Publications by authors named "Stephen A Kelly"

Antibiotic resistance is one of the most serious health problems today and is expected to worsen in the coming decades. It has been suggested that antibiotic administration routes that bypass the human gut could potentially tackle this problem. In this work, an antibiotic hydrogel-forming microarray patch (HF-MAP) system, which can be used as an alternative antibiotic delivery technology, has been fabricated.

View Article and Find Full Text PDF
Article Synopsis
  • Large regions of Earth's surface contain ancient salt deposits, home to extreme halophilic microbes, but the ecology of salt structures in places like the Triassic Kilroot Salt Mine has not been thoroughly explored.
  • Researchers identified 89 halophilic archaeal and 55 bacterial isolates from the microbiome of Kilroot Salt Mine, highlighting a bias in traditional culturing methods that limits diversity.
  • Unique formations called speleothems may preserve microbial cells for long periods, suggesting a rich environment for studying gene functions related to survival and the potential for discovering new biocatalysts.
View Article and Find Full Text PDF
Article Synopsis
  • * Researchers isolated a novel bacteriophage (vB_PmiS_PM-CJR) that showed promise in breaking down these biofilms due to its depolymerase activity, which helps in degrading the biofilm structure.
  • * The isolated tail spike protein from the bacteriophage was tested and found to significantly reduce bacterial adherence, indicating its potential as a new treatment strategy for catheter-associated infections.
View Article and Find Full Text PDF

Large regions of Earth's surface are underlain by salt deposits that evaporated from ancient oceans and are populated by extreme halophilic microbes. Some of these halophiles may have been preserved over geological timescales within hypersaline fluid inclusions, but ingresses of water and/or anthropogenic activities can lead to the formation of alternative habitats, including NaCl stalactites or other speleothems. While the microbiology of ancient evaporites has been well studied, the ecology of these recently formed structures is less-well understood.

View Article and Find Full Text PDF
Article Synopsis
  • * The study investigated the effects of oral vs. intravenous antibiotic administration on the rat gut microbiome using amoxicillin and levofloxacin, showing significant dysbiosis in both methods, with more severe impacts noted from amoxicillin.
  • * Gut dysbiosis was temporary, with some recovery of bacterial diversity over 13 days, and intravenous delivery appeared to facilitate a quicker return to normal gut composition compared to oral delivery.
View Article and Find Full Text PDF

The ability to chemically modify ionic liquids (ILs) has led to an expansion in interest in their use in a diversity of applications, not least as antimicrobials and biocides. Relatively little is known about cytotoxicity mechanisms of ILs in comparison to other biocides currently in widespread use, as well as their practical significance for the ecological environment and human health. Using NCTC 2544 and HaCat human keratinocyte cells, this study aimed to characterize cytotoxicity rates and mechanisms of a range of ILs.

View Article and Find Full Text PDF

Microneedle (MN) patches consist of a hydrogel-forming MN array and a drug-containing reservoir. Drug-containing reservoirs documented in the literature include polymeric films and lyophilized wafers. While effective, both reservoir formulations are aqueous based, and so degradation can occur during formulation and drying for drugs inherently unstable in aqueous media.

View Article and Find Full Text PDF

The increasing demand for freshwater and the continued depletion of available resources has led to a deepening global water crisis. Significant water consumption required by many biotechnological processes contributes to both the environmental and economic cost of this problem. Relatively few biocatalytic processes have been developed to utilize the more abundant supply of seawater, with seawater composition and salinity limiting its use with many mesophilic enzymes.

View Article and Find Full Text PDF

Ionic liquids (ILs) have been employed as potentially environmentally friendly replacements for harmful organic solvents, but have also been studied for their use in bioelectrochemical applications, such as in microbial electrochemistry for bioenergy production, or in industrial biocatalysis. For these processes, low microbial toxicity is important and there is a growing need for microbial toxicology studies for novel ILs. In this study, we report initial toxicity data for novel ILs, based on azepanium and 3-methylpiperidinium cations.

View Article and Find Full Text PDF

Transaminases (TAms) are important enzymes for the production of chiral amines for the pharmaceutical and fine chemical industries. Novel TAms for use in these industries have been discovered using a range of approaches, including activity-guided methods and homologous sequence searches from cultured microorganisms to searches using key motifs and metagenomic mining of environmental DNA libraries. This mini-review focuses on the methods used for TAm discovery over the past two decades, analyzing the changing trends in the field and highlighting the advantages and drawbacks of the respective approaches used.

View Article and Find Full Text PDF
Article Synopsis
  • - The Kilroot salt mine in Northern Ireland is the only permanent hypersaline environment in Ireland and has been studied for its unique microbiome for the first time.
  • - Researchers used various culturing techniques and metagenomic approaches to identify 89 halophilic archaea and 55 halophilic or halotolerant bacteria from the mine, many of which are similar to organisms found in other ancient salt deposits.
  • - Some isolates exhibited antimicrobial properties against important bacterial pathogens and previous findings highlight the potential of this microbiome for discovering novel biocatalysts, indicating a significant opportunity for chemical diversity and biodiscovery.
View Article and Find Full Text PDF
Article Synopsis
  • * A healthy gut microbiome plays a crucial role in protecting against AMR, but antibiotic treatments can disrupt this balance, leading to dysbiosis and decreased diversity.
  • * The review discusses new strategies for antibiotic delivery, such as avoiding effects on the gut microbiome and using targeted methods, that could help mitigate AMR issues.
View Article and Find Full Text PDF

Transaminase enzymes (TAms) are becoming increasingly valuable in the chemist's toolbox as a biocatalytic route to chiral amines. Despite high profile successes, the lack of (R)-selective TAms and robustness under harsh industrial conditions continue to prove problematic. Herein, we report the isolation of the first haloarchaeal TAm (BC61-TAm) to be characterised for the purposes of pharmaceutical biocatalysis.

View Article and Find Full Text PDF

Here, we report the draft genome sequence of Salinisphaera sp. strain KSM-18. This obligately halophilic bacterium was isolated from a brine sample obtained from a Triassic salt mine.

View Article and Find Full Text PDF

Chiral amines are valuable building blocks for the pharmaceutical industry, and are increasingly synthesized by transaminase-mediated (TAm) synthesis. Currently available TAms, primarily isolated from the genomes of cultured mesophilic bacteria, often suffer from a number of drawbacks, including poor substrate range and an inability to tolerate the harsh conditions often demanded by industrial processes. These characteristics have, in part, driven the search for novel biocatalysts from both metagenomic sources and extreme environments.

View Article and Find Full Text PDF

Chiral amines are valuable building blocks for the pharmaceutical industry. ω-TAms have emerged as an exciting option for their synthesis, offering a potential "green alternative" to overcome the drawbacks associated with conventional chemical methods. In this review, we explore the application of ω-TAms for pharmaceutical production.

View Article and Find Full Text PDF