Publications by authors named "Sebastian Giusti"

Article Synopsis
  • Circular RNAs (circRNAs) are noncoding RNAs, and many have unknown biological functions due to challenges in studying them.
  • This study specifically investigated circTulp4, a circRNA found in the brain, by creating a mouse model that lacks circTulp4 while preserving normal mRNA and protein levels.
  • The findings show that circTulp4 is essential for proper brain function, influencing neurotransmission and responses to negative stimuli, highlighting the importance of circRNAs in neural regulation.
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Article Synopsis
  • A subset of circular RNAs (circRNAs) and linear RNAs can block microRNA activity, with some RNAs leading to microRNA degradation via a process called Target RNA-Directed MicroRNA Degradation (TDMD).
  • In this study, researchers explored how the shape (circular vs. linear) of RNA targets impacts TDMD, finding that the circular RNA Cdr1as protects the microRNA miR-7, while an artificial linear version promotes its degradation.
  • The findings suggest that RNA circularity significantly affects TDMD dynamics, influencing the stability and activity of specific microRNAs beyond just their nucleotide sequences.
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Förster resonance energy transfer (FRET) imaging methods provide unique insight into the spatial distribution of energy transfer and (bio)molecular interaction events, though they deliver average information for an ensemble of events included in a diffraction-limited volume. Coupling super-resolution fluorescence microscopy and FRET has been a challenging and elusive task. Here, we present STED-FRET, a method of general applicability to obtain super-resolved energy transfer images.

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Article Synopsis
  • Neddylation, a type of protein modification similar to ubiquitination, is not as well-understood, especially regarding its non-cullin substrates.
  • Researchers developed a method called serial NEDD8-ubiquitin substrate profiling (sNUSP) to identify neddylation sites in proteins, discovering 607 sites influenced by specific inhibitors and enzymes.
  • One significant finding was the neddylation of the actin regulator cofilin at lysine 112, which impacts neuronal development by affecting actin dynamics and neurite growth, highlighting its role in neuronal organization.
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Circular RNAs (circRNAs) are an endogenous class of animal RNAs. Despite their abundance, their function and expression in the nervous system are unknown. Therefore, we sequenced RNA from different brain regions, primary neurons, isolated synapses, as well as during neuronal differentiation.

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Neddylation is a ubiquitylation-like pathway that controls cell cycle and proliferation by covalently conjugating Nedd8 to specific targets. However, its role in neurons, nonreplicating postmitotic cells, remains unexplored. Here we report that Nedd8 conjugation increased during postnatal brain development and is active in mature synapses, where many proteins are neddylated.

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MicroRNAs (miRNAs) are conserved noncoding RNAs that function as posttranscriptional regulators of gene expression. miR-9 is one of the most abundant miRNAs in the brain. Although the function of miR-9 has been well characterized in neural progenitors, its role in dendritic and synaptic development remains largely unknown.

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Genetic mouse models based on the Cre-loxP system have been extensively used to explore the influence of specific gene deletions on different aspects of behavioral neurobiology. However, the interpretation of the effects attributed to the gene deletion might be obscured by potential side effects secondary to the Cre recombinase transgene insertion or Cre activity, usually neither controlled nor reported. Here, we performed a comprehensive behavioral analysis of endophenotypes of neuropsychiatric disorders in the extensively used Nestin(Cre) mouse line, commonly employed to restrict genetic modifications to the CNS.

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Motor neurons in the vertebrate spinal cord are stereotypically organized along the rostro-caudal axis in discrete columns that specifically innervate peripheral muscle domains. Originating from the same progenitor domain, the generation of spinal motor neurons is orchestrated by a spatially and temporally tightly regulated set of secreted molecules and transcription factors such as retinoic acid and the Lim homeodomain transcription factors Isl1 and Lhx1. However, the molecular interactions between these factors remained unclear.

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The molecular pathways underlying the neuroprotective effects of preconditioning are promising, potentially drugable targets to promote cell survival. However, these pathways are complex and are not yet fully understood. In this study we have established a paradigm of hypoxic preconditioning based on a chick embryo model of normobaric acute hypoxia previously developed by our group.

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This paper describes modifications of the standard methods for obtaining a soluble nuclear fraction from embryonic brain tissue. The main improvements are: (1) the inclusion of a low speed centrifugation step to prevent the appearance of high density contaminants, (2) a sucrose density gradient to remove perinuclear mitochondria and ER membranes and (3) a protein extraction approach which significantly enhances protein yield. To demonstrate the effectiveness of the method, pellets were analyzed by light and electron microscopy and purity of the soluble extracts was immunologically tested.

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NO-mediated toxicity contributes to neuronal damage after hypoxia; however, the molecular mechanisms involved are still a matter of controversy. Since mitochondria play a key role in signalling neuronal death, we aimed to determine the role of nitrative stress in hypoxia-induced mitochondrial damage. Therefore, we analysed the biochemical and ultrastructural impairment of these organelles in the optic lobe of chick embryos after in vivo hypoxia-reoxygenation.

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