Publications by authors named "Samantha Savage"

BCR-ABL1 compound mutations can lead to resistance to ABL1 inhibitors in chronic myeloid leukemia (CML), which could be targeted by combining the ATP-site inhibitor ponatinib and the allosteric inhibitor asciminib. Here, we report the clinical validation of this approach in a CML patient, providing a basis for combination therapy to overcome such resistance.

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The Philadelphia chromosome (Ph) resulting from the t(9;22) translocation generates the oncogenic BCR::ABL1 fusion protein that is most commonly associated with chronic myeloid leukemia (CML) and Ph-positive (Ph+) acute lymphoblastic leukemia (ALL). There are also rare instances of patients (≤1%) with newly diagnosed acute myeloid leukemia (AML) that harbor this translocation (Paietta et al., 1881 [1998]; Keung et al.

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Acute myeloid leukemia (AML) is a cancer of myeloid-lineage cells with limited therapeutic options. We previously combined ex vivo drug sensitivity with genomic, transcriptomic, and clinical annotations for a large cohort of AML patients, which facilitated discovery of functional genomic correlates. Here, we present a dataset that has been harmonized with our initial report to yield a cumulative cohort of 805 patients (942 specimens).

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Purpose: Colony-stimulating factor-3 receptor ()-T618I is a recurrent activating mutation in chronic neutrophilic leukemia (CNL) and to a lesser extent in atypical chronic myeloid leukemia (aCML) resulting in constitutive JAK-STAT signaling. We sought to evaluate safety and efficacy of the JAK1/2 inhibitor ruxolitinib in patients with CNL and aCML, irrespective of mutation status.

Methods: We conducted a phase II study of ruxolitinib in 44 patients (21 CNL and 23 aCML).

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Chronic neutrophilic leukemia (CNL), atypical chronic myeloid leukemia (aCML), and myelodysplastic/myeloproliferative neoplasms, unclassifiable (MDS/MPN-U) are a group of rare and heterogeneous myeloid disorders. There is strong morphologic resemblance among these distinct diagnostic entities as well as a lack of specific molecular markers and limited understanding of disease pathogenesis, which has made diagnosis challenging in certain cases. The treatment has remained empirical, resulting in dismal outcomes.

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Article Synopsis
  • FLT3 mutations are common in AML and lead to a worse prognosis, but crenolanib, a powerful FLT3 inhibitor, shows effectiveness against certain mutations but leads to temporary responses before relapse.
  • Research indicates that crenolanib doesn’t create secondary FLT3 mutations, but instead, leads to new mutations in NRAS and IDH2, along with other changes in genes related to epigenetics and transcription in resistant cases.
  • Combining crenolanib with other drugs in tests may help overcome resistance and restore its effectiveness.
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  • The Beat AML program analyzed tumor specimens from 562 AML patients to examine complex mutations and drug responses using whole-exome and RNA sequencing.* -
  • The study discovered previously undetected mutations and identified how certain drug responses are linked to specific combinations of these mutations.* -
  • Findings, including gene expression signatures related to drug responses, are available through the Beat AML data viewer, enabling further research on AML biology.*
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Nasopharyngeal carcinoma (NPC) is an invasive cancer with particularly high incidence in Southeast Asia and Southern China. The pathogenic mechanisms of NPC, particularly those involving epigenetic dysregulation, remain largely elusive, hampering clinical management of this malignancy. To identify novel druggable targets, we carried out an unbiased high-throughput chemical screening and observed that NPC cells were highly sensitive to inhibitors of cyclin-dependent kinases (CDK), especially THZ1, a covalent inhibitor of CDK7.

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Article Synopsis
  • Researchers are tackling the challenge of developing effective treatments for cancers like acute myeloid leukemia (AML) by focusing on genetic and epigenetic diversity in tumor cells.
  • They conducted a study where they tested 122 patient samples against 48 different drug combinations, aiming to identify effective pairings that target different biological pathways.
  • The results indicated that certain drug combinations, particularly those involving BCL2 inhibitors, showed promising benefits in myeloid cancers, while others like PI3K and bromodomain inhibitors were more effective in lymphoid cancers, suggesting potential personalized treatment strategies.
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The recurrent V617F mutation in JAK2 (JAK2V617F) has emerged as the primary contributor to the pathogenesis of myeloproliferative neoplasms (MPN). However, the lack of complete response in most patients treated with the JAK1/2 inhibitor, ruxolitinib, indicates the need for identifying pathways that cooperate with JAK2. Activated JAK2 was found to be associated with the insulin receptor substrate 2 (IRS2) in non-hematological cells.

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Purpose: Colony-stimulating factor 3 receptor (CSF3R) mutations have been identified in the majority of chronic neutrophilic leukemia (CNL) and a smaller percentage of atypical chronic myeloid leukemia (aCML) cases. Although CSF3R point mutations (e.g.

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