Publications by authors named "Souleymane MBoup"

Background: SARS-CoV-2 has been associated with a higher proportion of asymptomatic infections and lower mortality in sub-Saharan Africa than high-income countries. However, there is currently a lack of data on cellular immune responses to SARS-CoV-2 in people living in Africa compared with people in high-income regions of the world. We aimed to assess geographical variation in peripheral and mucosal immune responses.

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  • Enhancing clinical trial skills in Africa is crucial for improving the continent’s ability to prevent, prepare for, and respond to pandemics.
  • The text highlights the major challenges faced in conducting clinical trials in Africa and shares insights from the CONCVACT project, which focused on COVID-19 vaccine trials.
  • Key takeaways include the need for regional cooperation, building local capacities, and creating standardized procedures for clinical trials.
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  • In Senegal, molecular diagnosis for COVID-19 was effective, but genomic surveillance in the public sector was limited.
  • The study analyzed 8,207 samples from travelers and symptomatic patients between July 2020 and December 2021, identifying a significant number of SARS-CoV-2 variants through whole-genome sequencing.
  • Results showed that 20A and 20B variants circulated in 2020, while Delta variants were predominant in 2021, highlighting the global trend in viral diversity during the pandemic.
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Introduction: Acute febrile illnesses (AFI) in developing tropical and sub-tropical nations are challenging to diagnose due to the numerous causes and non-specific symptoms. The proliferation of rapid diagnostic testing and successful control campaigns against malaria have revealed that non- pathogens still contribute significantly to AFI burden. Thus, a more complete understanding of local trends and potential causes is important for selecting the correct treatment course, which in turn will reduce morbidity and mortality.

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Schistosomiasis treatment entirely relies on a single drug, praziquantel, prompting research into alternative therapeutics. Here we evaluated the efficacy and safety of the antimalarial combination artesunate-mefloquine for the treatment of schistosomiasis in a proof-of-concept, pragmatic, open-label, randomized controlled trial in primary schools of six villages endemic for schistosomiasis in northern Senegal. Children (6-14 years) were eligible if Schistosoma eggs were detected by microscopy in urine and/or stool.

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According to the latest WHO estimates (2015) of the global burden of foodborne diseases, is responsible for one of the most serious foodborne infections and commonly results in severe clinical outcomes. The 2013 French MONALISA prospective cohort identified that women born in Africa has a 3-fold increase in the risk of maternal neonatal listeriosis. One of the largest outbreaks occurred in South Africa in 2017-2018 with over 1,000 cases.

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Chikungunya (CHIKV) is a re-emerging endemic arbovirus in West Africa. Since July 2023, Senegal and Burkina Faso have been experiencing an ongoing outbreak, with over 300 confirmed cases detected so far in the regions of Kédougou and Tambacounda in Senegal, the largest recorded outbreak yet. CHIKV is typically maintained in a sylvatic cycle in Senegal but its evolution and factors contributing to re-emergence are so far unknown in West Africa, leaving a gap in understanding and responding to recurrent epidemics.

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Behavior change communication (BCC) strategies have the potential to improve infant feeding and nutrition outcomes among infants and young children in low- and middle-income countries. More recently, there has been a shift toward the adoption of mHealth interventions-the use of mobile phones to transmit health-related information or direct care-to promote recommended BCC strategies among the caregivers of infants and young children. In Senegal, most infants and young children are not fed according to recommended practices leading to a high prevalence of undernutrition and micronutrient deficiencies.

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West Africa faced the COVID-19 pandemic in early March 2020 and, as of March 31, 2022, had more than 900,000 confirmed cases and more than 12,000 deaths. During this period, SARS-CoV-2 genomes evolved genetically, resulting in the emergence of distinct lineages. This review was conducted to provide the epidemiological profile of COVID-19, the mutational profile of SARS-CoV-2, and the dynamics of its lineages in the 16 west African countries by analyzing data from 33 studies and seven situation reports.

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  • Researchers used whole genome sequencing to study SARS-CoV-2 mutations in urban Senegal during the peak COVID-19 wave from March to April 2021.
  • They sequenced 291 nasopharyngeal samples, revealing 16 distinct genomic lineages, with B.1.1.420 being the most prevalent despite the presence of the Alpha variant.
  • The study identified 1125 SNPs compared to the Wuhan reference genome, with notable diversification showing the emergence of a unique Senegalese strain belonging to the Brazilian Gamma variant lineage.
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Background: The essential components of a vaccine delivery system are well-documented, but robust evidence is lacking on policies and implementation strategies are operationalized to drive catalytic improvements in coverage. To address this gap, we identified success factors that supported improvements in routine immunization coverage in Senegal, especially from 2000 to 2019.

Methods: We identified Senegal as an exemplar in the delivery of childhood vaccines through analysis of DTP1 and DTP3 coverage data.

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Background & Aims: Strategies to implement HBV screening and treatment are critical to achieve HBV elimination but have been inadequately evaluated in sub-Saharan Africa (sSA).

Methods: We assessed the feasibility of screen-and-treat interventions in 3 real-world settings (community, workplace, and hospital) in Senegal. Adult participants were screened using a rapid HBsAg point-of-care test.

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  • Hepatitis B virus (HBV) is often found in resource-limited countries, which struggle with timely diagnosis and treatment due to a lack of technical facilities.
  • The study evaluated the effectiveness of using dried blood spots (DBS) for detecting and quantifying HBsAg in subjects, showing promising results with high sensitivity and specificity in tests.
  • The findings indicate that DBSs are a feasible and effective tool for managing HBV infection, particularly in areas with limited healthcare resources.
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•Omicron variant continues to progress in Senegal with the appearance of new contaminations.•IRESSEF detected the first positive case of the Omicron variant on Friday, December 3, 2021.•Since this date, the number of Omicron variant infections has increased over the weeks.

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  • The study focuses on complex Mycobacterium tuberculosis Lineage 3 (L3) strains, which are prevalent in regions with high tuberculosis rates, analyzing 2682 strains from 38 countries.
  • Researchers used advanced techniques like MIRU-VNTR genotyping and whole-genome sequencing to explore the genetic diversity and population structure of L3 strains across five continents.
  • Findings indicate that L3 strains originated in Southern Asia and later spread to North-East and East Africa, offering insights that could aid in the development of new treatments and vaccines for tuberculosis.
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This study investigated the seroprevalence of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) immunoglobulin G (IgG) during the first pandemic wave in Senegal. The seroprevalence rate of SARS-CoV-2 IgG was assessed in 10 cities in Senegal by testing plasma from volunteers attending healthcare clinics for reasons unrelated to coronavirus disease 2019 (=3231) between June and October 2020. The overall positivity rate was 20.

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Objectives: Cisgender gay, bisexual, and other men who have sex with men and transgender women experience HIV incidence disparities in Senegal. These analyses determined how depression and different stigma mechanisms related to sexual behavior are associated with healthcare access, sexually transmitted infection testing, and HIV testing among cisgender gay, bisexual, and other men who have sex with men and transgender women across three cities in western Senegal.

Methods: Logistic regression assessed the relationship of three stigma scales (stigma from family and friends, anticipated healthcare stigma, and general social stigma) and depression with these outcomes.

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Molecular surveillance of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is growing in west Africa, especially in the Republic of Senegal. Here, we present a molecular epidemiology study of the early waves of SARS-CoV-2 infections in this country based on Bayesian phylogeographic approaches. Whereas the first wave in mid-2020 was characterized by a significant diversification of lineages and predominance of B.

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  • The Abbott Global Surveillance program is monitoring the ability of various diagnostic tests to detect different circulating variants of SARS-CoV-2, including major variants of concern like alpha, beta, gamma, and delta.
  • A study was conducted using live virus cultures and clinical samples, testing numerous Abbott assays for their effectiveness in identifying these variants.
  • Results showed that all molecular assays successfully detected 100% of variant patient specimens, while antigen tests also performed well, confirming the reliability of Abbott's diagnostics against ongoing viral diversity.
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  • * Researchers sequenced samples from the first two waves of the pandemic in Senegal, identifying new combinations of spike mutations that were unique to the second wave.
  • * The findings reveal ongoing local diversification of the virus and suggest that different lineages may be evolving escape mutations simultaneously.
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Background: Hemodialysis patients are among high-risk groups for COVID-19. Africa is the continent with the lowest number of cases in the general population but we have little information about the disease burden in dialysis patients.

Objectives: This study aimed to describe the seroprevalence of SARS-CoV-2 antibodies in the hemodialysis population of Senegal.

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  • The study focuses on evaluating the AMPLIX® real-time PCR technique for measuring hepatitis B virus (HBV) DNA in comparison to the established COBAS AmpliPrep™ method, which is crucial for managing chronic hepatitis B.
  • Results showed that the AMPLIX® technique demonstrated good reproducibility and repeatability across various viral load levels, with accuracy well within acceptable limits.
  • The correlation between viral load measurements from AMPLIX® and COBAS Taqman was very strong (0.97), indicating that AMPLIX® is a reliable option for monitoring HBV and can be utilized in intermediate laboratories.
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Introduction: Alternative drugs and diagnostics are needed for the treatment and control of schistosomiasis. The exclusive use of praziquantel (PZQ) in mass drug administration programmes may result in the emergence of drug resistance. PZQ has little activity against larvae, thus reinfection remains a problem in high-risk communities.

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