Publications by authors named "Stamos Katsigiannis"

This study aims to develop and evaluate an automated system for extracting information related to patient substance use (smoking, alcohol, and drugs) from unstructured clinical text (medical discharge records). The authors propose a four-stage system for the extraction of the substance-use status and related attributes (type, frequency, amount, quit-time, and period). The first stage uses a keyword search technique to detect sentences related to substance use and to exclude unrelated records.

View Article and Find Full Text PDF

Background And Objective: Chest X-ray imaging is a relatively cheap and accessible diagnostic tool that can assist in the diagnosis of various conditions, including pneumonia, tuberculosis, COVID-19, and others. However, the requirement for expert radiologists to view and interpret chest X-ray images can be a bottleneck, especially in remote and deprived areas. Recent advances in machine learning have made possible the automated diagnosis of chest X-ray scans.

View Article and Find Full Text PDF

The global COVID-19 pandemic that started in 2019 and created major disruptions around the world demonstrated the imperative need for quick, inexpensive, accessible and reliable diagnostic methods that would allow the detection of infected individuals with minimal resources. Radiography, and more specifically, chest radiography, is a relatively inexpensive medical imaging modality that can potentially offer a solution for the diagnosis of COVID-19 cases. In this work, we examined eleven deep convolutional neural network architectures for the task of classifying chest X-ray images as belonging to healthy individuals, individuals with COVID-19 or individuals with viral pneumonia.

View Article and Find Full Text PDF

The detection of activities of daily living (ADL) and the detection of falls is of utmost importance for addressing the issue of serious injuries and death as a consequence of elderly people falling. Wearable sensors can provide a viable solution for monitoring people in danger of falls with minimal external involvement from health or care home workers. In this work, we recorded accelerometer data from 35 healthy individuals performing various ADLs, as well as falls.

View Article and Find Full Text PDF

In this paper, we present DREAMER, a multimodal database consisting of electroencephalogram (EEG) and electrocardiogram (ECG) signals recorded during affect elicitation by means of audio-visual stimuli. Signals from 23 participants were recorded along with the participants self-assessment of their affective state after each stimuli, in terms of valence, arousal, and dominance. All the signals were captured using portable, wearable, wireless, low-cost, and off-the-shelf equipment that has the potential to allow the use of affective computing methods in everyday applications.

View Article and Find Full Text PDF

Complementary DNA (cDNA) microarray is a powerful tool for simultaneously studying the expression level of thousands of genes. Nevertheless, the analysis of microarray images remains an arduous and challenging task due to the poor quality of the images that often suffer from noise, artifacts, and uneven background. In this study, the MIGS-GPU [Microarray Image Gridding and Segmentation on Graphics Processing Unit (GPU)] software for gridding and segmenting microarray images is presented.

View Article and Find Full Text PDF

This work introduces a novel method for the detection and segmentation of protein spots in 2D-gel images. A multi-thresholding approach is utilized for the detection of protein spots, while a custom grow-cult algorithm combined with region growing and morphological operators is used for the segmentation process. The experimental evaluation against four state-of-the-art 2D-gel image segmentation algorithms demonstrates the superiority of the proposed approach and indicates that it constitutes an advantageous and reliable solution for 2D-gel image analysis.

View Article and Find Full Text PDF

Complementary DNA (cDNA) microarray is a well-established tool for simultaneously studying the expression level of thousands of genes. Segmentation of microarray images is one of the main stages in a microarray experiment. However, it remains an arduous and challenging task due to the poor quality of images.

View Article and Find Full Text PDF