Publications by authors named "Sefa Celi̇k"

The development and progression of osteoarthritis (OA) are believed to involve inflammation. This study aimed to investigate the effects of applying therapeutic ultrasound (US) to human osteoarthritic chondrocytes in continuous and pulsed modes on cell proliferation and proinflammatory cytokine levels. Human osteoarthritic chondrocytes (HC-OA 402OA-05a) were proliferated in appropriate media and then seeded into culture plates.

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The detection of intracellular biothiols (cysteine, N-acetyl cysteine, and glutathione) with high selectivity and sensitivity is important to reveal biological functions. In this study, a 2-(2-methoxy-4-methylphenoxy)-3-chloro-5,8-dihydroxynaphthalene-1,4-dione (DDN-O) compound was newly synthesized and used as a fluorogenic probe (detector molecule) in the fluorometric method for the rapid, highly selective, and sensitive determination of biothiols. The intensity values (λ = 260 nm, λ = 620 nm) of the product were measured by adding biothiols to the reaction medium at varying concentrations and the glutathione equivalent thiol content values of each biothiol were calculated.

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  • The study aimed to compare the cytotoxicity of two bioceramic-based root canal sealers (Bioserra and AH Plus Bio) and two epoxy resin-based sealers (Sealart and AH Plus) on Saos-2 cells.
  • Researchers used various methods including the MTT assay for metabolic activity, qRT-PCR to measure gene expression, and western blotting for protein analysis, alongside assessing oxidative stress indicators.
  • Results showed AH Plus Bio exhibited the best biocompatibility, while Sealart was the most cytotoxic; Bioserra was generally biocompatible but increased certain gene expressions, indicating a need for careful selection of sealers in dental applications.
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  • The study investigates how bisphenol A (BPA), a common plastic chemical, impacts the formation and health of primordial follicles in the ovary, which are key for female reproduction.
  • It highlights the crucial role of the Notch signaling pathway in the communication between oocytes and pregranulosa cells for Folliculogenesis, which BPA might disrupt.
  • The research findings reveal that BPA exposure affects the number of ovarian follicles, levels of cell death (apoptosis), and the expression of Notch2 and Jagged2 proteins, with effects varying based on the dosage and timing of exposure.
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Lung cancer is the most common cause of cancer-related mortality, chemo-resistance, and toxicity limit treatment. The focus is on innovative combined phytotherapy to improve treatment outcomes. Our aim was to investigate the potential effects of daidzein nanosuspension (DZ-NS) and its combination with cisplatin (CIS) on A549 non-small lung cancer cells.

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Purpose: This study aims to determine the anti-inflammatory, antioxidant, and anti-apoptotic effects of valproic acid (VPA) on rat spinal cord tissue in ischemia-reperfusion (IR) injury model created by abdominal aorta occlusion.

Materials And Methods: Sprague Dawley rat (male sex) weighing 190-260 g divided into four experimental groups: control only underwent laparotomy, sham group, pre-IR injury (200 mg/kg dose), and post-IR injury (300 mg/kg) VPA. We measured serum levels of TNF-, IL-6, IL-1, IL-18, Total Oxidant Status (TOS) and Total Antioxidant Status (TAS), and serum Oxidative Stress Index (OSI) ratio, and tissue expression of Bax and Bcl2, Caspase3, and Bax/Bcl2 ratio.

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In this study, the structural and anticancer properties of aminopterin, as well as its antiviral characteristics, were elucidated. The preferred conformations of the title molecule were investigated with semiempirical AM1 method, and the obtained the lowest energy conformer was then optimized by using density functional (DFT/B3LYP) method with 6-311++G(d,p) as basis set. The vibrational frequencies of the optimized structure were calculated by the same level of theory and were compared with the experimental values.

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The present study investigated that chitosan production of Rhizopus oryzae NRRL 1526 and Aspergillus niger ATCC 16404. Fungal chitosans were characterized by scanning electron microscopy (SEM)-energy dispersive X-ray analysis, Fourier transform infrared spectroscopy (FTIR), differential scanning calorimeter and deacetylation degrees of fungal chitosans were determined. The percentage yield of Ro-chitosan and An-chitosan were determined as 18.

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Waste management has come to the fore in the whole world with the increasing impact of the Covid-19 pandemic along with concerns about human health, environmental threats, and socio-economic factors, etc. Medical waste is one of the waste types that need special management processes including particularly collection, storage, separation, and disposal. Healthcare activities create a great amount of medical waste deriving from the hospitals.

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Vinorelbine, a vinca alkaloid, is an antimitotic drug that inhibits polymerisation process of tubulins to microtubules, and is widely used in cancer chemotherapy. Due to the importance of the structure-activity relationship, in this work the conformational preferences of the vinorelbine molecule were surched by PM3 method. The obtained lowest energy conformer was then optimized at DFT/B3LYP/6-31G(d,p) level of theory and the structural characteristics were determined.

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  • The study aimed to explore the connection between calcium metabolism-related factors and temporomandibular joint (TMJ) disk displacement with reduction (DDWR) among TMD patients and healthy controls.
  • The research included 50 patients with TMD and 50 healthy individuals, examining various biochemical markers, revealing lower calcium levels and higher rates of severe vitamin D deficiency in the TMD group.
  • The findings suggest that deficiencies in calcium and vitamin D might be linked to TMJ DDWR, indicating the need for evaluation and potential correction of these deficiencies in TMD patients.
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Aim: To analyse the effect of endotracheal tube cuff pressure control measures on the microaspiration of the stomach contents by measuring at the level of pepsin in deep tracheal aspiration.

Design: A single-blind, randomised controlled trial.

Methods: This trial protocol was reported using the SPIRIT checklist.

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Objective: Dietary recommendations, in addition to medications, have recently become important in the treatment of heart failure. Our study aimed to show the positive effects of both milk chocolate and dark chocolate on heart failure through endothelial functions.

Methods: Twenty patients with heart failure and reduced ejection fraction were included in the study.

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  • - The study examined the toxicity of various pesticides on rat liver and investigated whether lupeol could mitigate this toxicity.
  • - Male Wistar rats were divided into groups receiving either control substances or different pesticides, with some groups also receiving lupeol for comparison over ten days.
  • - Results showed severe liver damage and oxidative stress from pesticides, while lupeol appeared to have a protective effect against this damage.
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  • * The study utilized docking studies to evaluate EQRPR's interaction with key proteins like EGFR and Fyn, suggesting its potential effectiveness in cancer treatment and ability to combat drug resistance.
  • * Additional analyses on the pentapeptides' pharmacological properties, including ADME and toxicity, were conducted to assess their suitability as therapeutic agents against cancer.
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Bioactive peptides derived from food proteins are becoming increasingly popular due to the growing awareness of their health-promoting properties. The structure and mechanism of anti-cancer action of pentapeptide Glu-Gln-Arg-Pro-Arg (EQRPR) derived from a rice bran protein are not known. Theoretical and experimental methods were employed to fill this gap.

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  • Workers in marble processing plants are exposed to harmful marble dust containing silica, leading to potential genetic and immune system issues.
  • The study assessed the health effects on 48 workers, finding lower levels of protective enzymes and higher DNA damage compared to a control group of 41 individuals.
  • Results suggest that prolonged exposure to marble dust is linked to increased genotoxic and immunotoxic risks among marble industry workers.
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The theoretically possible most stable conformation of the cyclic dipeptide, which has a significant anticancer activity, was examined by conformational analysis method and then by DFT calculations. With DFT calculations, cyclo(Ala-His) dipeptide was found to be more stable in boat form than in planar conformation. Moreover, conformations of the dimeric forms of the title molecule were investigated.

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Introduction: Severe local and systemic tissue injury develop during reperfusion, which is a period during which arterial blood flow and tissue oxygenation are re-established. In this study, we aimed to investigate the anti-inflammatory, antioxidant and protective effects of nesfatin in IR damage developing in liver.

Material And Methods: Twenty-four male Wistar-Albino rats were divided to three groups which contained eight rats in all groups.

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Introduction: The purpose of this study is to determine the post-treatment levels of total oxidant status (TOS) and total antioxidant status (TAS), that are increased due to pathophysiology, and to compare those with pre-treatment levels in allergic rhinitis patients. Among 84 patients clinically diagnosed with allergic rhinitis, 31 patients were started only on nasal steroid treatment (mometasone furoate), and 53 patients were started on nasal steroid and oral antihistamine treatment (mometasone furoate + rupatadine fumarate 10 mg). Blood samples were taken from the patients at the first examination and at post-treatment month 1.

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A new nickel(II) complex was synthesized by using -propyl-thiosemicarbazide and 2-amino-3,5-dibromobenzaldehyde. The complex, obtained by the template effect of nickel ions, was structurally analysed by experimental and theoretical vibrational spectroscopy, NMR and density functional theory (DFT) calculations. By using DFT/B3LYP method with 6-311++G(d, p) basis set, the most stable molecular structure of the title molecule was calculated.

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Density functional theory calculations were performed with DFT method using both b3lyp/6-311++G(d,p) and wb97xd/6-311++G(d,p) levels of theory to predict the molecular geometry, to evaluate the molecular electrostatic potential and frontier molecular orbitals of synthesized a new compound: caprolactam-glysine cluster (CL-Gly). Molecular docking study of the CL-Gly was carried out to clarify the interaction and the probable binding modes, between the title compound and DNA. The antibacterial activities of CL-Gly cluster against Gram-positive and Gram-negative bacteria was determined.

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Background/aim: Young-onset hypertension is a form of condition diagnosed in patients aged below 40. Cytokines such as interleukin (IL)-6 and also MCP-1 may play a role in the development of arterial hypertension. Aortic stiffness can be detected by measuring pulse wave velocity (PWV).

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A new ionic liquid was synthesized by the reaction of caprolactam with salicylic acid (CL-SA) and characterized by analysis of spectroscopic and DSC data. The optimized geometry and the electrostatic potential map of CL-SA were calculated with DFT method using the wb97xd/6-31++G(d,p) level of theory. Molecular docking study of the CL-SA was carried out to clarify the probable binding modes between the title compound and DNA and COX-2 and TOPII enzymes.

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