as GE's MAGiC platform, employ a model-fitting approach to generate parameter-weighted contrasts. However, models' over-simplification, as well as imperfections in the acquisition, can lead to undesirable reconstruction artifacts, especially in T2-FLAIR contrast.

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Purpose: Reduced field-of-view (rFOV) diffusion-weighted imaging (DWI) using 2D echo-planar radiofrequency (2DRF) excitation has been widely and successfully applied in clinical settings. The purpose of this work is to further improve its clinical utility by overcoming slice coverage limitations without any scan time penalty while providing robust fat suppression.

Theory And Methods: During multislice imaging with 2DRF pulses, periodic sidelobes in the slice direction cause partial saturation, limiting the slice coverage.

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Purpose: To develop a technique for high-resolution diffusion-weighted imaging (DWI) and to compare it with standard DWI methods.

Methods: Multiple in-plane bands of magnetization were simultaneously excited by identically phase modulating each subpulse of a two-dimensional (2D) RF pulse. Several excitations with the same multiband pattern progressively shifted in the phase-encode direction were used to cover the prescribed field of view (FOV).

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Article Synopsis
  • Recent advancements in multiband echo planar imaging (MB EPI) have improved MR diffusion weighted imaging (DWI), allowing for comprehensive brain scans in a reasonable time span, though challenges remain at 7 T due to field inhomogeneities.
  • This study aimed to evaluate the effectiveness of MB EPI at 7 T for capturing 90-directional multi-shell DWI in glioma patients, including a comparison of signal-to-noise ratio (SNR) between 3 T and 7 T and the use of techniques to mitigate distortion.
  • Findings suggest that MB EPI at 7 T offers comparable SNR to 3 T, producing clinically acceptable data quality and revealing unique insights into tumor characteristics through NODDI maps that
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Purpose: To compare the diagnostic value of conventional, bilateral diffusion-weighted imaging (DWI) and high-resolution targeted DWI of known breast lesions.

Materials And Methods: Twenty-one consecutive patients with known breast cancer or suspicious breast lesions were scanned with the conventional bilateral DWI technique, a high-resolution, reduced field of view (rFOV) DWI technique, and dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) (3.0 T).

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  • The study aimed to evaluate the repeatability of the apparent diffusion coefficient (ADC) measured by reduced field-of-view diffusion-weighted imaging (rFOV DWI) in thyroid glands.
  • Ten healthy volunteers underwent MRI scans over three sessions, comparing rFOV DWI to conventional full field-of-view (fFOV DWI) to analyze image quality and ADC values.
  • Results showed that rFOV DWI provided better image quality and lower ADC values, with consistent results across different sessions, indicating it may be a more reliable imaging method for this purpose.
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