Roseomonas deserti sp. nov., isolated from crude oil contaminated desert sand.

Two dark pink pigmented bacterial strains (M3 and M11) were isolated from crude oil contaminated desert sand from Kuwait. Both strains were Gram-stain-negative and small-rod to oval-shaped bacteria. Strains M3 and M11 grew at 13-42 °C (optimum, 30-35 °C) and pH 6.

Psedoduganella eburnea sp. nov., isolated from lagoon sediments.

Strain 10R5-21 was isolated from lagoon sediments. Cells of strain 10R5-21 were Gram-reaction-negative, rod-shaped and motile by means of polar flagella. The strain was obligately aerobic and positive for catalase and oxidase activity.

Characterisation of a newly isolated member of a candidatus lineage, Marispirochaeta aestuarii gen. nov., sp. nov.

Metagenome analysis of coastal marine habitats of Gujarat, India indicated the presence of twelve novel putative lineages of spirochaetes. Out of which a strain designated JC444 representing a novel putative lineage seven was isolated and characterized based on a polyphasic taxonomic approach. Strain JC444 was helical, Gram-stain-negative, obligate anaerobe, catalase and oxidase negative.

Description of Oceanispirochaeta sediminicola gen. nov., sp. nov., an obligately anaerobic bacterium isolated from coastal marine sediments, and reclassification of Spirochaeta litoralis as Oceanispirochaeta litoralis comb. nov.

An obligately anaerobic spirochaete (strain SY2T) was isolated from coastal marine sediments of Tongyeong-Si, South Korea. Strain SY2T was helical-shaped and Gram-stain-negative. Strain SY2T was able to grow at 10-40 °C (optima, 25-30 °C), pH 6.

Aneurinibacillus sediminis sp. nov., isolated from lagoon sediments.

Two bacterial strains (1-10M-8-7-50T and 1M) were isolated from lagoon sediments. The strains were obligately aerobic, Gram-stain-positive, spore-forming, rod-shaped and motile. Both strains were able to grow at 25-60 ˚C (optimum 40-42 ˚C), at pH 6.

Roseomonas suffusca sp. nov., isolated from lagoon sediments.

Three light-brown-coloured, Gram-stain-negative, small rod- to oval-shaped, motile bacteria were isolated from lagoon sediments collected from North Carolina, USA. The strains (S1T, AS3 and AS6) grew aerobically at 13-42 °C (optimum, 30-35 °C) and pH 6.5-9.

Skermanella mucosa sp. nov., isolated from crude oil contaminated soil.

A novel Gram-stain negative, small rod-shaped bacterium (strain 8-14-6) was isolated from hydrocarbon contaminated desert soil collected from Kuwait. Strain 8-14-6 grew at 5-37 °C, pH 6.0-8.

Halodesulfovibrio spirochaetisodalis gen. nov. sp. nov. and reclassification of four Desulfovibrio spp.

An antibiotic-producing, obligate anaerobic, Gram-stain-negative, catalase- and oxidase-negative strain (JC271T) was isolated from a marine habitat and identified, based on 16S rRNA gene sequence analysis, as a novel member of the family Desulfovibrionaceae. The closest phylogenetic relatives of strain JC271T were found to be Desulfovibrio marinisediminis C/L2T (99.2 %), Desulfovibrio acrylicus W218T (98.

Description of 'Candidatus Marispirochaeta associata' and reclassification of Spirochaeta bajacaliforniensis, Spirochaeta smaragdinae and Spirochaeta sinaica to a new genus Sediminispirochaeta gen. nov. as Sediminispirochaeta bajacaliforniensis comb. nov., Sediminispirochaeta smaragdinae comb. nov. and Sediminispirochaeta sinaica comb. nov.

Strain JC231 was isolated from a coastal saline habitat of Gujarat and was identified based on 16S rRNA gene sequence analysis as a member belonging to the genus Spirochaeta and showed highest sequence similarity (<91 %) with Spirochaeta bajacaliforniensis DSM 16054T and other members of the family Spirochaetaceae. Intensive attempts to culture strain JC231 in pure culture have failed and were associated with only one species of a Desulfovibrio. However, presence of fosmidomycin inhibited the growth of Desulfovibrio sp.

Microvirgula curvata sp. nov., isolated from hydrocarbon-contaminated soil, and emended description of the genus Microvirgula.

A novel Gram-stain-negative, small curved-rod-shaped, motile strain, designated L6T, was isolated from hydrocarbon-contaminated soils collected from Kuwait. Strain L6T was able to grow at 10-40 °C (optimum, 27-32 °C), pH 6.1-8.

Skermanella rosea sp. nov., isolated from hydrocarbon-contaminated desert sands.

A novel Gram-stain-negative, small rod-shaped, motile strain, designated M1T, was isolated from hydrocarbon-contaminated desert sands collected from Kuwait. M1T grew at 12-45 °C, pH 6.1-8.

Shinella curvata sp. nov., isolated from hydrocarbon-contaminated desert sands.

The taxonomic position of a novel bacterial strain, designated C3T, isolated from hydrocarbon-contaminated desert sands was determined. Strain C3T was a Gram-stain-negative, rod- to curved-rod-shaped and non-motile bacterium. It was able to grow at 4-45 °C (optima, 28- 35 °C) and at pH 6.

Roseomonas rubra sp. nov., isolated from lagoon sediments.

A novel Gram-stain-negative, coccus to oval-shaped, non-motile bacterium, designated strain S5T, was isolated from lagoon sediments collected from North Carolina, USA. Strain S5T was able to grow at 12-45 °C (optima, 30-37 °C) and at pH 6.3-9.

Rhodobacter sediminis sp. nov., isolated from lagoon sediments.

Two Gram-stain-negative, rod-shaped phototrophic bacteria (designated strains N1T and C7) were isolated from lagoon sediments. Both strains were positive for catalase and oxidase activity. Casein, starch, urea and Tween 20 were hydrolysed by both strains while chitin, gelatin and Tween 80 were not.

Description of Comamonas sediminis sp. nov., isolated from lagoon sediments.

Strain S3 was isolated from lagoon sediments, and appeared as transparent colonies on agar plates, with cells staining Gram-negative. Catalase and oxidase were positive. S3 hydrolyzed starch, casein and tween-20, while urea, chitin, gelatin and tween-80 were not hydrolysed.

Bacillus oleivorans sp. nov., a diesel oil-degrading and solvent-tolerant bacterium.

Two Gram-stain-positive, diesel oil-degrading, solvent-tolerant, aerobic, endospore-forming, rod-shaped bacteria were isolated from a contaminated laboratory plate. Based on 16S rRNA gene sequence analysis, strains JC228(T) and JC279 were identified as belonging to the genus Bacillus within the family Bacillaceae of the phylum Firmicutes and were found to be most closely related to Bacillus carboniphilus JCM 9731(T) (98.1% 16S rRNA gene sequence similarity) and shared <96.

Spirochaeta lutea sp. nov., isolated from marine habitats and emended description of the genus Spirochaeta.

Metagenome analysis of forty samples indicated a rich diversity of free living spirochaetes among Indian habitats. Only 2-3% of the total bacterial diversity was represented by spirochaetes with five distinct phylogenetic OTUs. A strain (JC230(T)) was brought to cultivation and its 16S rRNA gene sequence showed highest sequence similarity with that of Spirochaeta asiatica Z-7591(T) (90.

Hymenobacter roseus sp. nov., isolated from sand.

Strain JC245(T) was isolated from a sand sample, and appeared as dark pink colonies on agar plates with cells staining Gram-negative. Catalase and oxidase activities were positive. Casein was hydrolysed while chitin, gelatin and starch were not.

Sphingopyxis contaminans sp. nov., isolated from a contaminated Petri dish.

Strain JC216(T) was isolated from a contaminated Petri dish. Colonies were of pale yellow colour and cells were Gram-stain-negative, oxidase-positive and catalase-positive. Chitin, starch and gelatin were not hydrolysed.

Bacillus luteus sp. nov., isolated from soil.

Two bacterial strains (JC167T and JC168) were isolated from a soil sample collected from Mandpam, Tamilnadu, India. Colonies of both strains were orange and cells Gram-stain-positive. Cells were small rods, and formed terminal endospores of ellipsoidal to oval shape.

Pontibacter ruber sp. nov. and Pontibacter deserti sp. nov., isolated from the desert.

Two strains of bacteria, JC213(T) and JC215(T), were isolated from desert soil. Colonies were red to pink and cells Gram-stain-negative. Both strains were oxidase- and catalase-positive and hydrolysed casein.

Salinimicrobium sediminis sp. nov., isolated from a deep-sea sediment.

Strain JC207(T) was isolated from a deep (265 m) sea sediment, and appeared as dark yellow colonies on agar plates with cells staining Gram-negative. Catalase, oxidase and caseinase were positive, while chitinase, gelatinase and amylase were negative. Major (>5 %) fatty acids were iso-C15 : 0, anteiso-C15:0, iso-C17 : 1ω9c, iso-C16 : 0, iso-C15 : 0 3-OH, iso-C17 : 0 3-OH, iso-C14 : 0 and iso-C15:1G.

Erythrobacter odishensis sp. nov. and Pontibacter odishensis sp. nov. isolated from dry soil of a solar saltern.

Two bacterial strains (JC130(T) and JA747(T)) were isolated from dry soils of a solar saltern. Phylogenetic analysis showed that strain JA747(T) clustered with species of the genus Erythrobacter belonging to the family Erythrobacteraceae of the class Alphaproteobacteria in the phylum Proteobacteria, while strain JC130(T) clustered with species of the genus Pontibacter belonging to the family Cytophagaceae of the phylum Bacteroidetes. Based on 16S rRNA gene sequence analysis, strain JA747(T) had highest similarity with Erythrobacter gangjinensis K7-2(T) (96.

Flavobacterium aquaticum sp. nov., isolated from a water sample of a rice field.

Strain JC164(T) was isolated from a water sample from a rice field at Jamdih, Mau, Uttar Pradesh, India. Colonies of strain JC164(T) were brown-yellow and cells were Gram-stain-negative. Catalase, oxidase and amylase were present.