Connecting land use-land cover and precipitation with organic matter biogeochemistry in a tropical river-estuary system of western peninsular India.

Organic matter (OM) composition changed due to land use ─ land cover (LULC) and hydrology modification, has distinctive linkage towards sustainable environment management in tropical river systems. It is crucial in small river systems, which experience delay of freshwater flow to the estuaries due to headwater damming, also LULC alteration along the entire basin. In order to understand this fundamental linkage in tropical Zuari river-estuary (ZRE), we analyzed multi-proxy data of organic carbon to total nitrogen ratio (C/N), stable organic carbon isotope (δC) and lignin phenols measured in seasonally collected suspended particulate matter (SPM) and sediment samples.

A Mesohaline Thraustochytrid Produces Extremely Halophilic Alpha-Amylases.

Halophilic bacteria are well known to produce highly salt-tolerant enzymes that have unusual applications in biotechnology. Production of halophilic proteins is generally not expected in mesohaline microorganisms. Ulkenia sp.

Assessment of the environmental health of an ecologically sensitive, semi-enclosed, basin - A water quality modelling approach.

Semi-enclosed basins are environmentally dynamic and some of the most anthropogenically affected components of the coastal realm. They can reflect various environmental impacts, thus qualifying as natural laboratories to study these impacts. The Gulf of Khambhat (GoK) is such a system where analysis of in situ parameters indicated polluted conditions.

Enhanced α-amylase production by a marine protist, Ulkenia sp. using response surface methodology and genetic algorithm.

Amylases are a group of enzymes with a wide variety of industrial applications. Enhancement of α-amylase production from the marine protists, thraustochytrids has been attempted for the first time by applying statistical-based experimental designs using response surface methodology (RSM) and genetic algorithm (GA) for optimization of the most influencing process variables. A full factorial central composite experimental design was used to study the cumulative interactive effect of nutritional components viz.

Bacterial bioluminescence response to long-term exposure to reverse osmosis treated effluents from dye industries.

The bacterial bioluminescence assay is one of the novel means for toxicity detection. The bioluminescence response of 2 marine bioluminescent bacteria was tested upon their long-term exposure to 9 different reverse osmosis (RO) rejects with varying chemical composition sampled from various dye industries. Bioluminescent bacteria were cultured in the RO reject samples, at different concentrations, and their growth rate and luminescence was measured for 24 h.

Identification and functional characterization of a Ku-binding motif in aprataxin polynucleotide kinase/phosphatase-like factor (APLF).

Aprataxin polynucleotide kinase/phosphatase-like factor (APLF) facilitates nonhomologous end joining (NHEJ) and associates with the core NHEJ components XRCC4-DNA ligase IV and Ku. The APLF forkhead-associated (FHA) domain directs interactions with XRCC4, but the APLF-Ku interaction has not been well characterized. Here we describe an evolutionarily conserved amino acid motif within APLF that is required for mediating the physical interaction between APLF and Ku.

The role of myosin phosphorylation in anaphase chromosome movement.

This work deals with the role of myosin phosphorylation in anaphase chromosome movement. Y27632 and ML7 block two different pathways for phosphorylation of the myosin regulatory light chain (MRLC). Both stopped or slowed chromosome movement when added to anaphase crane-fly spermatocytes.

The PARP3- and ATM-dependent phosphorylation of APLF facilitates DNA double-strand break repair.

APLF is a forkhead associated-containing protein with poly(ADP-ribose)-binding zinc finger (PBZ) domains, which undergoes ionizing radiation (IR)-induced and Ataxia-Telangiectasia Mutated (ATM)-dependent phosphorylation at serine-116 (Ser(116)). Here, we demonstrate that the phosphorylation of APLF at Ser(116) in human U2OS cells by ATM is dependent on poly(ADP-ribose) polymerase 3 (PARP3) levels and the APLF PBZ domains. The interaction of APLF at sites of DNA damage was diminished by the single substitution of APLF Ser(116) to alanine, and the cellular depletion or chemical inhibition of ATM or PARP3 also altered the level of accumulation of APLF at sites of laser-induced DNA damage and impaired the accumulation of Ser(116)-phosphorylated APLF at IR-induced γH2AX foci in human cells.

Evaluation of significant sources influencing the variation of water quality of Kandla creek, Gulf of Katchchh, using PCA.

To evaluate the significant sources contributing to water quality parameters, we used principal component analysis (PCA) for the interpretation of a large complex data matrix obtained from the Kandla creek environmental monitoring program. The data set consists of analytical results of a seasonal sampling survey conducted over 2 years at four stations. PCA indicates five principal components to be responsible for the data structure and explains 76% of the total variance of the data set.

Factors controlling physico-chemical characteristics in the coastal waters off Mangalore--a multivariate approach.

Water quality parameters (temperature, pH, salinity, DO, BOD, suspended solids, nutrients, PHc, phenols, trace metals--Pb, Cd and Hg, chlorophyll-a (chl-a) and phaeopigments) and the sediment quality parameters (total phosphorous, total nitrogen, organic carbon and trace metals) were analysed from samples collected at 15 stations along 3 transects off Karnataka coast (Mangalore harbour in the south to Suratkal in the north), west coast of India during 2007. The analyses showed high ammonia off Suratkal, high nitrite (NO(2)-N) and nitrate (NO(3)-N) in the nearshore waters off Kulai and high nitrite (NO(2)-N) and ammonia (NH(3)-N) in the harbour area. Similarly, high petroleum hydrocarbon (PHc) values were observed near the harbour, while phenols remained high in the nearshore waters of Kulai and Suratkal.

Influence of air-sea fluxes on chlorine isotopic composition of ocean water: implications for constancy in delta37Cl--a statistical inference.

The behaviors of chlorine isotopes in relation to air-sea flux variables have been investigated through multivariate statistical analyses (MSA). The MSA technique provides an approach to reduce the data set and was applied to a set of 7 air-sea flux variables to supplement and describe the variation in chlorine isotopic compositions (delta37Cl) of ocean water. The variation in delta37Cl values of surface ocean water from 51 stations in 4 major world oceans--the Pacific, Atlantic, Indian and the Southern Ocean has been observed from -0.