Storm events can mobilize nitrogen species from landscapes into streams, exacerbating eutrophication and threatening aquatic ecosystems as well as human health. However, the transport pathways and storm responses of different nitrogen forms remain elusive. We used high-frequency chemical and isotopic sampling to partition sources of stormwater runoff and determine transport pathways of multiple nitrogen forms in an agricultural catchment.
View Article and Find Full Text PDFGroundwater resources are vital to ecosystems and livelihoods. Excessive groundwater withdrawals can cause groundwater levels to decline, resulting in seawater intrusion, land subsidence, streamflow depletion and wells running dry. However, the global pace and prevalence of local groundwater declines are poorly constrained, because in situ groundwater levels have not been synthesized at the global scale.
View Article and Find Full Text PDFMany ramified, network-like patterns in nature, such as river networks or blood vessels, form as a result of unstable growth of moving boundaries in an external diffusive field. Here, we pose the inverse problem for the network growth-can the growth dynamics be inferred from the analysis of the final pattern? We show that by evolving the network backward in time one can not only reconstruct the growth rules but also get an insight into the conditions under which branch splitting occurs. Determining the growth rules from a single snapshot in time is particularly important for growth processes so slow that they cannot be directly observed, such as growth of river networks and deltas or cave passages.
View Article and Find Full Text PDFAutophagy is a eukaryotic cellular transport mechanism that delivers intracellular macromolecules, proteins, and even organelles to a lytic organelle (vacuole in yeast and plants/lysosome in animals) for degradation and nutrient recycling. The process is mediated by highly conserved autophagy-related (ATG) proteins. In plants, autophagy maintains cellular homeostasis under favorable conditions, guaranteeing normal plant growth and fitness.
View Article and Find Full Text PDFMost rivers exchange water with surrounding aquifers. Where groundwater levels lie below nearby streams, streamwater can infiltrate through the streambed, reducing streamflow and recharging the aquifer. These 'losing' streams have important implications for water availability, riparian ecosystems and environmental flows, but the prevalence of losing streams remains poorly constrained by continent-wide in situ observations.
View Article and Find Full Text PDFFlow of non-Newtonian fluids through topologically complex structures is ubiquitous in most biological, industrial and environmental settings. The interplay between local hydrodynamics and the fluid's constitutive law determines the distribution of flow paths. Consequently the spatial heterogeneity of the viscous resistance controls mass and solute transport from the micron to the meter scale.
View Article and Find Full Text PDFSeawater intrusion into coastal aquifers can increase groundwater salinity beyond potable levels, endangering access to freshwater for millions of people. Seawater intrusion is particularly likely where water tables lie below sea level, but can also arise from groundwater pumping in some coastal aquifers with water tables above sea level. Nevertheless, no nation-wide, observation-based assessment of the scope of potential seawater intrusion exists.
View Article and Find Full Text PDFYield losses caused by fungal pathogens represent a major threat to global food production. One of the most devastating fungal wheat pathogens is Zymoseptoria tritici. Despite the importance of this fungus, the underlying mechanisms of plant-pathogen interactions are poorly understood.
View Article and Find Full Text PDFPlants associate with a wide diversity of microorganisms. Some microorganisms engage in intimate associations with the plant host, collectively forming a metaorganism. Such close coexistence with plants requires specific adaptations that allow microorganisms to overcome plant defenses and inhabit plant tissues during growth and reproduction.
View Article and Find Full Text PDFMany filamentous plant pathogens exhibit high levels of genomic variability, yet the impact of this variation on host-pathogen interactions is largely unknown. We have addressed host specialization in the wheat pathogen . Our study builds on comparative analyses of infection and gene expression phenotypes of three isolates and reveals the extent to which genomic variation translates into phenotypic variation.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
September 2018
The formation of droplets is ubiquitous in many natural and industrial processes and has reached an unprecedented level of control with the emergence of milli- and microfluidics. Although important insight into the mechanisms of droplet formation has been gained over the past decades, a sound understanding of the physics underlying this phenomenon and the effect of the fluid's flow and wetting properties on the droplet size and production rate is still missing, especially for the widely applied method of step emulsification. In this work, we elucidate the physical controls of microdroplet formation in step emulsification by using the wetting of fluidic channels as a tunable parameter to explore a broad set of emulsification conditions.
View Article and Find Full Text PDFMars' surface bears the imprint of valley networks formed billions of years ago. Whether these networks were formed by groundwater sapping, ice melt, or fluvial runoff has been debated for decades. These different scenarios have profoundly different implications for Mars' climatic history and thus for its habitability in the distant past.
View Article and Find Full Text PDFStreams shape landscapes through headward growth and lateral migration. When these streams are primarily fed by groundwater, recent work suggests that their tips advance to maximize the symmetry of the local Laplacian field associated with groundwater flow. We explore the extent to which such forcing is responsible for the lateral migration of streams by studying two features of groundwater-fed streams in Bristol, Florida: their confluence angle near junctions and their curvature.
View Article and Find Full Text PDFProc Math Phys Eng Sci
June 2017
Valleys that form around a stream head often develop characteristic finger-like elevation contours. We study the processes involved in the formation of these valleys and introduce a theoretical model that indicates how shape may inform the underlying processes. We consider valley growth as the advance of a moving boundary travelling forward purely through linearly diffusive erosion, and we obtain a solution for the valley shape in three dimensions.
View Article and Find Full Text PDFInspired by river networks and other structures formed by Laplacian growth, we use the Loewner equation to investigate the growth of a network of thin fingers in a diffusion field. We first review previous contributions to illustrate how this formalism reduces the network's expansion to three rules, which respectively govern the velocity, the direction, and the nucleation of its growing branches. This framework allows us to establish the mathematical equivalence between three formulations of the direction rule, namely geodesic growth, growth that maintains local symmetry, and growth that maximizes flux into tips for a given amount of growth.
View Article and Find Full Text PDFCalcium-dependent protein kinases undergo a rapid biochemical activation in response to an intracellular Ca increase induced by the PRR-dependent perception of a pathogen-related stimulus. Based on SDS gel resolution, the in-gel kinase assay allows the analysis of multiple in vivo protein samples in parallel, combining the advantage of protein separation according to molecular mass with the activity read-out of a protein kinase assay. It thus enables to follow the transient CDPK activation and inactivation in response to in vivo elicitation with a time-wise resolution.
View Article and Find Full Text PDFRiver networks exhibit a complex ramified structure that has inspired decades of studies. However, an understanding of the propagation of a single stream remains elusive. Here we invoke a criterion for path selection from fracture mechanics and apply it to the growth of streams in a diffusion field.
View Article and Find Full Text PDFCa2+ is a ubiquitous second messenger for cellular signalling in various stresses and developmental processes. Here, we summarize current developments in the roles of Ca2+ during plant immunity responses. We discuss the early perception events preceding and necessary for triggering cellular Ca2+ fluxes, the potential Ca2+-permeable channels, the decoding of Ca2+ signals predominantly via Ca2+-dependent phosphorylation events and transcriptional reprogramming.
View Article and Find Full Text PDFAs water erodes a landscape, streams form and channellize the surficial flow. In time, streams become highly ramified networks that can extend over a continent. Here, we combine physical reasoning, mathematical analysis and field observations to understand a basic feature of network growth: the bifurcation of a growing stream.
View Article and Find Full Text PDFAs water erodes a landscape, streams form and channellize the surficial flow. In time, streams become highly ramified networks that can extend over a continent. Here, we combine physical reasoning, mathematical analysis and field observations to understand a basic feature of network growth: the bifurcation of a growing stream.
View Article and Find Full Text PDFIn animals and plants, pathogen recognition triggers the local activation of intracellular signaling that is prerequisite for mounting systemic defenses in the whole organism. We identified that Arabidopsis thaliana isoform CPK5 of the plant calcium-dependent protein kinase family becomes rapidly biochemically activated in response to pathogen-associated molecular pattern (PAMP) stimulation. CPK5 signaling resulted in enhanced salicylic acid-mediated resistance to the bacterial pathogen Pst DC3000, differential plant defense gene expression, and synthesis of reactive oxygen species (ROS).
View Article and Find Full Text PDFBearings are mechanical dissipative systems that, when perturbed, relax toward a synchronized (bearing) state. Here we find that bearings can be perceived as physical realizations of complex networks of oscillators with asymmetrically weighted couplings. Accordingly, these networks can exhibit optimal synchronization properties through fine-tuning of the local interaction strength as a function of node degree [Motter, Zhou, and Kurths, Phys.
View Article and Find Full Text PDFThe geometric complexity of stream networks has been a source of fascination for centuries. However, a comprehensive understanding of ramification--the mechanism of branching by which such networks grow--remains elusive. Here we show that streams incised by groundwater seepage branch at a characteristic angle of 2π/5 = 72°.
View Article and Find Full Text PDFThe tyrosine-sulfated peptides PSKα and PSY1 bind to specific leucine-rich repeat surface receptor kinases and control cell proliferation in plants. In a reverse genetic screen, we identified the phytosulfokine (PSK) receptor PSKR1 as an important component of plant defense. Multiple independent loss-of-function mutants in PSKR1 are more resistant to biotrophic bacteria, show enhanced pathogen-associated molecular pattern responses and less lesion formation after infection with the bacterial pathogen Pseudomonas syringae pv.
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