Publications by authors named "Sachdeva R"

Background: Underground research laboratories (URLs) provide a window on the deep biosphere and enable investigation of potential microbial impacts on nuclear waste, CO and H stored in the subsurface. We carried out the first multi-year study of groundwater microbiomes sampled from defined intervals between 140 and 400 m below the surface of the Horonobe and Mizunami URLs, Japan.

Results: We reconstructed draft genomes for > 90% of all organisms detected over a four year period.

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Treatment options for non-small cell lung cancer (NSCLC) are evolving, given recent and expected approvals of immune checkpoint inhibitors (ICIs) targeting programmed cell death-(ligand) 1 (PD-1/PD-L1). We retrospectively evaluated outcomes among patients with resected stage IB-IIIA NSCLC tumors expressing PD-L1 using PALEOS (Pan-cAnadian Lung cancEr Observational Study) data (2016-2019). Key outcomes included PD-L1 expression rate and treatment patterns, recurrence, and median overall (mOS) and disease-free survival (mDFS) among PD-L1+ patients.

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Unlabelled: Borgs are huge extrachromosomal elements of anaerobic methane-oxidizing archaea. They exist in exceedingly complex microbiomes, lack cultivated hosts and have few protein functional annotations, precluding their classification as plasmids, viruses or other. Here, we used structure prediction methods to investigate potential roles for ∼10,000 Borg proteins.

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  • Autonomic dysfunctions significantly impact individuals after spinal cord injuries but are often overlooked compared to motor recovery.
  • The review focuses on understanding these dysfunctions through the lens of autonomic anatomy and physiology.
  • It aims to raise awareness and highlight relevant clinical data concerning autonomic issues post-SCI.
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  • The study aims to improve the diagnosis of Allergic Bronchopulmonary Aspergillosis (ABPA) by predicting specific B-cell epitopes using computer modeling and molecular docking techniques.
  • Researchers analyzed sequences from the Asp f allergens to identify IgE and IgG-specific epitopes, confirming strong interactions between these epitopes and IgE antibodies.
  • The findings suggest that this method could lead to better diagnostics and personalized treatment options for managing ABPA in the future.
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  • Asgard archaea, key ancestors of Eukaryotes, have mobile genetic elements (MGEs) that are not well understood, and this study investigates two complete genomes from the Atabeyarchaeia lineage to explore these elements.
  • The research identifies 18 MGEs in Atabeyarchaeia, including a notable 20.67 kbp circular plasmid and specific viruses that might influence their evolution through gene interactions.
  • Differences in defense mechanisms, such as restriction-modification systems, between Atabeyarchaeia and another Asgard archaea, Freyarchaeia, highlight how these systems can affect the relationship with MGEs and contribute to genetic diversity in these organisms.*
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  • The study investigates the cardiovascular dysfunction caused by spinal cord injury (SCI) and assesses the efficacy of four neuroprotective agents in aiding cardiovascular recovery.
  • Male Wistar rats were given spinal contusions and treated with Fluoxetine, Glyburide, Valproic acid, and Indomethacin, with outcomes measured through blood pressure changes, locomotor function, and lesion area.
  • The results showed that Indomethacin and Valproic acid led to high mortality rates, while Fluoxetine and Glyburide were tolerated, but none of the treatments significantly improved blood pressure control or locomotor function compared to the control group.
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  • Researchers investigated how machine learning could improve predicting cardiomyopathy risk in childhood cancer survivors using echocardiograms from multiple centers.
  • They designed deep convolutional neural networks (DCNNs) to analyze different sets of echocardiographic data and gauge model performance using standard metrics like F1-score and AUPRC.
  • Results showed that the DCNN effectively distinguished between survivors who developed cardiomyopathy and those who didn't, suggesting a potential tool for early prediction in at-risk patients.
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Purpose: Ependymomas are the third most common brain tumors in children. Standard of care is surgery followed by adjuvant radiation therapy. Controversy in the literature still exists over optimal radiation therapy dose.

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Hamartomas, a focal excess of normal tissue usually presenting as isolated masses, are rarely found in the head and neck region. The purpose of this report is to discuss a rare case of an intra-oral angioleiomyomatous hamartoma in a 14-year-old male who presented with a congenital nodule over the anterior palatal mucosa. The confirmatory diagnosis was done based on histopathology and immunohistochemistry using various markers.

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  • Scientists studied a group of tiny creatures called Asgard archaea to see how they affect soil ecosystems, especially in wetland soils.
  • They found two new genomes of these organisms and discovered that they can use different processes to break down substances.
  • The findings suggest that Asgard archaea could help with carbon cycling in the soil by breaking down materials without producing methane.
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Objective:  Risk stratification of fetuses diagnosed with congenital heart disease (CHD) helps provide a delivery plan and prepare families and medical teams on expected course in the delivery room. Our aim was to assess the accuracy of echocardiographically determined risk-stratification assignments in predicting postnatal cardiac outcomes beyond the delivery room.

Study Design:  This was a retrospective study at a single center evaluating all fetuses with CHD who were risk-stratified by echocardiographically determined level of care (LOC) assignment, ranging from 1a (lowest risk) to 4 (highest risk).

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Associations between Appropriate Use Criteria (AUC) ratings and medical decision-making in congenital heart disease are not well-established. We applied the 2020 AUC for multimodality imaging in follow-up care of pediatric and young adult patients with conotruncal defects to evaluate appropriateness of cardiac magnetic resonance (CMR) and computed tomography (CCT) use in this population and impact on clinical decision-making. Records were reviewed and assigned AUC indications and corresponding ratings for CMR and CCT.

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  • - Borgs are large extrachromosomal elements associated with "Candidatus Methanoperedens" archaea, and researchers used nanopore sequencing to validate and reconstruct genomes, revealing 13 complete and four near-complete genomes that share 40 key genes.
  • - These conserved genes helped identify new Borgs in peatland soil and map their evolutionary relationships, showing two main clades; importantly, Borg genes related to electron transfer and cell surface proteins are more highly expressed than those of the host.
  • - The study also reconstructed the first complete genome of a Methanoperedens thought to host Borgs, revealing unique methylation patterns that may help distinguish their genomes, and suggests that Borgs could exist independently from
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  • - Methanoperedens, a type of archaea, helps reduce methane emissions and hosts unique extrachromosomal genetic elements (ECEs) called Borgs, which influence their activity; however, the diversity of these ECEs has not been thoroughly explored.
  • - New research identifies small linear ECEs, circular viruses, and other unclassified ECEs associated with Methanoperedens, with linear ECEs sharing characteristics with Borgs, prompting the term "mini-Borgs."
  • - Mini-Borgs show significant genetic diversity across at least five groups and are linked to various Methanoperedens viruses, suggesting a complex network of genetic exchange that may affect the functioning and evolution of their host
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Background: Vitamin A deficiency (VAD) is a major public health problem in India, where approximately 62% of children under five have low retinol levels (< 70 µmol/L). This study aims to (1) evaluate vitamin A supplementation (VAS) and deworming (VAS + D) coverage in Nagaland state through government and civil society organization (CSO) partnerships, (2) examine socio-demographic barriers and facilitators to VAS + D coverage, (3) examine associations between socio-demographic characteristics and source of VAS coverage (i.e.

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Evidence from medicine and other fields has shown that gender diversity results in better decision making and outcomes. The incoming workforce of congenital heart specialists (especially in pediatric cardiology) appears to be more gender balanced, but past studies have shown many inequities. Gender-associated differences in leadership positions, opportunities presented for academic advancement, and recognition for academic contributions to the field persist.

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Unlabelled: Over the past few years, artificial intelligence (AI) has emerged as a powerful tool used to efficiently automate several tasks across multiple domains. Sleep medicine is perfectly positioned to leverage this tool due to the wealth of physiological signals obtained through sleep studies or sleep tracking devices and abundance of accessible clinical data through electronic medical records. However, caution must be applied when utilizing AI, due to intrinsic challenges associated with novel technology.

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Key Clinical Message: Filariasis may present as an isolated perinephric abscess. Hence, a high index of suspicion should be maintained in endemic settings.

Abstract: In cases with unexplained fever, eosinophilia and perinephric collection, it is necessary to do detailed infectious disease work up.

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Background: Despite the growing accessibility of web-based information related to spinal cord stimulation (SCS), the content and quality of commonly encountered websites remain unknown.

Objective: This study aimed to assess the content and quality of web-based information on SCS.

Methods: This qualitative study was prospectively registered in Open Science Framework.

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Since its regulatory approval over a half-century ago, botulinum toxin has evolved from one of the most potent neurotoxins known to becoming routinely adopted in clinical practice. Botulinum toxin, a highly potent neurotoxin produced by Clostridium botulinum, can cause botulism illness, characterized by widespread muscle weakness due to inhibition of acetylcholine transmission at neuromuscular junctions. The observation of botulinum toxin's anticholinergic properties led to the investigation of its potential benefits for conditions with an underlying etiology of cholinergic transmission, including autonomic nervous system dysfunction.

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Background: The complexity of congenital heart disease has been primarily stratified on the basis of surgical technical difficulty, specific diagnoses, and associated outcomes. We report on the refinement and validation of a pediatric echocardiography complexity (PEC) score.

Methods And Results: The American College of Cardiology Quality Network assembled a panel from 12 centers to refine a previously published PEC score developed in a single institution.

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