Publications by authors named "Shannon Knight"

Context.—: Primary thoracic neoplasms are rare in children, whereas nonneoplastic mass lesions or cysts and metastases are more common, and there is a relative paucity of comprehensive histopathologic and molecular data.

Objective.

View Article and Find Full Text PDF

Importance: In BAP1 tumor predisposition syndrome, clear cell renal cell carcinoma (RCC) is frequently associated with melanoma and/or mesothelioma, while germline MITF p.E318K alterations are being increasingly reported in melanoma/RCC. Limited data exist on the co-occurrence of melanoma and/or mesothelioma with renal neoplasia and the prevalence of associated germline alterations.

View Article and Find Full Text PDF

Gestational trophoblastic disease (GTD) is a heterogeneous group of lesions arising from placental tissue. Epithelioid trophoblastic tumor (ETT), derived from chorionic-type trophoblast, is the rarest form of GTD with only approximately 130 cases described in the literature. Due to its morphologic mimicry of epithelioid smooth muscle tumors and carcinoma, ETT can be misdiagnosed.

View Article and Find Full Text PDF

Tumor mutation burden (TMB) is an emerging biomarker of immunotherapy response. RNA sequencing in FFPE tissue samples was used for determining TMB in microsatellite-stable (MSS) and microsatellite instability-high (MSI-H) tumors in patients with colorectal or endometrial cancer. Tissue from tumors and paired normal tissue from 46 MSI-H and 12 MSS cases were included.

View Article and Find Full Text PDF
Article Synopsis
  • The CRISPR-Cas9 system allows precise editing of DNA by creating double-strand breaks that can be repaired to insert new genetic material, known as "knock-in."
  • This document presents two alternative knock-in techniques for adding fluorescent protein markers to Drosophila S2R+ cells: the ssDNA Drop-In method and the CRISPaint universal donor method, both of which streamline the process by eliminating the need for large plasmids.
  • The text also compares the standard knock-in method with the two alternative methods, discussing their respective advantages and limitations for tagging proteins in cultured cells.
View Article and Find Full Text PDF

We previously reported a CRISPR-mediated knock-in strategy into introns of genes, generating an transgenic library for multiple uses (Lee et al., 2018a). The method relied on double stranded DNA (dsDNA) homology donors with ~1 kb homology arms.

View Article and Find Full Text PDF