Publications by authors named "Sabine Petry"

Article Synopsis
  • Most vertebrate spindles utilize branching microtubule nucleation, where new microtubules form alongside existing ones.
  • The study highlights the role of hepatoma up-regulated protein (HURP) in this process, showing it is essential for RanGTP-induced microtubule branching in Xenopus egg extract.
  • HURP stabilizes the microtubule structure and shifts its function toward facilitating branching by localizing to TPX2 condensates, which are crucial for spindle assembly, supported by high-resolution cryo-EM imaging of HURP on microtubules.
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Microtubules are dynamic filaments that assemble spindles for eukaryotic cell division. As the concentration profiles of soluble tubulin and regulatory proteins are non-uniform during spindle assembly, we asked if diffusiophoresis - motion of particles under solute gradients - can act as a motorless transport mechanism for microtubules. We identify the migration of stable microtubules along cytoplasmic and higher concentration gradients of soluble tubulin, MgCl, Mg-ATP, Mg-GTP, and RanGTP at speeds O(100) nm/s, validating the diffusiophoresis hypothesis.

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It has become increasingly evident in recent years that nucleation of microtubules from a diverse set of MTOCs requires both the γ-tubulin ring complex (γ-TuRC) and the microtubule polymerase XMAP215. Despite their essentiality, little is known about how these nucleation factors interact and work together to generate microtubules. Using biochemical domain analysis of XMAP215 and structural approaches, we find that a sixth TOG domain in XMAP215 binds γ-TuRC γ-tubulin as part of a broader interaction involving the C-terminal region.

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Controllable platforms to engineer robust cytoskeletal scaffolds have the potential to create novel on-chip nanotechnologies. Inspired by axons, we combined the branching microtubule (MT) nucleation pathway with microfabrication to develop "cytoskeletal circuits." This active matter platform allows control over the adaptive self-organization of uniformly polarized MT arrays via geometric features of microstructures designed within a microfluidic confinement.

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Microtubules (MTs) perform essential functions in the cell, and it is critical that they are made at the correct cellular location and cell cycle stage. This nucleation process is catalyzed by the γ-tubulin ring complex (γ-TuRC), a cone-shaped protein complex composed of over 30 subunits. Despite recent insight into the structure of vertebrate γ-TuRC, which shows that its diameter is wider than that of a MT, and that it exhibits little of the symmetry expected for an ideal MT template, the question of how γ-TuRC achieves MT nucleation remains open.

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In large vertebrate spindles, the majority of microtubules are formed via branching microtubule nucleation, whereby microtubules nucleate along the side of pre-existing microtubules. Hepatoma up-regulated protein (HURP) is a microtubule-associated protein that has been implicated in spindle assembly, but its mode of action is yet to be defined. In this study, we show that HURP is necessary for RanGTP-induced branching microtubule nucleation in egg extract.

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Article Synopsis
  • Chromosome segregation during cell division is a highly coordinated process driven by the formation of the mitotic spindle, which is constructed afresh after interphase.
  • The γ-tubulin ring complex (γ-TuRC) plays a crucial role as a template for microtubule (MT) nucleation, needed for spindle assembly, but the precise timing and targeting of γ-TuRC to nucleation sites is still being studied.
  • Recent research has unveiled new MT nucleation effectors and their functions, offering insights into how various assembly pathways converge to form a functional spindle.
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Targeting protein for Xklp2 (TPX2) is a key factor that stimulates branching microtubule nucleation during cell division. Upon binding to microtubules (MTs), TPX2 forms condensates via liquid-liquid phase separation, which facilitates recruitment of microtubule nucleation factors and tubulin. We report the structure of the TPX2 C-terminal minimal active domain (TPX2) on the microtubule lattice determined by magic-angle-spinning NMR.

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Microtubules are generated at centrosomes, chromosomes, and within spindles during cell division. Whereas microtubule nucleation at the centrosome is well characterized, much remains unknown about where, when, and how microtubules are nucleated at chromosomes. To address these questions, we reconstitute microtubule nucleation from purified chromosomes in meiotic Xenopus egg extract and find that chromosomes alone can form spindles.

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Article Synopsis
  • Mitotic spindles rely on microtubules (MTs) that are regulated by Ran, which controls the release of spindle assembly factors (SAFs) and creates a biochemical gradient around chromosomes.
  • The augmin protein complex, essential for branching MT nucleation, interacts with importin-α and importin-β, with Ran affecting its localization and function in MT assembly.
  • This research uncovers how RanGTP regulates augmin's role in branching MT nucleation, enhancing our understanding of spindle assembly, even when the canonical SAF TPX2 is not involved.
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Accurate segregation of chromosomes is required to maintain genome integrity during cell division. This feat is accomplished by the microtubule-based spindle. To build a spindle rapidly and with high fidelity, cells take advantage of branching microtubule nucleation, which rapidly amplifies microtubules during cell division.

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The microtubule-based spindle orchestrates chromosome segregation during cell division. Following more than a century of study, many components and pathways contributing to spindle assembly have been described, but how the spindle robustly assembles remains incompletely understood. This process involves the self-organization of a large number of molecular parts - up to hundreds of thousands in vertebrate cells - whose local interactions give rise to a cellular-scale structure with emergent architecture, mechanics and function.

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The repeating arrangement of tubulin dimers confers great mechanical strength to microtubules, which are used as scaffolds for intracellular macromolecular transport in cells and exploited in biohybrid devices. The crystalline order in a microtubule, with lattice constants short enough to allow energy transfer between amino acid chromophores, is similar to synthetic structures designed for light harvesting. After photoexcitation, can these amino acid chromophores transfer excitation energy along the microtubule like a natural or artificial light-harvesting system? Here, we use tryptophan autofluorescence lifetimes to probe energy hopping between aromatic residues in tubulin and microtubules.

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To establish the microtubule cytoskeleton, the cell must tightly regulate when and where microtubules are nucleated. This regulation involves controlling the initial nucleation template, the γ-tubulin ring complex (γTuRC). Although γTuRC is present throughout the cytoplasm, its activity is restricted to specific sites including the centrosome and Golgi.

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Liquid-liquid phase separation and related phase transitions have emerged as generic mechanisms in living cells for the formation of membraneless compartments or biomolecular condensates. The surface between two immiscible phases has an interfacial tension, generating capillary forces that can perform work on the surrounding environment. Here we present the physical principles of capillarity, including examples of how capillary forces structure multiphase condensates and remodel biological substrates.

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Article Synopsis
  • - The microtubule (MT) cytoskeleton is vital for organizing cells and moving large molecules in the crowded cell environment, with the nucleation of new MTs being key to its function.
  • - Most MTs in the spindle are created through a process called branching MT nucleation, which increases MT numbers efficiently without needing complex organelles, making it easier to study.
  • - This review highlights new findings on branching factors, the mechanics of branching reactions, their regulation, and the role of branching MT nucleation in other cell systems and related diseases.
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The microtubule-based mitotic spindle is responsible for equally partitioning the genome during each cell division, and its assembly is executed via several microtubule nucleation pathways. Targeting Protein for XKlp2 (TPX2) stimulates the branching microtubule nucleation pathway, where new microtubules are nucleated from preexisting ones within mitotic or meiotic spindles. TPX2, like other spindle assembly factors, is sequestered by binding to nuclear importins-α/β until the onset of mitosis, yet the molecular nature of this regulation remains unclear.

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As one of four filament types, microtubules are a core component of the cytoskeleton and are essential for cell function. Yet how microtubules are nucleated from their building blocks, the αβ-tubulin heterodimer, has remained a fundamental open question since the discovery of tubulin 50 years ago. Recent structural studies have shed light on how γ-tubulin and the γ-tubulin complex proteins (GCPs) GCP2 to GCP6 form the γ-tubulin ring complex (γ-TuRC).

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The organization of microtubules (MTs) is critical for cells during interphase and mitosis. During mitotic spindle assembly, MTs are made and organized around chromosomes in a process regulated by RanGTP. The role of RanGTP has been explored in Xenopus egg extracts, which are not limited by a cell membrane.

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Article Synopsis
  • Understanding how microtubules (MTs) are formed is crucial for grasping the structure of the cytoskeleton, with the γ-tubulin ring complex (γ-TuRC) being the key nucleator identified, though its exact mechanism remains unclear.
  • A novel single molecule assay was created to visualize how γ-TuRC nucleates MTs, showing that it has a strong affinity for γ-/αβ-tubulin, allowing for more efficient assembly compared to spontaneous nucleation, which needs more tubulin units.
  • The study found that factors like NME7, TPX2, and the activation domain of CDK5RAP2 help γ-TuRC in nucleation, while XMAP215 significantly boosts efficiency
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Multifocal microscopy (MFM) offers high-speed three-dimensional imaging through the simultaneous image capture from multiple focal planes. Conventional MFM systems use a fabricated grating in the emission path for a single emission wavelength band and one set of focal plane separations. While a Spatial Light Modulator (SLM) can add more flexibility as a replacement to the fabricated grating, the relatively small number of pixels in the SLM chip, cross-talk between the pixels, and aberrations in the imaging system can produce non-uniform intensity in the different axially separated image planes.

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Phase separation of substrates and effectors is proposed to enhance biological reaction rates and efficiency. Targeting protein for Xklp2 (TPX2) is an effector of branching microtubule nucleation in spindles and functions with the substrate tubulin by an unknown mechanism. Here we show that TPX2 phase separates into a co-condensate with tubulin, which mediates microtubule nucleation in vitro and in isolated cytosol.

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Microtubules are nucleated from specific locations at precise times in the cell cycle. However, the factors that constitute these microtubule nucleation pathways and their mode of action still need to be identified. Using purified proteins we biochemically reconstitute branching microtubule nucleation, which is critical for chromosome segregation.

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