Publications by authors named "S von Otte"

Article Synopsis
  • Cells are crucial for studying health and diseases, but traditional models are limited in their ability to accurately represent cell function and behavior.
  • Advances in AI and omics technology enable the development of AI virtual cells (AIVCs), complex models that simulate molecular, cellular, and tissue behavior across various conditions.
  • The creation of AIVCs aims to enhance biological research by allowing detailed simulations, speeding up discoveries, and promoting collaborative and interdisciplinary approaches in open scientific research.
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The success of artificial intelligence (AI) algorithms in predicting protein structure and more recently, protein interactions, demonstrates the power and potential of machine learning and AI for advancing and accelerating biomedical research. As cells are the fundamental unit of life, applying these tools to understand and predict cellular function represents the next great challenge. However, given the complexity of cellular structure and function, the diversity of cell types and the dynamic plasticity of cell states, the task will not be easy.

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The structure of human memory seems to be optimized for efficient prediction, planning, and behavior. We propose that these capacities rely on a tripartite structure of memory that includes concepts, events, and contexts-three layers that constitute the mental world model. We suggest that the mechanism that critically increases adaptivity and flexibility is the tendency to contextualize.

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Scaling magnets down to where quantum size effects become prominent triggers quantum tunneling of magnetization (QTM), profoundly influencing magnetization dynamics. Measuring magnetization switching in an Fe atomic chain under a carefully tuned transverse magnetic field, we observe a nonmonotonic variation of magnetization lifetimes around a level crossing, known as the diabolic point (DP). Near DPs, local environment effects causing QTM are efficiently suppressed, enhancing lifetimes by three orders of magnitude.

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The cell is arguably the most fundamental unit of life and is central to understanding biology. Accurate modeling of cells is important for this understanding as well as for determining the root causes of disease. Recent advances in artificial intelligence (AI), combined with the ability to generate large-scale experimental data, present novel opportunities to model cells.

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