Expanding the complex: phylogenomic insights, proposal of sp. nov. and reclassification of two species.

A novel species was isolated as a contaminant in viral transport media at the District of Columbia Department of Forensic Sciences Public Health Laboratory. Phylogenomic and biochemical analyses of the isolate determined that it represented a novel species within . Related strains in public genome databases suggested that this novel species is associated with clinically acquired infections, similar to closely related .

Retention time and organic loading rate as anaerobic co-digestion key-factors for better digestate valorization practices: C and N dynamics in soils.

The growing use of anaerobic co-digestion (AcoD) in processing organic waste has led to a significant digestate production. To effectively recycle digestate back into soils, it is crucial to understand how operational variables in the AcoD process influence the conversion of organic matter (OM). To address this, a combination of biochemical fractionation and various soil incubation tests were employed to assess the stability of OM in digestates generated from anaerobic continuous reactors fed with a food waste-hay mixture and operating at different hydraulic retention times (HRT) and organic loading rates (OLR).

Modelling of anaerobic digestion of microalgae biomass: Effect of overloading perturbation.

Anaerobic digestion (AD) of microalgae is an intriguing approach for bioenergy production. The scaling-up of AD presents a significant challenge due to the systematic efficiency losses related to process instabilities. To gain a comprehensive understanding of AD behavior, this study assessed a modified version of the anaerobic digestion model No1 (ADM1) + Contois kinetics to represent microalgae AD impacted by overloading.

Aqueous phase recycling: impact on microalgal lipid accumulation and biomass quality.

The potential success of microalgal biofuels greatly depends on the sustainability of the chosen pathway to produce them. Hydrothermal liquefaction (HTL) is a promising route to convert wet algal biomass into biocrude. Recycling the resulting HTL aqueous phase (AP) aims not only to recover nutrients from this effluent but also to use it as a substrate to close the photosynthetic loop and produce algal biomass again and process this biomass again into new biocrude.

Rapid characterization of sulfur and phosphorus in organic waste by near infrared spectroscopy.

Near-infrared spectroscopy (NIRS) has recently emerged as a valuable tool for monitoring organic waste utilized in anaerobic digestion processes. Over the past decade, NIRS has significantly improved the characterization of organic waste by enabling the prediction of several crucial parameters such as biochemical methane potential, carbohydrate, lipid and nitrogen contents, Chemical Oxygen Demand, and kinetic parameters. This study investigates the application of NIRS for predicting the levels of Sulfur (S) and Phosphorus (P) within organic waste materials.

Determination of the optimal feed recipe of anaerobic digesters using a mathematical model and a genetic algorithm.

Recently, numerous experimental studies have been undertaken to understand the interactions between different feedstocks in anaerobic digestion. They have unveiled the potential of blending substrates in the process. Nevertheless, these experiments are time-intensive, prompting the exploration of various optimization approaches.

Branched-chain amino acid biosynthesis in fungi.

Branched-chain amino acids (BCAAs)-isoleucine, leucine, and valine-are synthesized by fungi. These amino acids are important components of proteins and secondary metabolites. The biochemical pathway for BCAA biosynthesis is well-characterized in the yeast Saccharomyces cerevisiae.

The role of pulse timing in cardiac defibrillation.

Life-threatening cardiac arrhythmias require immediate defibrillation. For state-of-the-art shock treatments, a high field strength is required to achieve a sufficient success rate for terminating the complex spiral wave (rotor) dynamics underlying cardiac fibrillation. However, such high energy shocks have many adverse side effects due to the large electric currents applied.

SoilFract: A mechanistic model accounting for the fate of exogenous organic matter in soil carbon and nitrogen cycles.

As its use in agriculture grows, the fate of digestate in soil raises concerns on many different levels. In particular, the degradability of its organic matter when spread on soil is still an ongoing topic. In an effort to better understand the processes and dynamics of digestate soil incubation, C and N mineralization kinetics obtained in 358 days long laboratory incubations during decomposition of digestates were simulated using a dynamic model.

Microalgae adaptation as a strategy to recycle the aqueous phase from hydrothermal liquefaction.

Hydrothermal liquefaction (HTL) produces bio-crude oil from wet algae along with an aqueous phase (AP). This effluent contains minerals that can be reused for cultivating new microalgae but whose utility remains limited due to the presence of inhibitors. Reduced photosynthetic performance, growth, and null lipid accumulation were observed in wild-type Chlorella vulgaris NIES 227 cultivated in AP (1/200).

Dark fermentation and microalgae cultivation coupled systems: Outlook and challenges.

The implementation of a sustainable bio-based economy is considered a top priority today. There is no doubt about the necessity to produce renewable bioenergy and bio-sourced chemicals to replace fossil-derived compounds. Under this scenario, strong efforts have been devoted to efficiently use organic waste as feedstock for biohydrogen production via dark fermentation.

The endocast of the insular and extinct Sylviornis neocaledoniae (Aves, Galliformes), reveals insights into its sensory specializations and its twilight ecology.

Sylviornis neocaledoniae (Galliformes, Sylviornithidae), a recently extinct bird of New-Caledonia (Galliformes, Sylviornithidae) is the largest galliform that ever lived and one of the most enigmatic birds in the world. Herein, for the first time, we analyze its neuroanatomy that sheds light on its lifestyle, its brain shape and patterns being correlated to neurological functions. Using morphometric methods, we quantified the endocranial morphology of S.

Fast and robust NIRS-based characterization of raw organic waste: Using non-linear methods to handle water effects.

Fast characterization of organic waste using near infrared spectroscopy (NIRS) has been successfully developed in the last decade. However, up to now, an on-site use of this technology has been hindered by necessary sample preparation steps (freeze-drying and grinding) to avoid important water effects on NIRS. Recent research studies have shown that these effects are highly non-linear and relate both to the biochemical and physical properties of samples.

Proteomics unveil a central role for peroxisomes in butyrate assimilation of the heterotrophic Chlorophyte alga sp.

Volatile fatty acids found in effluents of the dark fermentation of biowastes can be used for mixotrophic growth of microalgae, improving productivity and reducing the cost of the feedstock. Microalgae can use the acetate in the effluents very well, but butyrate is poorly assimilated and can inhibit growth above 1 gC.L.

Agronomic characterization of anaerobic digestates with near-infrared spectroscopy.

Anaerobic digestion is an increasingly widespread process for organic waste treatment and renewable energy production due to the methane content of the biogas. This biological process also produces a digestate (i.e.

Enhanced organic degradation and biogas production of domestic wastewater at psychrophilic temperature through submerged granular anaerobic membrane bioreactor for energy-positive treatment.

This study deals with the conversion of organic matter into methane at ambient temperature, during anaerobic digestion of domestic wastewater combined with a submerged ultrafiltration membrane with no gas-sparging. A one-stage submerged granular anaerobic membrane bioreactor (G-AnMBR) and a control anaerobic digester (UASB type) were operated during four months, after 500 days of biomass acclimatization to psychrophilic and low loading rate conditions. Membrane barrier led to the retention of biomass, suspended solids and dissolved and colloidal organic matter which greatly enhanced total COD (tCOD) removal (92.

Screening and Application of Ligninolytic Microbial Consortia to Enhance Aerobic Degradation of Solid Digestate.

Recirculation of solid digestate through digesters has been demonstrated to be a potential simple strategy to increase continuous stirred-tank reactor biogas plant efficiency. This study extended this earlier work and investigated solid digestate post-treatment using liquid isolated ligninolytic aerobic consortia in order to increase methane recovery during the recirculation. Based on sampling in several natural environments, an enrichment and selection method was implemented using a Lab-scale Automated and Multiplexed (an)Aerobic Chemostat system to generate ligninolytic aerobic consortia.

A twig-like insect stuck in the Permian mud indicates early origin of an ecological strategy in Hexapoda evolution.

Full body impressions and resting traces of Hexapoda can be of extreme importance because they bring crucial information on behavior and locomotion of the trace makers, and help to better define trophic relationships with other organisms (predators or preys). However, these ichnofossils are much rarer than trackways, especially for winged insects. Here we describe a new full-body impression of a winged insect from the Middle Permian of Gonfaron (Var, France) whose preservation is exceptional.

Mixotrophic Growth of on Acetate and Butyrate: Interplay Between Substrate, C:N Ratio and pH.

Microalgae can be cultivated on waste dark fermentation effluents containing volatile fatty acids (VFA) such as acetate or butyrate. These VFA can however inhibit microalgae growth at concentrations above 0.5-1 g.

Duplication and Functional Divergence of Branched-Chain Amino Acid Biosynthesis Genes in Aspergillus nidulans.

Fungi, bacteria, and plants, but not animals, synthesize the branched-chain amino acids: leucine, isoleucine, and valine. While branched-chain amino acid (BCAA) biosynthesis has been well characterized in the yeast Saccharomyces cerevisiae, it is incompletely understood in filamentous fungi. The three BCAAs share several early biosynthesis steps before divergence into specific pathways.

On-site substrate characterization in the anaerobic digestion context: A dataset of near infrared spectra acquired with four different optical systems on freeze-dried and ground organic waste.

The near infrared spectra of thirty-three freeze-dried and ground organic waste samples of various biochemical composition were collected on four different optical systems, including a laboratory spectrometer, a transportable spectrometer with two measurement configurations (an immersed probe, and a polarized light system) and a micro-spectrometer. The provided data contains one file per spectroscopic system including the reflectance or absorbance spectra with the corresponding sample name and wavelengths. A reference data file containing carbohydrates, lipid and nitrogen content, biochemical methane potential (BMP) and chemical oxygen demand (COD) for each sample is also provided.

Insights into bioflocculation of filamentous cyanobacteria, microalgae and their mixture for a low-cost biomass harvesting system.

Cyanobacteria and microalgae are considered as interesting feedstocks for either the production of high value bio-based compounds and biofuels or wastewater treatment. Nevertheless, the high costs of production, mainly due to the harvesting process, hamper a wide commercialization of industrial cyanobacteria and microalgae based products. Recent studies have found in autoflocculation and bioflocculation promising spontaneous processes for a low-cost and environmentally sustainable cyanobacteria and microalgae biomass harvesting process.

Relating Near-Infrared Light Path-Length Modifications to the Water Content of Scattering Media in Near-Infrared Spectroscopy: Toward a New Bouguer-Beer-Lambert Law.

In near-infrared spectroscopy (NIRS), the linear relationship between absorbance and an absorbing compound concentration has been strictly defined by the Bouguer-Beer-Lambert law only for the case of transmission measurements of nonscattering media. However, various quantitative calibrations have been successfully built both on reflectance measurements and for scattering media. Although the lack of linearity for scattering media has been observed experimentally, the sound multivariate statistics and signal processing involved in chemometrics have allowed us to overcome this problem in most cases.