Publications by authors named "Shi-jie Ma"

Porcine epidemic diarrhea virus (PEDV) infection causes severe diarrhea and high mortality in neonatal piglets. Pseudorabies causes acute and often fatal infections in young piglets, respiratory disorders in growing pigs, and reproductive failure in sows. In late 2011, pseudorabies virus (PRV) variants occurred in Bartha-K61-vaccine-immunized swine herds, resulting in economic losses to the global pig industry.

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Porcine reproductive and respiratory syndrome caused by porcine reproductive and respiratory syndrome virus (PRRSV) is one of the most economically devastating viral diseases in the global pork industry. To further clarify the epidemic characteristics of the virus, 365 clinical samples were collected from diseased pigs suffering from abortion and respiratory disease from 2018 to 2023 on 63 pig farms in Henan and Shanxi provinces, and screened for the presence of PRRSV using reverse transcription-polymerase chain reaction (RT-PCR). A total of 62 clinical samples (62/365, 16.

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A TMSOTf-catalyzed C2-sulfenylation of indole alkaloids with -sulfenylsuccinimides has been developed. This straightforward, metal-free, and cost-effective catalytic system produces valuable 2-thioindole derivatives with yields ranging from moderate to excellent. The synthetic applicability demonstrated includes the total syntheses of isatindigotindolosides -.

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Porcine circoviruses (PCVs) are a significant cause of concern for swine health, with four genotypes currently recognized. Two of these, PCV3 and PCV4, have been detected in pigs across all age groups, in both healthy and diseased animals. These viruses have been associated with various clinical manifestations, including porcine dermatitis and nephropathy syndrome (PDNS) and respiratory and enteric signs.

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Article Synopsis
  • The study focuses on a copper-catalyzed reaction that successfully couples indoles with thiosuccinimides, yielding various sulfenylated compounds with good efficiency.
  • This method allows for thioarylation and thioglycosylation at the C2 position of indoles found in the plant Radix Isatidis through structural changes.
  • Additionally, the research achieved the first total syntheses of isatindigotindolosides III and IV and highlighted the role of sulfenyl bromides in the catalytic process.*
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  • Porcine circovirus type 2 (PCV2) is responsible for significant disease in pigs, with the dominant strain (PCV2d) not effectively controlled by many vaccines, leading to the need for better solutions.
  • A new recombinant virus, rPRV NY-gE/gI/TK/PCV2dCap, was developed using gene-editing techniques to create a vaccine that targets both PCV2d and pseudorabies virus (PRV).
  • In tests, the rPRV vaccine showed greater efficacy in eliciting immune responses and protecting against PCV2d and PRV infections compared to existing vaccines, indicating its potential as a effective immunization strategy for pigs.
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Porcine circovirus 4 (PCV4) is a recently discovered circovirus that was first reported in 2019 in several pigs with severe clinical disease in Hunan province of China, and also identified in pigs infected with porcine reproductive and respiratory syndrome virus (PRRSV). To further investigate the epidemic profile and genetic characteristics of the two viruses, 150 clinical samples were collected from 9 swine farms in Shaanxi and Henan provinces of China, and a SYBR Green I-based duplex quantitative real-time polymerase chain reaction (qPCR) was developed for detecting PCV4 and PRRSV simultaneously. The results showed the limits of detection were 41.

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Porcine circovirus 4 (PCV4) is a recently discovered circovirus that was first reported in 2019 in several pigs in Hunan province of China and has also been identified in pigs infected with porcine epidemic diarrhea virus (PEDV). To further investigate the coinfection and genetic diversity of these two viruses, 65 clinical samples (including feces and intestinal tissues) were collected from diseased piglets on 19 large-scale pig farms in Henan province of China, and a duplex SYBR Green I-based quantitative real-time polymerase chain reaction (qPCR) assay was developed for detecting PEDV and PCV4 simultaneously. The results showed that the limit of detection was 55.

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The cycloaddition reaction of -hydroxysuccinimide ester and isocyanatoacetate catalyzed by copper was described. A series of 4,5-disubstituted oxazole compounds, including ones derived from natural fatty acids, drugs, amino acids, and peptides, were obtained in moderate to high yields. The derivatization reaction was explored.

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Article Synopsis
  • A new circovirus species, porcine circovirus 4 (PCV4), has been found in farmed pigs and shown to cause disease in piglets, but its effects on dogs were previously unknown.
  • In a study of 217 fecal samples from diarrheal dogs in Henan Province, China, 5.99% tested positive for PCV4, indicating potential cross-species transmission, as PCV4 was detected in multiple cities.
  • The study also identified three genotypes of PCV4 and provided the first complete genome sequence from a dog with diarrhea, highlighting the need for further research on PCV4's role in canine illness.
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Imbalances in the gut microbiota mediate the progression of neurodegenerative diseases such as Parkinson's disease (PD). Fecal microbiota transplantation (FMT) is currently being explored as a potential therapy for PD. The objective of this study was to assess the efficacy and safety of FMT on PD.

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The interaction between Axin and DVL2 is critical for the breaking down of the beta-catenin destruction complex and the activation of the Wnt/beta-catenin cascade. However, this biological process remains poorly understood. In the present study, TM4SF1 was identified as the interacting partner of DVL2 and positively regulated as Wnt/beta-catenin signalling by strengthening the DVL2-Axin interaction.

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Background: Nidogen-2 (NID2) is a ubiquitous component in the basement membrane and plays an important role in the development of malignant tumors. However, the specific function and mechanism of the NID2 gene in gastric cancer remains unclear. In this study, we aimed to investigate the role of NID2 in gastric cancer(GC).

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  • Gastric cancer (GC) remains a significant global health issue, and the study aimed to create a gene model to evaluate the prognosis of GC patients.
  • Researchers analyzed gene expression data from gastric cancer patients using two datasets and applied statistical methods to identify genes associated with patient survival.
  • They discovered 854 differentially expressed genes, with a stable 5-Gene model identified that could help predict GC patient outcomes, potentially improving post-surgery treatment and follow-up care.
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Phosphogypsum is a phosphorus chemical waste which has not been managed and reused well, resultantly, causing environmental pollution and land-occupation. Phosphogypsum wastes were used as a soil amendment to assess the effect on wheat growth, yield and CO2 emissions from winter wheat fields. Its economic and environmental benefits were analyzed at the same time.

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The anaerobic ammonium oxidation (anammox) process, which can simultaneously remove ammonium and nitrite, both toxic to aquatic animals, can be very important to the aquaculture industry. Here, the presence and activity of anammox bacteria in the sediments of four different freshwater aquaculture ponds were investigated by using Illumina-based 16S rRNA gene sequencing, quantitative PCR assays and (15)N stable isotope measurements. Different genera of anammox bacteria were detected in the examined pond sediments, including Candidatus Brocadia, Candidatus Kuenenia and Candidatus Anammoxoglobus, with Candidatus Brocadia being the dominant anammox genus.

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Long interspersed nuclear element-1 (L1) retrotransposons are jumping genes that comprise 17% of human DNA. They utilize a ''copy-and-paste'' mechanism to propagate themselves throughout the genome via RNA intermediates, a process termed retrotransposition. L1s are active in the germ line and during embryogenesis, yet they are epigenetically suppressed in somatic cells.

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The RNA-guided nuclease CRISPR-Cas9 (clustered regularly interspaced short palindromic repeats-CRISPR associated nuclease 9) and its variants such as nickase Cas9, dead Cas9, guide RNA scaffolds and RNA-targeting Cas9 are convenient and versatile platforms for site-specific genome editing and epigenome modulation. They are easy-to-use, simple-to-design and capable of targeting multiple loci simultaneously. Given that cancer develops from cumulative genetic and epigenetic alterations, CRISPR-Cas9 and its variants (hereafter referred to as CRISPR-Cas9 systems) hold extensive application potentials in cancer modeling and therapy.

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In this study, we constructed an expression cassette containing the inducible lac promoter and the secretion signal from an S-layer protein of Lactobacillus brevis for the expression of porcine interferon-alpha (IFN-α) in Lactobacillus casei (Lb. casei). Reverse-transcriptase PCR verified the presence of porcine IFN-α mRNA in the recombinant Lb.

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Article Synopsis
  • The study details the complete nucleotide sequence of a new reassortant strain of infectious bursal disease virus (IBDV) identified in broiler flocks in China.
  • The genome is made up of two segments, A (3,232 nucleotides) and B (2,652 nucleotides), with origins from different strains: segment A from the vaccine strain B87 and segment B from the virulent strain OKYM.
  • This finding indicates the emergence of a novel IBDV strain in nature, highlighting potential implications for poultry health and vaccine effectiveness.
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Synopsis of recent research by authors named "Shi-jie Ma"

  • - Shi-Jie Ma's recent research predominantly focuses on the molecular characterization and detection of viral infections affecting the swine industry, particularly porcine epidemic diarrhea virus (PEDV), porcine reproductive and respiratory syndrome virus (PRRSV), and various porcine circoviruses (PCV3 and PCV4), emphasizing their genetic diversity and epidemiology in regions of China.
  • - His studies reveal significant findings regarding the immunogenicity of recombinant viruses, such as pseudorabies virus (PRV) expressing key epitopes, which could contribute to the development of effective vaccines against viral diseases like PRV and PCV2d that threaten swine health.
  • - In addition to viral research, Ma has also contributed to the field of organic chemistry, focusing on novel reactions for synthesizing thioindole derivatives and oxazines, showcasing his diverse academic interests and advancements in both virology and synthetic methods.