Whole genome sequencing data used for surveillance of infections: detection of a large continuous outbreak, Denmark, 2019.

Background is one of the most frequent causes of bacterial gastroenteritis. outbreaks are rarely reported, which could be a reflection of a surveillance without routine molecular typing. We have previously shown that numerous small outbreak-like clusters can be detected when whole genome sequencing (WGS) data of clinical isolates was applied.

Whole-Genome Sequencing to Detect Numerous Campylobacter jejuni Outbreaks and Match Patient Isolates to Sources, Denmark, 2015-2017.

In industrialized countries, the leading cause of bacterial gastroenteritis is Campylobacter jejuni. However, outbreaks are rarely reported, which may reflect limitations of surveillance, for which molecular typing is not routinely performed. To determine the frequency of genetic clusters among patients and to find links to concurrent isolates from poultry meat, broiler chickens, cattle, pigs, and dogs, we performed whole-genome sequencing on 1,509 C.

Stimulation of the PD-1/PDL-1 T-cell co-inhibitory pathway is effective in treatment of experimental autoimmune glomerulonephritis.

Background: Experimental autoimmune glomerulonephritis (EAG) can be induced in Wistar-Kyoto (WKY) rats by immunization with the recombinant NC1 domain of the alpha 3 chain of type IV collagen [α3(IV)NC1]. EAG is characterized by circulating and deposited anti-α3(IV)NC1 antibodies, accompanied by focal necrotizing glomerulonephritis with crescent formation. Programmed death-1 (PD-1) receptor is preferentially expressed on activated T cells and binds two known ligands present on antigen presenting cells, PDL-1 and PDL-2.

Description of extended pre-harvest pig Salmonella surveillance-and-control programme and its estimated effect on food safety related to pork.

Salmonella in pork can be combated during pre- or post-harvest. For large slaughterhouses, post-harvest measures like decontamination might be cost-effective while this is less likely with small-to-medium sized slaughterhouses. In this study, pre-harvest measures might be more relevant.

Ultrafast studies of gold, nickel, and palladium nanorods.

Steady state and ultrafast transient absorption studies have been carried out for gold, nickel, and palladium high aspect ratio nanorods. For each metal, nanorods were fabricated by electrochemical deposition into approximately 6 microm thick polycarbonate templates. Two nominal pore diameters(10 and 30 nm, resulting in nanorod diameters of about 40 and 60 nm, respectively) were used, yielding nanorods with high aspect ratios (>25).

Vibrational spectroscopy and dynamics of azide ion in ionic liquid and dimethyl sulfoxide water mixtures.

Steady-state and time-resolved infrared spectroscopy of the azide (N(3)-) anion has been used to characterize aqueous mixtures both with the ionic liquid (IL) 1-butyl-3-methylimidazolium tetrafluoroborate ([BMIM][BF(4)]) and with dimethyl sulfoxide (DMSO). In the DMSO-water mixtures, two anion vibrational bands are observed for low water mole fractions (0 > X(w) > 0.25), which indicates a heterogeneous ion solvation environment.

Surfactant charge effects on the location, vibrational spectra, and relaxation dynamics of cyanoferrates in reverse micelles.

Ultrafast infrared spectroscopy has been used to measure vibrational energy relaxation (VER) and reorientation (Tr) times for the high frequency CN stretches of potassium ferrocyanide and ferricyanide and the NO stretch of sodium nitroprusside (SNP) in several reverse micelle (RM) systems using cationic, anionic, and nonionic surfactants. The confinement effects on anion vibrational spectra and dynamics in aqueous RMs depend on the charge of the surfactant that is used to form the RMs. Spectra and VER dynamics of ferrocyanide are not significantly altered in the limited number of RMs in which it could be solubilized.

Vibrational relaxation of azide in formamide reverse micelles.

Static and ultrafast infrared spectroscopy have been used to measure absorption spectra and vibrational energy relaxation (VER) times for the antisymmetric stretching vibrational band of azide, N(3)(-), in formamide-containing reverse micelles (RMs). RMs were formed in n-heptane using the surfactant AOT, sodium bis(2-ethylhexyl) sulfosuccinate. The VER times were found to be significantly longer than in bulk formamide.

A regional outbreak of S. Typhimurium in Denmark and identification of the source using MLVA typing.

In Denmark, as part of the national laboratory-based surveillance system of human enteric infections, all S. Typhimurium isolates are currently sub-typed using phage typing, antibiogram typing, and pulsed-field gel electrophoresis (PFGE). However, the discriminatory ability of PFGE is not always high enough to discriminate within certain phage types, and it is not always possible to separate unrelated and related isolates.

Photodetachment of ferrocyanide in reverse micelles.

Solvated electrons have been generated in reverse micelles (RMs) through photodetachment of ferrocyanide (Fe(CN)(6)(4-)) in sodium bis(2-ethylhexyl) sulfosuccinate (AOT) RMs. We have measured both bleach recovery of the parent ferrocyanide CN stretch in the infrared and the decay of the solvated electron absorption at 800 nm. The bleach recovery has been fit to a diffusion model for the geminate recombination process.

A regional outbreak of S. Typhimurium in Denmark and identification of the source using MLVA typing.

In Denmark, as part of the national laboratory-based surveillance system of human enteric infections, all S. Typhimurium isolates are currently sub-typed using phage typing, antibiogram typing, and pulsed-field gel electrophoresis (PFGE). However, the discriminatory ability of PFGE is not always high enough to discriminate within certain phage types, and it is not always possible to separate unrelated and related isolates.

Vibrational spectroscopy and dynamics of small anions in ionic liquid solutions.

Fourier-transform infrared (FTIR) and time-resolved IR spectroscopies have been used to study vibrational band positions, vibrational energy relaxation (VER) rates, and reorientation times of anions in several ionic liquid (IL) solutions. The ILs primarily investigated are based on the 1-butyl-2,3-dimethylimidazolium ([BM(2)IM]) cation with thiocyanate (NCS-), dicyanamide (N(CN)2-), and tetrafluoroborate (BF4-) anions. Spectroscopic studies are carried out near 2000 cm-1 for the C[Triple Bond]N stretching bands of NCS- and N(CN)2- as the IL anion as well as for NCS-, N(CN)2-, and azide (N3-) anions dissolved in [BM2IM][BF4].

Vibrational and rotational dynamics of cyanoferrates in solution.

Ultrafast infrared spectroscopy has been used to measure vibrational energy relaxation (VER) and reorientation (Tr) times for the high frequency vibrational bands of potassium ferrocyanide and ferricyanide (CN stretches), and sodium nitroprusside (SNP, CN, and NO stretches) in water and several other solvents. Relatively short VER times (4-43 ps) are determined for the hexacyano species and for the NO band of SNP, but the CN band of SNP relaxes much more slowly (55-365 ps). The solvent dependence of the VER times is similar for all the solutes and resembles what has been previously observed for triatomic molecular ions [Li et al.

Caveolin expression and localization in human keratinocytes suggest a role in lamellar granule biogenesis.

Lamellar granules are sphingolipid-enriched organelles, probably intimately related to the tubulo-vesicular elements of the trans-Golgi network, that deliver the precursors of stratum corneum barrier lipids to the extracellular compartment. Caveolins are cholesterol-binding scaffolding proteins that facilitate the assembly of cholesterol- and sphingolipid-enriched membrane domains known as caveolae. Similarities in the composition of lamellar granules and caveolae suggest that caveolins could be involved in lamellar granule assembly, trafficking, and/or function.

Resonance Raman and semiempirical electronic structure studies of an odd-electron dinickel tetraiminoethylenedimacrocycle complex.

Resonance Raman studies of Ni2TIED3+ (TIED = tetraiminoethylenedimacrocycle) reveal that many modes couple to the intense electronic transition centered at 725 nm, a feature that is nominally similar to the intense delocalized intervalence absorption bands observed in the same region for Fe2(TIED)L4(5+) and Ru2(TIED)L4(5+) (L is any of several axial ligands). Time-dependent spectral modeling of the Raman and absorption spectra for the nickel compound was undertaken to understand the electronic transition. We were unable to model the Raman and absorption spectra successfully with a single electronic transition, suggesting that the absorption band is made up of two overlapping transitions.

Lamellar granule biogenesis: a role for ceramide glucosyltransferase, lysosomal enzyme transport, and the Golgi.

Although lamellar granules are critical to the formation of the epidermal permeability barrier and are a known marker of late keratinocyte differentiation, very little is known about the physiologic regulators of lamellar granule assembly and extrusion. Ceramide glucosyltransferase (CGT), the enzyme responsible for the synthesis of lamellar granule glucosylceramides (GlcCer; the precursors of the stratum corneum ceramides), is localized to the Golgi apparatus in other cell types. We have found that CGT is induced during keratinocyte culture differentiation coincident with increased GlcCer content and the appearance of lamellar granules.

Induction of ceramide glucosyltransferase activity in cultured human keratinocytes. Correlation with culture differentiation.

Ceramides are the major component of the extracellular lipids that comprise the epidermal permeability barrier. They are derived from glucosylceramides (GlcCer) upon their extrusion from lamellar granules into the extracellular space in the upper layers of the epidermis. To better understand the regulation of the unique pathway for ceramide production in epidermis, we have studied the activity of the enzyme responsible for GlcCer synthesis, ceramide glucosyltransferase (CerGlc transferase), during keratinocyte culture differentiation.

Mutations at the lysosomal acid cholesteryl ester hydrolase gene locus in Wolman disease.

The genomic sequences encoding the human lysosomal acid lipase/cholesteryl esterase (sterol esterase; EC 3.1.1.

Cloning and expression of cDNA encoding human lysosomal acid lipase/cholesteryl ester hydrolase. Similarities to gastric and lingual lipases.

Molecular cloning of a full-length cDNA for human lysosomal acid lipase/cholesteryl ester hydrolase (EC 3.1.1.

Intercellular transport of lysosomal acid lipase mediates lipoprotein cholesteryl ester metabolism in a human vascular endothelial cell-fibroblast coculture system.

We present results from studies of human cell culture models to support the premise that the extracellular transport of lysosomal acid lipase has a function in lipoprotein cholesteryl ester metabolism in vascular tissue. Vascular endothelial cells secreted a higher fraction of cellular acid lipase than did smooth muscle cells and fibroblasts. Acid lipase and lysosomal beta-hexosaminidase were secreted at approximately the same rate from the apical and basolateral surface of an endothelial cell monolayer.

Decreased messenger RNA translation in herpesvirus-infected arterial cells: effects on cholesteryl ester hydrolase.

Herpes simplex viruses (HSVs) contain a function that can cause the degradation of host mRNA and mediate the shutoff of host protein synthesis. Previously, we observed that HSV infection causes a 40-fold increase in cholesteryl ester (CE) accretion in arterial smooth muscle cells due, in part, to a substantial decrease in CE hydrolysis. In studies reported herein, we found that HSV infection leads to reduced immunoprecipitable lysosomal (acid) CE hydrolase (ACEH) and beta-galactosidase, another lysosomal enzyme in vascular smooth muscle cells.

Lipid metabolism in xanthomatous skin of hypercholesterolemic rabbits.

The authors studied xanthomatous skin in cholesterol-fed rabbits for changes in lipid content and in activities of enzymes regulating intracellular lipid content. After 80 days of hypercholesterolemic diet, xanthomas were widespread and changes in lipid metabolism were marked. In both tissue homogenates and cell membrane pellets, unesterified cholesterol and phospholipids increased 2-fold to 6-fold, and cholesteryl esters increased about 30-fold.

Human lysosomal acid lipase/cholesteryl ester hydrolase. Purification and properties of the form secreted by fibroblasts in microcarrier culture.

Lysosomal acid lipase was purified to near homogeneity in a yield of 25-30% from secretions of human fibroblasts grown on microcarriers in spinner culture. Ammonium chloride was added to the serum-free medium to stimulate production of extracellular enzyme and minimize modifications, including proteolytic processing and destruction of the mannose 6-phosphate recognition marker, that have been associated with packaging and maturation of acid hydrolases in lysosomes. Chromatography of secretions by decyl-agarose, hydroxylapatite, phenylboronate-agarose, and gel filtration resulted in greater than 1500-fold purification of the lipase, representing a 10,000-fold increase above the specific activity of intracellular enzyme.

Adult Niemann-Pick disease masquerading as sea blue histiocyte syndrome: report of a case confirmed by lipid analysis and enzyme assays.

We present the clinical, pathologic, and metabolic findings of an adult woman with debilitating coronary artery disease and hepatosplenomegaly who was discovered to have multiorgan infiltration by sea blue histiocytes. A diagnosis of sea blue histiocyte (SBH) syndrome was made and no further workup performed. The patient suffered from progressive heart failure and sepsis following coronary artery bypass surgery and died 9 months after presentation.

Recognition and receptor-mediated endocytosis of the lysosomal acid lipase secreted by cultured human fibroblasts.

We have studied the recognition and uptake of acid lipase by human fibroblasts in order to determine requirements for localization and function of the enzyme in lysosomes. Our approach was based on evidence that a number of acid hydrolases involved in mucopolysaccharide metabolism are secreted from cultured fibroblasts and endocytosed by a phosphomannosyl-dependent, receptor-mediated process. Acid fatty acid ester hydrolase activity secreted from human fibroblasts was separable into two major forms by hydrophobic chromatography.