Aberrant RNA modifications can lead to dysregulated gene expression and impeded growth in plants. Ribosomal RNA (rRNA) constitutes a substantial portion of total RNA, while the precise functions and molecular mechanisms underlying rRNA modifications in plants remain largely elusive. Here, we elucidated the exclusive occurrence of the canonical RNA modification N-methyladenosine (mA) solely 18S rRNA, but not 25S rRNA.
View Article and Find Full Text PDFJoint models for longitudinal and time-to-event data are receiving increasing attention owing to its capability of capturing the possible association between these two types of data. Typically, a joint model consists of a longitudinal submodel for longitudinal processes and a survival submodel for the time-to-event response, and links two submodels by common covariates that may carry both fixed and random effects. However, research gaps still remain on how to simultaneously select fixed and random effects from the two submodels under the joint modeling framework efficiently and effectively.
View Article and Find Full Text PDFMicrobial electrolysis cell-assisted anaerobic digestion represents a promising approach for enhancing methanogenesis. This study investigated the impact of varying energy levels followed by long-term open circuit on biogas recovery from food waste. The results demonstrated that a mild voltage of 0.
View Article and Find Full Text PDFObjectives: Aggressive driving behavior can lead to potential traffic collision risks, and abnormal weather conditions can exacerbate this behavior. This study aims to develop recognition models for aggressive driving under various climate conditions, addressing the challenge of collecting sufficient data in abnormal weather.
Methods: Driving data was collected in a virtual environment using a driving simulator under both normal and abnormal weather conditions.
A major safety hazard for e-bike riders crossing an intersection is encountering heavy vehicles turning right in the same direction, which often results in severe casualties. Recently, some cities in China have implemented right-turn safety improvement treatments (i.e.
View Article and Find Full Text PDFThe rapid global emergence of antibiotic resistance genes (ARGs) is a substantial public health concern. Livestock manure serves as a key reservoir for tetracycline resistance genes (TRGs), serving as a means of their transmission to soil and vegetables upon utilization as a fertilizer, consequently posing a risk to human health. The dynamics and transfer of TRGs among microorganisms in vegetables and fauna are being investigated.
View Article and Find Full Text PDFGenomics Proteomics Bioinformatics
June 2024
The commonly-used drug susceptibility testing (DST) relies on bacterial culture and faces shortcomings such as long turnaround time and clone/subclone selection. We developed a targeted deep amplification sequencing (DAS) method directly applied to clinical specimens. In this DAS panel, we examined 941 drug-resistant mutations associated with 20 anti-tuberculosis drugs with an initial amount of 4 pg DNA and reduced clinical testing time from 20 days to two days.
View Article and Find Full Text PDFHepatitis B virus (HBV) integration exists throughout the clinical course of chronic hepatitis B (CHB). This study investigated the effects of long-term antiviral therapy on the level and profiles of transcriptionally active HBV integration. Serial liver biopsies and paired blood samples were obtained from 16, 16, and 22 patients with CHB at baseline, 78, and 260 weeks of entecavir monotherapy or combined with pegylated interferon alfa, respectively.
View Article and Find Full Text PDFEarly warning of driving risks can effectively prevent collisions. However, numerous studies that predicted driving risks have suffered from the use of single data sources, insufficiently advanced models, and lack of time window analysis. To address these issues, this paper proposes a self-attention-based bidirectional long short-term memory (Att-Bi-LSTM) network model to predict driving risk based on multi-source data.
View Article and Find Full Text PDFPlant Biotechnol J
September 2024
The N-methyladenosine (mA) mRNA modification is crucial for plant development and stress responses. In rice, the male sterility resulting from the deficiency of OsFIP37, a core component of mA methyltransferase complex, emphasizes the significant role of mA in male fertility. mA is reversible and can be removed by mA demethylases.
View Article and Find Full Text PDFEmotion is an important factor that can lead to the occurrence of aggressive driving. This paper proposes an association rule mining-based method for analysing contributing factors associated with aggressive driving behaviour among online car-hailing drivers. We collected drivers' emotion data in real time in a natural driving setting.
View Article and Find Full Text PDFAging entails the progressive decline in the body's self-regulation and functionality over time. Notably, obesity and aging exhibit parallel phenotypes, with obesity further accelerating the aging process across multiple dimensions and diminishing lifespan. In this study, we explored the impact of trans fatty acid (TFA) consumption on the overall health and lifespan of male Drosophila melanogaster under an isocaloric high-sugar and high-fat diet.
View Article and Find Full Text PDFBackground: Evidence has proven that liver fibrosis or even cirrhosis can be reversed by anti-HBV treatment. However, the difference of fibrosis regression rates in short-term and long-term antiviral therapy remain unclear. Therefore, we aimed to identify the dynamic changes in fibrosis regression rate in patients with three-time liver biopsies during 5 years antiviral therapy.
View Article and Find Full Text PDFAntarctica terrestrial ecosystems are facing the most threats from global climate change, which is altering plant composition greatly. These transformations may cause major reshuffling of soil community composition, including functional traits and diversity, and therefore affect ecosystem processes in Antarctica. We used high-throughput sequencing analysis to investigate soil nematodes under 3 dominant plant functional groups (lichens, mosses, and vascular plants) and bare ground in the Antarctic region.
View Article and Find Full Text PDFShrubs have developed various mechanisms for soil phosphorus utilization. Shrub encroachment caused by climate warming alters organic phosphorus mineralization capability by promoting available phosphorus absorption and mediating root exudates. However, few studies have explored how warming regulates the effects of dominant shrubs on soil organic phosphorus mineralization capability.
View Article and Find Full Text PDFTherapeutic neovascularization is a strategy to promote blood vessel growth and improve blood flow, which is critical to tissue repair and regeneration in ischemic diseases. Here, we investigated the role of endothelial progenitor cell - derived exosomes (EPC-Exos) in therapeutic neovascularization and clarified the mechanism of hsa_circ_0093884 in EPC-Exos mediated neovascularization. Injection of EPC-Exos improved mouse ischemic hindlimb perfusion, promoted angiogenesis in Matrigel plugs and mouse skin wound healing.
View Article and Find Full Text PDFRationale: Secondary hypertension is often caused by activation of complex multi-organ endocrine systems, while renin activity indicated by angiotensins (Angs), aldosterone (ALD) and cortisol (COR) in such systems are generally accepted as its diagnostic markers. As antibody-based methods cannot offer comparable quantification for these biomarkers, a liquid chromatography (LC)-tandem mass spectrometry (MS/MS)-based approach was developed to quantify them simultaneously and accurately.
Methods: Five different beads for magnetic solid-phase extraction (MSPE) were evaluated towards their enrichment efficiency for these biomarkers.
COVID-19 lockdown can lead to job adaptation disorders, which are heterogeneous among individuals. The purpose of this study was to explore the association between perceived social support and job adaptation disorders among workers in China during the COVID-19 pandemic. The questionnaires of Psychological Questionnaire for Public Health Emergencies, Multidimensional Scale of Perceived Social Support, Work Attitude Scale were used for this cross-section study via an online survey.
View Article and Find Full Text PDFThe aboveground plant communities are crucial in driving ecosystem functioning, particularly being the primary producers in terrestrial ecosystems. Numerous studies have investigated the impacts of aboveground plant communities on multiple ecosystem functions at α-scale. However, such critical effects have been unexplored at β-scale and the comparative assessment of the effects and underlying mechanisms of aboveground plant communities on α- and β-multifunctionality has been lacking.
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