Determining chlorophyll-a thresholds for characterizing algal bloom conditions: An ocean colour remote sensing approach.

The Indian coast has been experiencing an increase in algal bloom events over the decades. Owing to the regional and seasonal dynamics of algal biomass (proxy: chlorophyll-a, hereafter chl-a), a multitude of thresholds of chl-a has been defined for different parts of the global seas to determine algal bloom conditions. However, no such clear definition is given for the Indian coastal waters.

Dissolved organic carbon (DOC) and labile organic compounds' spatial and temporal variations in coastal Indian groundwater: their bioavailability and transfer to neighboring coastal waters of India.

Submarine groundwater drainage (SGD) changes the elemental composition of the neighboring coastal ocean and impacts the biogeochemical cycles. To examine the seasonal and spatial variability in dissolved organic carbon (DOC) and labile organic compound biochemical compounds like dissolved carbohydrates (TDCHO), dissolved proteins (TDPRO), and dissolved free amino acid (TDFAA) concentrations during the dry and wet periods, groundwater samples were taken at 90 locations (180 samples) along the Indian coast. The mean DOC contents in Indian coastal groundwaters were more significant than the global mean values.

Identification of Immunodominant Epitopes of Dengue Virus 2 Envelope and NS1 Proteins: Evaluating the Diagnostic Potential of a Synthetic Peptide.

Background And Objective: Dengue is a major infectious disease with potential for outbreaks and epidemics. A specific and sensitive diagnosis is a prerequisite for clinical management of the disease. We designed our study to identify epitopes on the Dengue virus (DENV) envelope (E) and non-structural protein 1 (NS1) with potential for diagnosis.

Response of coastal phytoplankton to pollution from various sources in the coastal Bay of Bengal.

The coastal ocean receives nutrient pollutants from various sources, such as aerosols, municipal sewage, industrial effluents and groundwater discharge, with variable concentrations and stoichiometric ratios. The objective of this study is to examine the response of phytoplankton to these pollutants in the coastal water under silicate-rich and silicate-poor coastal waters. In order to achieve this, a microcosm experiment was conducted by adding the pollutants from various sources to the coastal waters during November and January, when the water column physicochemical characteristics are different.

Low-cost conventional PCR techniques enable simultaneous detection of bacterial sexually transmitted infections with enhanced sensitivity and specificity.

Purpose: Neisseria gonorrhoeae (NG), Chlamydia trachomatis (CT) and Mycoplasma hominis (MH), the three most common treatable bacterial sexually transmitted infections (STIs) worldwide can lead to many complications if remain untreated. Screening of high-risk population with highly sensitive methods will lead to significant improvement in patient outcomes and will prevent downward transmission. The advantages of Polymerase chain reaction (PCR) based assay are not only high sensitivity and specificity, but also detection of multiple organisms in a single reaction which reduce the result turn-around time.

Sea-surface pCO maps for the Bay of Bengal based on advanced machine learning algorithms.

Lack of sufficient observations has been an impediment for understanding the spatial and temporal variability of sea-surface pCO for the Bay of Bengal (BoB). The limited number of observations into existing machine learning (ML) products from BoB often results in high prediction errors. This study develops climatological sea-surface pCO maps using a significant number of open and coastal ocean observations of pCO and associated variables regulating pCO variability in BoB.

Major sources of sinking particulate organic matter in the western Bay of Bengal.

Impacts of river discharge on coastal ocean processes are multi-dimensional. Studies on sinking particle fluxes, composition and their seasonal variability in coastal oceans are very limited. In this study, we investigated the impact of river discharge on seasonal variability in sinking fluxes of total mass, biogenic and lithogenic material in a river-dominated continental margin, western coastal Bay of Bengal.

Scrub Typhus- An Underestimated Infectious Disease Attributable to Community Acquired Acute Kidney Injury.

Unlabelled: Acute Kidney Injury (AKI) associated with Scrub typhus is an emerging health problem which is more common in the tropics including India. This study intended to find out the occurrence of Scrub typhus among the Community Acquired Acute Kidney Injury patients in a tertiary care hospital in Assam, North East India. AKI patients with acute febrile illness admitted to Gauhati Medical College and Hospital, Guwahati, Assam were included in the study and demographic characteristics along with clinical features were recorded.

An integrated buoy-satellite based coastal water quality nowcasting system: India's pioneering efforts towards addressing UN ocean decade challenges.

The Indian coastal waters are stressed due to a multitude of factors, such as the discharge of industrial effluents, urbanization (municipal sewage), agricultural runoff, and river discharge. The coastal waters along the eastern and western seaboard of India exhibit contrasting characteristics in terms of seasonality, the magnitude of river influx, circulation pattern, and degree of anthropogenic activity. Therefore, understanding these processes and forecasting their occurrence is highly necessary to secure the health of coastal waters, habitats, marine resources, and the safety of tourists.

Human subcutaneous dirofilariasis: A diagnostic dilemma.

Human dirofilariasis is a rare infection caused by filarial worms of genus . Humans may be infected as aberrant (accidental) hosts, mainly by and . Most of the cases reported in India are of ocular dirofilariasis, with a few reports on subcutaneous dirofilariasis.

Prediction and design of protease enzyme specificity using a structure-aware graph convolutional network.

Site-specific proteolysis by the enzymatic cleavage of small linear sequence motifs is a key posttranslational modification involved in physiology and disease. The ability to robustly and rapidly predict protease-substrate specificity would also enable targeted proteolytic cleavage by designed proteases. Current methods for predicting protease specificity are limited to sequence pattern recognition in experimentally derived cleavage data obtained for libraries of potential substrates and generated separately for each protease variant.

Coupling between chromophoric dissolved organic matter and dissolved inorganic carbon in Indian estuaries.

This study investigates the coupling between Chromophoric Dissolved Organic Matter (CDOM) and Dissolved Inorganic Carbon (DIC) in eighteen Indian estuaries across salinity gradient of the east and west coasts during the monsoon season, characterized by significant river discharge. The hypothesis that humic acids (HA) and fulvic acids (FA), prominent in estuarine CDOM, closely correspond to the 'organic alkalinity' (A) component of total alkalinity is examined. In most estuaries, specifically those along the northeast coast (NE) and southwest coast (SW), a significant linear relationship exists between DIC, CDOM abundance, and pH level.

Purification and evaluation of 2, 4-di-tert butylphenol (DTBP) as a biocontrol agent against phyto-pathogenic fungi.

A fungal strain, Marasmiellus sp (PUK64), isolated from the mangrove forests in Muthupet, Tamil Nadu, East coast of India, along with others were screened for the search of potent bioactive compounds. A phenolic compound, 2,4-di-tert-butylphenol (DTBP), was isolated from the most promising strain PUK64 and its chemical structure was ascertained. DTBP demonstrated remarkable antifungal activity against the phytopathogenic fungi Aspergillus oryzae, Curvularia lunata and Fusarium verticillioides.

The Bay of Bengal exposes abundant photosynthetic picoplankton and newfound diversity along salinity-driven gradients.

The Bay of Bengal (BoB) is a 2,600,000 km expanse in the Indian Ocean upon which many humans rely. However, the primary producers underpinning food chains here remain poorly characterized. We examined phytoplankton abundance and diversity along strong BoB latitudinal and vertical salinity gradients-which have low temperature variation (27-29°C) between the surface and subsurface chlorophyll maximum (SCM).

Role of salinity on zooplankton assemblages in the tropical Indian estuaries during post monsoon.

The estuary is the transition zone between the riverine and marine environments, in which the zooplankton act as a trophic connector in the energy transfers from primary producers to secondary consumers. Zooplankton biovolume and species assemblages with reference to physical, chemical and biological properties in the Indian estuaries are rarely studied. To examine the zooplankton variability in abundance and diversity, we therefore, investigated seventeen Indian estuaries during the post monsoon of the year 2012.

Impact of ocean warming on net primary production in the northern Indian Ocean: role of aerosols and freshening of surface ocean.

Warming due to climate change stratifies the upper ocean and reduces nutrient input to the photic zone resulting in a decline in net primary production (NPP). On the other hand, climate change increases both anthropogenic aerosol input into the atmosphere and the river discharge due to the melting of glaciers on land resulting in enhanced nutrient inputs to the surface ocean and NPP. To examine the balance between these two processes, spatial and temporal variations in the rate of warming, NPP, aerosol optical depth (AOD), and sea surface salinity (SSS) were studied between 2001 and 2020 in the northern Indian Ocean.

Prediction and Design of Protease Enzyme Specificity Using a Structure-Aware Graph Convolutional Network.

Site-specific proteolysis by the enzymatic cleavage of small linear sequence motifs is a key post-translational modification involved in physiology and disease. The ability to robustly and rapidly predict protease substrate specificity would also enable targeted proteolytic cleavage - editing - of a target protein by designed proteases. Current methods for predicting protease specificity are limited to sequence pattern recognition in experimentally-derived cleavage data obtained for libraries of potential substrates and generated separately for each protease variant.

A pilot-scale sustainable biorefinery, integrating mushroom cultivation and in-situ pretreatment-cum-saccharification for ethanol production.

Biomass pretreatment incurs 40% of the overall cost of biorefinery operations. The usage of mushroom cultivation as a pretreatment/delignification technique, and bio-ethanol production from spent mushroom substrates, after subsequent pretreatment, saccharification and fermentation processes, have been reported earlier. However, the present pilot-scale, entirely-organic demonstration is one of the very first biorefinery models, which efficiently consolidates: biomass pretreatment; in-situ cellulase production and saccharification; mushroom cultivation, thereby improving the overall operational economy.

Confidence in COVID-19 vaccines moderates the association between vaccination status and mental distress.

Previous research has demonstrated that becoming vaccinated with the Coronavirus vaccine may lower mental distress. However, it remains uncertain whether this relationship holds amid concerns of vaccine side effects and doubts of the vaccine's protective capabilities. We presented three studies that showed how vaccine confidence negatively influences the relationship between vaccine uptake and mental distress.

Impact of atmospheric anthropogenic nitrogen on new production in the northern Indian Ocean: constrained based on satellite aerosol optical depth and particulate nitrogen levels.

Aerosols are one of the significant external sources of soluble reactive nitrogen to the surface ocean and their deposition affects the primary productivity. Owing to rapid industrialization over South and Southeast Asia, an increasing trend in atmospheric pollutants was observed over the northern Indian Ocean (NIO). To assess the contribution of the aeolian supply of inorganic nitrogen to the NIO, the available compositional data of marine aerosols collected over this basin between 2001 and 2020 were compiled.

Impact of atmospheric dry deposition of nutrients on phytoplankton pigment composition and primary production in the coastal Bay of Bengal.

Atmospheric deposition of pollutants decreases pH and increases the nutrient concentration in the surface water. To examine its impact on coastal phytoplankton composition and primary production, monthly atmospheric aerosol samples were mixed with coastal waters in the microcosm experiments. These experiments suggested that the biomass of Bacillariophyceae, Dinophyceae and Chlorophyceae were increased and primary production of the coastal waters increased by 3 to 19% due to the addition of aeolian nutrients.

2D-DIGE-Based Proteomic Profiling with Validations Identifies Vimentin as a Secretory Biomarker Useful for Early Detection and Poor Prognosis in Oral Cancers.

Oral tongue squamous cell carcinoma (OTSCC) is an aggressive cancer with high morbidity and mortality rates, despite multimodality management. There are currently no clinically relevant molecular markers that identify patients at higher risk of recurrence and failure. We undertook 2D-DIGE proteomic profiling to study the differentially expressed proteins in OTSCC evaluating their role in prognosis.

Improving vaccination intent among skeptics through confidence in governments' handling of the COVID-19 pandemic.

Scientific evidence suggests that individuals vaccinated with COVID-19 vaccines are less likely to require hospitalization, possibly lowering the burden on the healthcare system. Despite such benefits, substantial segments of the world's population remain skeptical of COVID-19 vaccines and are hesitant to take them. Even if such individuals have been inoculated with COVID-19 vaccines out of economic, social, or legal necessity, they may be less inclined to receive booster shots or vaccinate their offspring when such options become available.

Unraveling the sources of atmospheric organic aerosols over the Arabian Sea: Insights from the stable carbon and nitrogen isotopic composition.

The isotopic composition of stable carbon (δC) and nitrogen (δN) in marine aerosols influenced by the continental outflows are useful proxies for understanding the aging and secondary formation processes. Every winter, the haze pollutants transported from South Asia significantly affect the chemical composition of marine atmospheric boundary layer of the Arabian Sea. Here, we assessed the δC of total carbon (TC) and δN of total nitrogen (TN) in marine aerosols collected over the Arabian Sea during a winter cruise (6-24 December 2018).