Publications by authors named "Scott Ratliff"

Background: Exposure to psychosocial stress is linked to a variety of negative health outcomes, including cardiovascular disease and its cardiometabolic risk factors. DNA methylation has been associated with both psychosocial stress and cardiometabolic disease; however, little is known about the mediating role of DNA methylation on the association between stress and cardiometabolic risk. Thus, using the high-dimensional mediation testing method, we conducted an epigenome-wide mediation analysis of the relationship between psychosocial stress and ten cardiometabolic risk factors in a multi-racial/ethnic population of older adults (n = 2668) from the Health and Retirement Study (mean age = 70.

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The relationship between mitochondrial DNA (mtDNA) heteroplasmy and nuclear DNA (nDNA) methylation (CpGs) remains to be studied. We conducted an epigenome-wide association analysis of heteroplasmy burden scores across 10,986 participants (mean age 77, 63% women, and 54% non-White races/ethnicities) from seven population-based observational cohorts. We identified 412 CpGs (FDR p < 0.

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  • This study investigates the link between an epigenetic risk score (ERS) related to alcohol consumption and blood pressure traits, finding significant associations between higher ERS and increased blood pressure levels among participants.
  • In the analysis of 3,898 individuals from the Framingham Heart Study, each unit increase in the ERS correlated with a rise in systolic blood pressure (SBP) by almost 2 mm Hg and diastolic blood pressure (DBP) by about 0.68 mm Hg.
  • The research suggests that the ERS could serve as a useful tool for assessing cardiovascular risks linked to alcohol consumption, especially in cases where self-reported data may be unreliable.
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Growing evidence has linked inflammatory processes to cognitive decline and dementia. This work examines whether an epigenetic marker of C-reactive protein (CRP), a common clinical inflammatory biomarker, may mediate the relationship between educational attainment and cognition. We first evaluated whether 53 previously reported CRP-associated DNA methylation sites (CpGs) are associated with CRP, both individually and aggregated into a methylation risk score (MRSCRP), in 3 298 participants from the Health and Retirement Study (HRS, mean age = 69.

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Background: Dyslipidemia, which is characterized by an unfavorable lipid profile, is a key risk factor for cardiovascular disease (CVD). Understanding the relationships between epigenetic aging and lipid levels may help guide early prevention and treatment efforts for dyslipidemia.

Methods: We used weighted linear regression to cross-sectionally investigate the associations between five measures of epigenetic age acceleration estimated from whole blood DNA methylation (HorvathAge Acceleration, HannumAge Acceleration, PhenoAge Acceleration, GrimAge Acceleration, and DunedinPACE) and four blood lipid measures (total cholesterol (TC), LDL-C, HDL-C, and triglycerides (TG)) in 3,813 participants (mean age = 70 years) from the Health and Retirement Study (HRS).

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  • Scientists studied how drinking alcohol affects our DNA and blood pressure.
  • They found that for each drink a person consumes daily, blood pressure increases a bit and they are more likely to develop high blood pressure.
  • However, over time, drinking habits didn't seem to change blood pressure levels, showing that tracking alcohol effects can help understand health.
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Systemic low-grade inflammation is a feature of chronic disease. C-reactive protein (CRP) is a common biomarker of inflammation and used as an indicator of disease risk; however, the role of inflammation in disease is not completely understood. Methylation is an epigenetic modification in the DNA which plays a pivotal role in gene expression.

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  • Scientists studied how drinking alcohol affects our health by looking at changes in our DNA caused by alcohol, called DNA methylation.
  • They created a special score to measure the effects of alcohol on people's health using data from nearly 4,000 people.
  • They found that higher alcohol consumption was linked to increased blood pressure, but it didn't change over time or cause long-term issues with high blood pressure.
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Background: Dyslipidemia, which is characterized by an unfavorable lipid profile, is a key risk factor for cardiovascular disease (CVD). Understanding the relationships between epigenetic aging and lipid levels may help guide early prevention and treatment efforts for dyslipidemia.

Methods: We used weighted linear regression to cross-sectionally investigate the associations between five measures of epigenetic age acceleration estimated from whole blood DNA methylation (HorvathAge Acceleration, HannumAge Acceleration, PhenoAge Acceleration, GrimAge Acceleration, and DunedinPACE) and four blood lipid measures (total cholesterol (TC), LDL-C, HDL-C, and triglycerides (TG)) in 3,813 participants (mean age = 70 years) from the Health and Retirement Study (HRS).

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Long-term psychosocial stress is strongly associated with negative physical and mental health outcomes, as well as adverse health behaviours; however, little is known about the role that stress plays on the epigenome. One proposed mechanism by which stress affects DNA methylation is through health behaviours. We conducted an epigenome-wide association study (EWAS) of cumulative psychosocial stress ( = 2,689) from the Health and Retirement Study (mean age = 70.

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Epigenetic biomarkers of accelerated aging have been widely used to predict disease risk and may enhance our understanding of biological mechanisms between early-life adversity and disparities in aging. With respect to childhood adversity, most studies have used parental education or childhood disadvantage and/or have not examined the role played by socioemotional or physical abuse and trauma in epigenetic profiles at older ages. This study leveraged data from the Multi-Ethnic Study of Atherosclerosis (MESA) on experiences of threat and deprivation in participants' early lives (i.

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  • Previous research indicates a link between lower mitochondrial DNA (mtDNA) copy number and neurodegenerative diseases, prompting investigation into the relationship between mtDNA CN in blood and Alzheimer disease endophenotypes.
  • The study involved dementia-free individuals from various community cohorts, measuring mtDNA CN and analyzing its association with cognitive function and brain MRI markers over specified timeframes.
  • Findings showed that higher mtDNA CN correlates with better cognitive performance, independent of several confounding factors, with consistent results observed in both cross-sectional and prospective analyses, although the latter showed a weaker association.
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  • Fibrinogen is crucial for blood clotting and inflammation, and its circulating levels may be influenced by differences in DNA methylation at specific CpG sites.
  • An epigenome-wide association study analyzed blood DNA methylation and fibrinogen levels in over 18,000 diverse participants, revealing significant associations through advanced statistical models.
  • The study identified a total of 83 replicated CpG sites linked to fibrinogen, highlighting genes involved in inflammation, with many associations being affected but still significant after adjusting for C-reactive protein (CRP) levels.
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SNPs in confer the largest genetic risk for Alzheimer's Disease (AD) in African Americans (AA) after ε4. However, the relationship between and cognitive function has not been thoroughly examined. We investigated the effects of five known AD risk SNPs and 72 CpGs in , as well as their interactions, on general cognitive function (cognition) in 634 older AA without dementia from Genetic Epidemiology Network of Arteriopathy (GENOA).

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The epigenome likely interacts with traditional and genetic risk factors to influence blood pressure. We evaluated whether 13 previously reported DNA methylation sites (CpGs) are associated with systolic (SBP) or diastolic (DBP) blood pressure, both individually and aggregated into methylation risk scores (MRS), in 3070 participants (including 437 African ancestry (AA) and 2021 European ancestry (EA), mean age = 70.5 years) from the Health and Retirement Study.

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Left ventricular (LV) hypertrophy (LVH) is an independent risk factor for cardiovascular disease, and African Americans experience a disparate high risk of LVH. Genetic studies have identified potential candidate genes and variants related to the condition. Epigenetic modifications may continue to help unravel disease mechanisms.

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Low socioeconomic status (SES) and living in a disadvantaged neighborhood are associated with poor cardiovascular health. Multiple lines of evidence have linked DNA methylation to both cardiovascular risk factors and social disadvantage indicators. However, limited research has investigated the role of DNA methylation in mediating the associations of individual- and neighborhood-level disadvantage with multiple cardiovascular risk factors in large, multi-ethnic, population-based cohorts.

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Estimates from genome-wide association studies (GWAS) of unrelated individuals capture effects of inherited variation (direct effects), demography (population stratification, assortative mating) and relatives (indirect genetic effects). Family-based GWAS designs can control for demographic and indirect genetic effects, but large-scale family datasets have been lacking. We combined data from 178,086 siblings from 19 cohorts to generate population (between-family) and within-sibship (within-family) GWAS estimates for 25 phenotypes.

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Educational inequalities in all-cause mortality have been observed for decades. However, the underlying biological mechanisms are not well known. We aimed to assess the role of DNA methylation changes in blood captured by epigenetic clocks in explaining these inequalities.

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Background: DNA methylation, an epigenetic mechanism modulated by lifestyle and environmental factors, may be an important biomarker of complex diseases including cardiovascular diseases (CVD) and subclinical atherosclerosis.

Methods: DNA methylation in peripheral blood samples from 391 African-Americans from the Genetic Epidemiology Network of Arteriopathy (GENOA) was assessed at baseline, and atherosclerosis was assessed 5 and 12 years later. Using linear mixed models, we examined the association between previously identified CpGs for coronary artery calcification (CAC) and carotid plaque, both individually and aggregated into methylation risk scores (MRS and MRS), and four measures of atherosclerosis (CAC, abdominal aorta calcification (AAC), ankle-brachial index (ABI), and multi-site atherosclerosis based on gender-specific quartiles of the single-site measures).

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  • * A large study investigated blood-based DNA methylation patterns in relation to kidney function and found 69 DNA sites linked to estimated glomerular filtration rate and 7 to urinary albumin-to-creatinine ratio, pointing to potential genetic markers for CKD.
  • * Further validation in kidney tissue highlighted specific genes associated with kidney function and suggested that certain DNA methylation changes could have causal effects, implicating pathways in blood cell migration and immune response related to kidney health.
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  • * The study identified 100 significant CpG sites that account for 11.6% of serum urate variance, particularly noting five CpGs associated with SLC2A9, a major gene influencing serum urate levels.
  • * Additionally, some of these CpGs also appear to mediate effects of genetic variants related to serum urate and are linked to metabolic syndrome, suggesting a potential blood DNA methylation signature for assessing cardiometabolic risk factors.
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  • Epigenetic clocks are tools used to assess biological aging and predict disease risk, revealing connections between aging and socioeconomic factors.
  • Researchers conducted a detailed analysis across two large studies in the US, finding significant links between socioeconomic status (SES) and specific epigenetic clocks, particularly GrimAge and DunedinPoAm.
  • The study shows that while health behaviors like smoking and obesity play a role, they don't fully account for the SES effects on biological aging, suggesting that both genetic risk and social disadvantages contribute to faster aging.
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  • The study investigates genetic and environmental factors influencing biological aging, using DNA methylation data from over 40,000 individuals to identify genetic loci associated with epigenetic aging markers.
  • It identified 137 significant genetic loci, including 113 that were previously unknown, linked to various epigenetic clocks and related biological measurements.
  • The findings suggest a connection between genetic factors, lifestyle choices, and longevity, shedding light on the complex genetics of aging.
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DNA methylation age acceleration, the discrepancy between epigenetic age and chronological age, is associated with mortality and chronic diseases, including diabetes, hypertension, and hyperlipidemia. In this study, we investigate whether medications commonly used to treat these diseases in 15 drug categories are associated with four epigenetic age acceleration measures: HorvathAge acceleration (HorvathAA), HannumAge acceleration (HannumAA), PhenoAge acceleration, and GrimAge acceleration (GrimAA) using cross-sectional (Phase 1, N=1,100) and longitudinal (Phases 1 and 2, N=266) data from African Americans in the Genetic Epidemiology Network of Arteriopathy (GENOA) study. In cross-sectional analyses, the use of calcium channel blockers was associated with 1.

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