Publications by authors named "Soumen Roy"

We describe the histological organisation and mucin content in the digestive tract of the stream catfish Pseudecheneis sulcatus. The aim is to find the modifications of the digestive tract in relation to food resources of its habitat. The oesophageal mucosa consists of stratified squamous epithelium with many mucous-secreting cells.

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  • * The study investigates environmental effects on known gravitational wave events and finds no evidence to support significant impacts, ruling out certain star formation scenarios.
  • * Future observatories like the Einstein Telescope and B-DECIGO are expected to explore the influence of environmental factors, such as accretion disks and boson clouds, on compact binary formations.
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Organophosphates, a widely used group of pesticides, can cause severe toxicity in human beings and other non-target organisms. Liver, being the primary site for xenobiotic metabolism, is extremely vulnerable to xenobiotic-induced toxicity. Considering the numerous vital functions performed by the liver, including xenobiotic detoxification, protecting this organ from the ubiquitous pesticides in our food and environment is essential for maintaining homeostasis.

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  • Current multimessenger searches for binary neutron star (BNS) and neutron star-black hole (NSBH) mergers are advancing with the gravitational wave observatories ALIGO, AdVirgo, and KAGRA during their fourth observing run (O4).
  • To enhance the search, the study utilized simulated binary populations and conducted a mock data challenge (MDC), optimizing the software used for real-time data analysis and alert generation.
  • The paper reports on the low-latency infrastructure performance, with a median alert time of approximately 29.5 seconds for full searches, and emphasizes the importance of early warnings for neutron star mergers with a new trigger system, aiming for responses about 3.1 seconds before mergers occur.
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Aureochromes are unique blue light-responsive light-oxygen-voltage (LOV) photoreceptors cum basic leucine zipper (bZIP) transcription factors (TFs), present exclusively in photosynthetic marine stramenopiles. Considering the availability of the complete genome sequence, this study focuses on aureochromes from Ectocarpus siliculosus. Aureochromes mediate light-regulated developmental responses in these brown photosynthetic algae.

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  • The study investigates compact binary coalescences with at least one component mass between 0.2 and 1.0 solar masses using data from Advanced LIGO and Advanced Virgo detectors over six months in 2019, but they found no significant gravitational wave candidates.
  • The analysis leads to an upper limit on the merger rate of subsolar binaries ranging from 220 to 24,200 Gpc⁻³ yr⁻¹, based on the detected signals’ false alarm rate.
  • The researchers use these limits to set new constraints on two models for subsolar-mass compact objects: primordial black holes (suggesting they make up less than 6% of dark matter) and
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Ample evidence indicates that the gut microbiome is a tumor-extrinsic factor associated with antitumor response to anti-programmed cell death protein-1 (PD-1) therapy, but inconsistencies exist between published microbial signatures associated with clinical outcomes. To resolve this, we evaluated a new melanoma cohort, along with four published datasets. Time-to-event analysis showed that baseline microbiota composition was optimally associated with clinical outcome at approximately 1 year after initiation of treatment.

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The detection and management of diseases become quite complicated when pathogens contain asymptomatic phenotypes amongst their ranks, as evident during the recent COVID-19 pandemic. Spreading of diseases has been studied extensively under the paradigm of susceptible-infected-recovered-deceased (SIRD) dynamics. Various game-theoretic approaches have also addressed disease spread, many of which consider , , , and as strategies rather than as states.

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We search for gravitational-wave signals produced by cosmic strings in the Advanced LIGO and Virgo full O3 dataset. Search results are presented for gravitational waves produced by cosmic string loop features such as cusps, kinks, and, for the first time, kink-kink collisions. A template-based search for short-duration transient signals does not yield a detection.

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Motivation: A rigorous yet general mathematical approach to mutagenesis, especially one capable of delivering systems-level perspectives would be invaluable. Such systems-level understanding of phage resistance is also highly desirable for phage-bacteria interactions and phage therapy research. Independently, the ability to distinguish between two graphs with a set of common or identical nodes and identify the implications thereof, is important in network science.

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  • Gut dysbiosis in patients with cirrhosis and chronic gastrointestinal disorders can negatively impact antitumor immunity in the liver, particularly in cases of cholangiocarcinoma.
  • The study found that conditions like primary sclerosing cholangitis (PSC) and colitis lead to an increase in specific immune cells (PMN-MDSCs) that suppress the body's ability to fight tumors.
  • Neomycin treatment was shown to counteract this immune suppression by blocking the expression of factors that promote these suppressive immune cells, suggesting a potential therapeutic avenue for liver cancer prevention.
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  • On May 21, 2019, Advanced LIGO and Virgo detected a significant gravitational-wave signal known as GW190521, indicating a high probability event with a low chance of false alarms.
  • The signal suggests it resulted from the merger of two black holes, one around 85 solar masses and the other about 66 solar masses, with the primary black hole likely being an intermediate mass black hole.
  • The source of the merger is estimated to be about 5.3 billion light-years away, and the rate of similar black hole mergers is estimated to be about 0.13 mergers per billion cubic parsecs per year.
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Adaptive immune responses are acknowledged to evolve from innate immunity. However, limited information exists regarding whether encounters between innate cells direct the generation of specialized T-cell subsets. We aim to understand how natural killer (NK) cells modulate cell-mediated immunity in humans.

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Allosteric communication is the basis of signaling and information transfer. Collective interactions between amino acid residues, which are spatially distributed in the three dimensional structure of a protein molecule, form the basis of allosteric network. While the construction of residue interaction graphs (RIG) is based on static crystal structures of proteins, it is important to extract information on protein dynamics to understand allostery.

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Phage-bacteria interaction is a classic example of competitive coevolution in nature. Mathematical modeling of such interactions furnishes new insight into the dynamics of phage and bacteria. Besides its intrinsic value, a somewhat underutilized aspect of such insight is that it can provide beneficial inputs toward better experimental design.

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PSMD10, a proteasome assembly chaperone, is a widely known oncoprotein which aspects many hall mark properties of cancer. However, except proteasome assembly chaperon function its role in normal cell function remains unknown. To address this issue, we induced PSMD10 overexpression in HEK293 cells and the resultant large-scale changes in gene expression profile were analyzed.

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We present a high accuracy Monte Carlo simulation study of the uniaxial nematic (N_{U}) to isotropic (I) phase transition of a lattice dispersion model of uniaxial nematics composed of biaxial molecules. The N_{U}-I coexistence curve terminating at the Landau critical point has been determined using the multiple histogram reweighting technique. A close investigation reveals a sharp departure in the nature of the N_{U}-I coexistence curve in the temperature-biaxiality parameter phase diagram in comparison to the earlier theoretical (either mean-field or computer simulation) predictions.

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Bacteriophages are more abundant than any other organism on our planet. The interaction of bacteriophages and bacteria and their coevolution is well known. In this chapter, we describe various aspects of modeling such systems and their dynamics.

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Primary liver tumors and liver metastasis currently represent the leading cause of cancer-related death. Commensal bacteria are important regulators of antitumor immunity, and although the liver is exposed to gut bacteria, their role in antitumor surveillance of liver tumors is poorly understood. We found that altering commensal gut bacteria in mice induced a liver-selective antitumor effect, with an increase of hepatic CXCR6 natural killer T (NKT) cells and heightened interferon-γ production upon antigen stimulation.

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Objective: The soxhlet, cold, and ayurvedic extracts of Linn. were evaluated for antirabies activity.

Materials And Methods: Soxhlet and cold extraction method were used to extract (fruit and seed) extracts, and ayurvedic extraction of was prepared.

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Cisplatin (cis-diamminedichloroplatinum) is widely used as a chemotherapeutic drug for genitourinary, breast, lung and head and neck cancers. Though effective in inducing apoptosis in cancer cells, cisplatin treatment causes severe hearing loss among patients. Steroids have been shown to mitigate cisplatin-induced hearing loss.

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Even in the twenty-first century, rabies remains one of the most dreaded diseases in many parts of the world. An effective chemotherapeutic still remains elusive. The present study was aimed at in vitro evaluation of crude extracts of and for their potential anti-rabies activity based on the principle of immunofluorescence.

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The microbiota is composed of commensal bacteria and other microorganisms that live on the epithelial barriers of the host. The commensal microbiota is important for the health and survival of the organism. Microbiota influences physiological functions from the maintenance of barrier homeostasis locally to the regulation of metabolism, haematopoiesis, inflammation, immunity and other functions systemically.

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